RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 NDUFB4O95168 129 aa8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 SLC25A5P05141 298 aaKnown RBP8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 OR10J4P0C629 311 aa8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 ARL14EPLP0DKL9 152 aa8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 RPL35AP18077 110 aaKnown RBP8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 TSPOP30536 169 aa8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 OR4B1Q8NGF8 309 aa8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 CMTM2Q8TAZ6 248 aa8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 LINC00477Q96M19 166 aa8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 RCHY1Q96PM5 261 aa8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 ODF3Q96PU9 254 aa8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 OTORQ9NRC9 128 aa8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 PPP1R14DQ9NXH3 145 aa8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 RFNGQ9Y644 331 aa8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 ARL2-SNX15V9GYD0 113 aa8.87□□□□□ -0.99
RABGGTA-215ENST00000560207 TRBV7-9A0A0J9YWB2 115 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 A0A1W2PRE2 83 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 RBAKDNA6NC62 111 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 KNCNA6PVL3 124 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 K7EQM0 130 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 SLC17A3O00476 420 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 SPRY2O43597 315 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 NMBP08949 121 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 GCHFRP30047 84 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 RANP62826 216 aaKnown RBP8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 RNF182Q8N6D2 247 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 MBD3L1Q8WWY6 194 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 RNF183Q96D59 192 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 ZNF503Q96F45 646 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 C20orf173Q96LM9 149 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 TCEAL7Q9BRU2 100 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 U3KQK5 164 aa8.86□□□□□ -0.99
RABGGTA-215ENST00000560207 MAP1LC3B2A6NCE7 125 aa8.85□□□□□ -0.99
RABGGTA-215ENST00000560207 CA1P00915 261 aaPredicted RBP8.85□□□□□ -0.99
RABGGTA-215ENST00000560207 CNN1P51911 297 aaKnown RBP8.85□□□□□ -0.99
RABGGTA-215ENST00000560207 HIST1H1AQ02539 215 aaPredicted RBP8.85□□□□□ -0.99
RABGGTA-215ENST00000560207 ICAM4Q14773 271 aa8.85□□□□□ -0.99
RABGGTA-215ENST00000560207 ZNF124Q15973 351 aa8.85□□□□□ -0.99
RABGGTA-215ENST00000560207 TMED6Q8WW62 240 aa8.85□□□□□ -0.99
RABGGTA-215ENST00000560207 C20orf144Q9BQM9 153 aa8.85□□□□□ -0.99
RABGGTA-215ENST00000560207 MAP1LC3BQ9GZQ8 125 aa8.85□□□□□ -0.99
RABGGTA-215ENST00000560207 Q9H3A6 140 aa8.85□□□□□ -0.99
RABGGTA-215ENST00000560207 LENEPQ9Y5L5 61 aa8.85□□□□□ -0.99
RABGGTA-215ENST00000560207 TRAV1-1A0A0B4J248 108 aa8.84□□□□□ -0.99
RABGGTA-215ENST00000560207 SMIM9A6NGZ8 99 aa8.84□□□□□ -0.99
RABGGTA-215ENST00000560207 NPIPB6E9PJ23 425 aa8.84□□□□□ -0.99
RABGGTA-215ENST00000560207 HBE1P02100 147 aa8.84□□□□□ -0.99
RABGGTA-215ENST00000560207 H2AFB1P0C5Y9 115 aa8.84□□□□□ -0.99
RABGGTA-215ENST00000560207 SULT1A2P50226 295 aa8.84□□□□□ -0.99
RABGGTA-215ENST00000560207 TMEM78Q5T7P6 136 aa8.84□□□□□ -0.99
RABGGTA-215ENST00000560207 C9orf47Q6ZRZ4 202 aa8.84□□□□□ -0.99
RABGGTA-215ENST00000560207 C5orf17Q8NAS9 161 aa8.84□□□□□ -0.99
RABGGTA-215ENST00000560207 ASCL2Q99929 193 aa8.84□□□□□ -0.99
RABGGTA-215ENST00000560207 PGPA6NDG6 321 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 H3BTX0 84 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 BOLA2-SMG1P6H3BVE0 249 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 TAGLN2P37802 199 aaKnown RBP8.83□□□□□ -1
RABGGTA-215ENST00000560207 LEPP41159 167 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 CDKN1BP46527 198 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 FHITP49789 147 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 GDF5OSQ5U4N7 250 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 IGFL4Q6B9Z1 124 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 TMEM256Q8N2U0 113 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 EXOC3-AS1Q8N2X6 119 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 IL17DQ8TAD2 202 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 FAM213BQ8TBF2 198 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 SFT2D1Q8WV19 159 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 TXNDC17Q9BRA2 123 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 GOLT1BQ9Y3E0 138 aa8.83□□□□□ -1
RABGGTA-215ENST00000560207 F6UB75 175 aa8.82□□□□□ -1
RABGGTA-215ENST00000560207 F6UZH7 168 aa8.82□□□□□ -1
RABGGTA-215ENST00000560207 HMGB3O15347 200 aaKnown RBP8.82□□□□□ -1
RABGGTA-215ENST00000560207 INSP01308 110 aa8.82□□□□□ -1
RABGGTA-215ENST00000560207 SNRPCP09234 159 aaKnown RBP8.82□□□□□ -1
RABGGTA-215ENST00000560207 BLOC1S1P78537 153 aa8.82□□□□□ -1
RABGGTA-215ENST00000560207 CD300CQ08708 224 aa8.82□□□□□ -1
RABGGTA-215ENST00000560207 ZNF726P1Q15940 193 aa8.82□□□□□ -1
RABGGTA-215ENST00000560207 DEFB135Q30KP9 77 aa8.82□□□□□ -1
RABGGTA-215ENST00000560207 AMTNQ6UX39 209 aa8.82□□□□□ -1
RABGGTA-215ENST00000560207 IQCF2Q8IXL9 164 aa8.82□□□□□ -1
RABGGTA-215ENST00000560207 IGF2BP2-AS1Q96M15 143 aa8.82□□□□□ -1
RABGGTA-215ENST00000560207 NEU1Q99519 415 aa8.82□□□□□ -1
RABGGTA-215ENST00000560207 RARRES2Q99969 163 aa8.82□□□□□ -1
RABGGTA-215ENST00000560207 OVOL2Q9BRP0 275 aa8.82□□□□□ -1
RABGGTA-215ENST00000560207 ZNF705FA8MVS1 300 aaPredicted RBP8.81□□□□□ -1
RABGGTA-215ENST00000560207 DIRC3C9JPN6 131 aa8.81□□□□□ -1
RABGGTA-215ENST00000560207 M0R3E3 92 aa8.81□□□□□ -1
RABGGTA-215ENST00000560207 MIFP14174 115 aa8.81□□□□□ -1
RABGGTA-215ENST00000560207 HLA-DMBP28068 263 aa8.81□□□□□ -1
RABGGTA-215ENST00000560207 PMS2P11Q13670 270 aa8.81□□□□□ -1
RABGGTA-215ENST00000560207 CSNK1G2-AS1Q8NCQ2 148 aa8.81□□□□□ -1
RABGGTA-215ENST00000560207 HIST1H2BAQ96A08 127 aa8.81□□□□□ -1
RABGGTA-215ENST00000560207 MANBALQ9NQG1 85 aa8.81□□□□□ -1
RABGGTA-215ENST00000560207 TGP01266 2768 aa8.8□□□□□ -1
RABGGTA-215ENST00000560207 TMEM189A5PLL7 270 aa8.8□□□□□ -1
RABGGTA-215ENST00000560207 ZNF705EA8MWA4 302 aaPredicted RBP8.8□□□□□ -1
RABGGTA-215ENST00000560207 IFNA1P01562 189 aa8.8□□□□□ -1
RABGGTA-215ENST00000560207 IGKV3-20P01619 116 aa8.8□□□□□ -1
RABGGTA-215ENST00000560207 ZNF138P52744 262 aa8.8□□□□□ -1
RABGGTA-215ENST00000560207 SUMO1P63165 101 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms