RNA–Protein interactions for RNA: ENST00000560541.5

CUX1-218, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 3,176 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-218ENST00000560541 A0A1B0GXF2 115 aa9.01□□□□□ -0.97
CUX1-218ENST00000560541 INS-IGF2F8WCM5 200 aa9.01□□□□□ -0.97
CUX1-218ENST00000560541 F11RQ9Y624 299 aaKnown RBP9.01□□□□□ -0.97
CUX1-218ENST00000560541 K7ERJ3 54 aa9□□□□□ -0.97
CUX1-218ENST00000560541 THBDP07204 575 aa9□□□□□ -0.97
CUX1-218ENST00000560541 RPL27AP46776 148 aaKnown RBP9□□□□□ -0.97
CUX1-218ENST00000560541 KLF5Q13887 457 aaPredicted RBP9□□□□□ -0.97
CUX1-218ENST00000560541 PRSS33Q8NF86 280 aa9□□□□□ -0.97
CUX1-218ENST00000560541 RABAC1Q9UI14 185 aa9□□□□□ -0.97
CUX1-218ENST00000560541 OR2J3O76001 311 aa9□□□□□ -0.97
CUX1-218ENST00000560541 TCRAP04437 139 aa9□□□□□ -0.97
CUX1-218ENST00000560541 IGHV1-8P0DP01 117 aa9□□□□□ -0.97
CUX1-218ENST00000560541 GP9P14770 177 aa9□□□□□ -0.97
CUX1-218ENST00000560541 FAM57AQ8TBR7 257 aa9□□□□□ -0.97
CUX1-218ENST00000560541 IGFBPL1Q8WX77 278 aa9□□□□□ -0.97
CUX1-218ENST00000560541 DAZAP1Q96EP5 407 aaKnown RBP9□□□□□ -0.97
CUX1-218ENST00000560541 ABHD17AQ96GS6 310 aa9□□□□□ -0.97
CUX1-218ENST00000560541 MLST8Q9BVC4 326 aa9□□□□□ -0.97
CUX1-218ENST00000560541 DYNLRB1Q9NP97 96 aa9□□□□□ -0.97
CUX1-218ENST00000560541 LYNX1G3V0Z9 82 aa9□□□□□ -0.97
CUX1-218ENST00000560541 CSN3P07498 182 aa9□□□□□ -0.97
CUX1-218ENST00000560541 LYNX1P0DP58 116 aa9□□□□□ -0.97
CUX1-218ENST00000560541 AMTNQ6UX39 209 aa9□□□□□ -0.97
CUX1-218ENST00000560541 PRNTQ86SH4 94 aa9□□□□□ -0.97
CUX1-218ENST00000560541 SYT8Q8NBV8 401 aa9□□□□□ -0.97
CUX1-218ENST00000560541 IGFL3Q6UXB1 125 aa8.99□□□□□ -0.97
CUX1-218ENST00000560541 C3orf56Q8N813 242 aa8.99□□□□□ -0.97
CUX1-218ENST00000560541 TEX45Q8NA69 505 aa8.99□□□□□ -0.97
CUX1-218ENST00000560541 PPDPFQ9H3Y8 114 aa8.99□□□□□ -0.97
CUX1-218ENST00000560541 IGHV1-24A0A0C4DH33 117 aa8.99□□□□□ -0.97
CUX1-218ENST00000560541 TMEM189A5PLL7 270 aa8.99□□□□□ -0.97
CUX1-218ENST00000560541 A8MWL6 223 aa8.99□□□□□ -0.97
CUX1-218ENST00000560541 HLA-DRB1P01911 266 aa8.99□□□□□ -0.97
CUX1-218ENST00000560541 COX7A1P24310 79 aa8.99□□□□□ -0.97
CUX1-218ENST00000560541 COL8A1P27658 744 aa8.99□□□□□ -0.97
CUX1-218ENST00000560541 GOLT1AQ6ZVE7 132 aa8.99□□□□□ -0.97
CUX1-218ENST00000560541 ATP5L2Q7Z4Y8 100 aa8.99□□□□□ -0.97
CUX1-218ENST00000560541 C18orf15Q96N68 181 aa8.99□□□□□ -0.97
CUX1-218ENST00000560541 ASH1LQ9NR48 2969 aaKnown RBP8.99□□□□□ -0.97
CUX1-218ENST00000560541 KLF12Q9Y4X4 402 aa8.99□□□□□ -0.97
CUX1-218ENST00000560541 KLK10O43240 276 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 LEPROTL1O95214 131 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 LTAP01374 205 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 RBP4P02753 201 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 PRTN3P24158 256 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 DLX6P56179 175 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 TMEM155Q4W5P6 130 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 FAM120AOSQ5T036 256 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 TRGV9Q99603 122 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 FBXL15Q9H469 300 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 ARHGAP32A7KAX9 2087 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 MED13LQ71F56 2210 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 RNASE6Q93091 150 aaKnown RBP8.98□□□□□ -0.97
CUX1-218ENST00000560541 PRSS22Q9GZN4 317 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 TMEM133Q9H2Q1 129 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 S4R3C0 116 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 H3BMG7 143 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 LINC00311Q8N616 119 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 FMC1Q96HJ9 113 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 C17orf77Q96MU5 243 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 TPPP3Q9BW30 176 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 HIGD1AQ9Y241 93 aa8.98□□□□□ -0.97
CUX1-218ENST00000560541 CACNA1BQ00975 2339 aa8.97□□□□□ -0.97
CUX1-218ENST00000560541 C19orf71A6NCJ1 209 aa8.97□□□□□ -0.97
CUX1-218ENST00000560541 C8orf46Q8TAG6 207 aa8.97□□□□□ -0.97
CUX1-218ENST00000560541 SIGLEC9Q9Y336 463 aa8.97□□□□□ -0.97
CUX1-218ENST00000560541 INSIG2Q9Y5U4 225 aa8.97□□□□□ -0.97
CUX1-218ENST00000560541 WNK2Q9Y3S1 2297 aa8.97□□□□□ -0.97
CUX1-218ENST00000560541 TRBV20-1A0A075B6N2 111 aa8.97□□□□□ -0.97
CUX1-218ENST00000560541 PRRG2O14669 202 aa8.97□□□□□ -0.97
CUX1-218ENST00000560541 COX8AP10176 69 aa8.97□□□□□ -0.97
CUX1-218ENST00000560541 PLGLAQ15195 96 aa8.97□□□□□ -0.97
CUX1-218ENST00000560541 FOXI2Q6ZQN5 318 aa8.97□□□□□ -0.97
CUX1-218ENST00000560541 RBPMS2Q6ZRY4 209 aaKnown RBP8.97□□□□□ -0.97
CUX1-218ENST00000560541 VGLL1Q99990 258 aa8.97□□□□□ -0.97
CUX1-218ENST00000560541 CYSLTR1Q9Y271 337 aa8.97□□□□□ -0.97
CUX1-218ENST00000560541 CCDC179H3BU77 68 aa8.96□□□□□ -0.97
CUX1-218ENST00000560541 TNFRSF13BO14836 293 aaPredicted RBP8.96□□□□□ -0.97
CUX1-218ENST00000560541 GCSHP23434 173 aa8.96□□□□□ -0.97
CUX1-218ENST00000560541 XGP55808 180 aa8.96□□□□□ -0.97
CUX1-218ENST00000560541 Q86TA4 180 aa8.96□□□□□ -0.97
CUX1-218ENST00000560541 GLMPQ8WWB7 406 aa8.96□□□□□ -0.97
CUX1-218ENST00000560541 A0A1W2PRD5 423 aa8.96□□□□□ -0.98
CUX1-218ENST00000560541 A0A1W2PRF3 423 aa8.96□□□□□ -0.98
CUX1-218ENST00000560541 A0A1W2PRM7 423 aa8.96□□□□□ -0.98
CUX1-218ENST00000560541 PPP1R27Q86WC6 154 aa8.96□□□□□ -0.98
CUX1-218ENST00000560541 SLC25A39Q9BZJ4 359 aaPredicted RBP8.96□□□□□ -0.98
CUX1-218ENST00000560541 ANKHD1Q8IWZ3 2542 aaKnown RBP8.96□□□□□ -0.98
CUX1-218ENST00000560541 PRSS29PA6NIE9 313 aa8.96□□□□□ -0.98
CUX1-218ENST00000560541 IGHV1-3A0A0C4DH29 117 aa8.95□□□□□ -0.98
CUX1-218ENST00000560541 A0A1B0GWB2 263 aa8.95□□□□□ -0.98
CUX1-218ENST00000560541 TEX22C9J3V5 150 aa8.95□□□□□ -0.98
CUX1-218ENST00000560541 E7EQL1 145 aa8.95□□□□□ -0.98
CUX1-218ENST00000560541 SRSF12Q8WXF0 261 aaKnown RBP8.95□□□□□ -0.98
CUX1-218ENST00000560541 ZNF562Q6V9R5 426 aa8.95□□□□□ -0.98
CUX1-218ENST00000560541 RASL11BQ9BPW5 248 aa8.95□□□□□ -0.98
CUX1-218ENST00000560541 IGLV2-11P01706 119 aa8.94□□□□□ -0.98
CUX1-218ENST00000560541 ARMS2P0C7Q2 107 aa8.94□□□□□ -0.98
CUX1-218ENST00000560541 RAB1BQ9H0U4 201 aa8.94□□□□□ -0.98
CUX1-218ENST00000560541 KLF17Q5JT82 389 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms