RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 ZFP69Q49AA0 526 aa7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 LYZL2Q7Z4W2 148 aa7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 CCDC28AQ8IWP9 274 aa7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 TCTE3Q8IZS6 198 aa7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 ASB13Q8WXK3 278 aa7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 FRZBQ92765 325 aa7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 IL22RA2Q969J5 263 aa7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 KRTAP1-5Q9BYS1 174 aa7.29□□□□□ -1.24
CDC42BPB-207ENST00000560492 HERC1Q15751 4861 aa7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 GAGE12BA1L429 117 aa7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 PLAC8L1A1L4L8 177 aa7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 SNURFLB1AK76 121 aa7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 GAGE7O76087 117 aa7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 SIX6O95475 246 aa7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 GAGE12FP0CL80 117 aa7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 GAGE12GP0CL81 117 aa7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 GAGE12IP0CL82 117 aa7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 FUSP35637 526 aaKnown RBP eCLIP7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 ATP5IP56385 69 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 CYCSP99999 105 aaKnown RBP7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 OR4D5Q8NGN0 318 aa7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 RXFP4Q8TDU9 374 aa7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 ST6GAL2Q96JF0 529 aa7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPB-207ENST00000560492 IGKV1OR2-108A0A075B7D4 117 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 TRAV8-2A0A0B4J237 113 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 DUXBA0A1W2PPF3 345 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 J3KRW8 73 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 WRBO00258 174 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 RLN2P04090 185 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 OR5G3P0C626 314 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 BTF3P20290 206 aaKnown RBP7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 LINC00315P59091 139 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 ERVFC1-1P60608 527 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 RPP30P78346 268 aaKnown RBP7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 CD300CQ08708 224 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 ESRGQ1W209 222 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 LCE1DQ5T752 114 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 Q5VSD8 79 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 ZNF493Q6ZR52 646 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 THAP8Q8NA92 274 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 OR8A1Q8NGG7 326 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 OR2T35Q8NGX2 323 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 TMEM263Q8WUH6 116 aaKnown RBP7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 KRTAP4-7Q9BYR0 210 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 SLC45A2Q9UMX9 530 aa7.27□□□□□ -1.25
CDC42BPB-207ENST00000560492 DNAH5Q8TE73 4624 aa7.26□□□□□ -1.25
CDC42BPB-207ENST00000560492 A0A1W2PPQ1 181 aa7.26□□□□□ -1.25
CDC42BPB-207ENST00000560492 SMLR1H3BR10 107 aa7.26□□□□□ -1.25
CDC42BPB-207ENST00000560492 MED6O75586 246 aa7.26□□□□□ -1.25
CDC42BPB-207ENST00000560492 IFNA5P01569 189 aa7.26□□□□□ -1.25
CDC42BPB-207ENST00000560492 RPL7P18124 248 aaKnown RBP7.26□□□□□ -1.25
CDC42BPB-207ENST00000560492 CDKN1BP46527 198 aa7.26□□□□□ -1.25
CDC42BPB-207ENST00000560492 H2BFSP57053 126 aa7.26□□□□□ -1.25
CDC42BPB-207ENST00000560492 IAH1Q2TAA2 248 aaPredicted RBP7.26□□□□□ -1.25
CDC42BPB-207ENST00000560492 LRTM2Q8N967 370 aa7.26□□□□□ -1.25
CDC42BPB-207ENST00000560492 GSKIPQ9P0R6 139 aa7.26□□□□□ -1.25
CDC42BPB-207ENST00000560492 HIGD1AQ9Y241 93 aa7.26□□□□□ -1.25
CDC42BPB-207ENST00000560492 MRPS16Q9Y3D3 137 aaKnown RBP7.26□□□□□ -1.25
CDC42BPB-207ENST00000560492 H3BP45 60 aa7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 H3BRN7 92 aa7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 H7BYZ3 331 aa7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 SCGB1D2O95969 90 aa7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 C1QBP02746 253 aa7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 PET100P0DJ07 73 aa7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 S100A10P60903 97 aa7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 PSG3Q16557 428 aa7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 LRRC37A5PQ49AS3 106 aa7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 SPANXN5Q5MJ07 72 aa7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 RNASE8Q8TDE3 154 aaKnown RBP7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 RPUSD4Q96CM3 377 aaKnown RBP7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 C2orf50Q96LR7 162 aa7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 C17orf77Q96MU5 243 aa7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 CIB3Q96Q77 187 aaPredicted RBP7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 UPK3BQ9BT76 320 aa7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 NMES1Q9C002 83 aa7.25□□□□□ -1.25
CDC42BPB-207ENST00000560492 FXYD6-FXYD2A0A087WZ82 144 aa7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 SIVA1O15304 175 aa7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 HYPMO75409 117 aa7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 HOXA5P20719 270 aa7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 TMEM182Q6ZP80 229 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 CYP2G1PQ6ZSU1 146 aa7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 ACOT7LQ6ZUV0 252 aa7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 S100A7AQ86SG5 101 aa7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 LYPD1Q8N2G4 141 aa7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 THAP6Q8TBB0 222 aa7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 PPP1R1CQ8WVI7 109 aa7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 ZNF503Q96F45 646 aa7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 HYLS1Q96M11 299 aa7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 PARD6GQ9BYG4 376 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 TMPRSS5Q9H3S3 457 aa7.24□□□□□ -1.25
CDC42BPB-207ENST00000560492 TRGV2A0A075B6R0 118 aa7.23□□□□□ -1.25
CDC42BPB-207ENST00000560492 SYNGR2O43760 224 aa7.23□□□□□ -1.25
CDC42BPB-207ENST00000560492 SMR3BP02814 79 aaPredicted RBP7.23□□□□□ -1.25
CDC42BPB-207ENST00000560492 SNRPCP09234 159 aaKnown RBP7.23□□□□□ -1.25
CDC42BPB-207ENST00000560492 LINC00869P0C866 280 aa7.23□□□□□ -1.25
CDC42BPB-207ENST00000560492 ZBTB8BQ8NAP8 495 aaPredicted RBP7.23□□□□□ -1.25
CDC42BPB-207ENST00000560492 SHANK2-AS3Q9BTD1 123 aa7.23□□□□□ -1.25
CDC42BPB-207ENST00000560492 STRAPQ9Y3F4 350 aaKnown RBP7.23□□□□□ -1.25
CDC42BPB-207ENST00000560492 SLC25A6P12236 298 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms