RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 TMEM144Q7Z5S9 345 aa8.76□□□□□ -1.01
RABGGTA-213ENST00000560127 OR8I2Q8N0Y5 310 aa8.76□□□□□ -1.01
RABGGTA-213ENST00000560127 NOP10Q9NPE3 64 aaKnown RBP8.76□□□□□ -1.01
RABGGTA-213ENST00000560127 TIMM8BQ9Y5J9 83 aaPredicted RBP8.76□□□□□ -1.01
RABGGTA-213ENST00000560127 ALG5Q9Y673 324 aa8.76□□□□□ -1.01
RABGGTA-213ENST00000560127 PTTG1O95997 202 aa8.75□□□□□ -1.01
RABGGTA-213ENST00000560127 S100A10P60903 97 aa8.75□□□□□ -1.01
RABGGTA-213ENST00000560127 RPP30P78346 268 aaKnown RBP8.75□□□□□ -1.01
RABGGTA-213ENST00000560127 SERTAD4-AS1Q5TG53 156 aa8.75□□□□□ -1.01
RABGGTA-213ENST00000560127 SAMD13Q5VXD3 122 aa8.75□□□□□ -1.01
RABGGTA-213ENST00000560127 LINC00612Q8N6U2 182 aa8.75□□□□□ -1.01
RABGGTA-213ENST00000560127 C16orf74Q96GX8 76 aa8.75□□□□□ -1.01
RABGGTA-213ENST00000560127 LINC01587Q99440 93 aa8.75□□□□□ -1.01
RABGGTA-213ENST00000560127 GPN1Q9HCN4 374 aaPredicted RBP8.75□□□□□ -1.01
RABGGTA-213ENST00000560127 LYRM2Q9NU23 88 aaPredicted RBP8.75□□□□□ -1.01
RABGGTA-213ENST00000560127 OR5AC2Q9NZP5 309 aa8.75□□□□□ -1.01
RABGGTA-213ENST00000560127 FNDC10F2Z333 226 aa8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 H3BNG1 76 aa8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 CST7O76096 145 aa8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 DUSP14O95147 198 aaKnown RBP8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 HTN1P15515 57 aa8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 CXCL3P19876 107 aa8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 GCSHP23434 173 aa8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 MEOX2P50222 304 aa8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 TAS2R60P59551 318 aa8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 LYZP61626 148 aa8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 AKR1C1Q04828 323 aa8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 SLC38A11Q08AI6 406 aa8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 TMEM256Q8N2U0 113 aa8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 OR10J6PQ8NGY7 276 aa8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 SLC25A39Q9BZJ4 359 aaPredicted RBP8.74□□□□□ -1.01
RABGGTA-213ENST00000560127 PKHD1L1Q86WI1 4243 aa8.73□□□□□ -1.01
RABGGTA-213ENST00000560127 SMCO3A2RU48 225 aa8.73□□□□□ -1.01
RABGGTA-213ENST00000560127 VWC2Q2TAL6 325 aa8.73□□□□□ -1.01
RABGGTA-213ENST00000560127 IGFL4Q6B9Z1 124 aa8.73□□□□□ -1.01
RABGGTA-213ENST00000560127 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.73□□□□□ -1.01
RABGGTA-213ENST00000560127 CYP2G1PQ6ZSU1 146 aa8.73□□□□□ -1.01
RABGGTA-213ENST00000560127 TMEM252Q8N6L7 170 aa8.73□□□□□ -1.01
RABGGTA-213ENST00000560127 RNASE8Q8TDE3 154 aaKnown RBP8.73□□□□□ -1.01
RABGGTA-213ENST00000560127 PPP1R14BQ96C90 147 aa8.73□□□□□ -1.01
RABGGTA-213ENST00000560127 MGST2Q99735 147 aa8.73□□□□□ -1.01
RABGGTA-213ENST00000560127 RSG1Q9BU20 258 aa8.73□□□□□ -1.01
RABGGTA-213ENST00000560127 NMES1Q9C002 83 aa8.73□□□□□ -1.01
RABGGTA-213ENST00000560127 SLC25A32Q9H2D1 315 aa8.73□□□□□ -1.01
RABGGTA-213ENST00000560127 A0A096LPF7 62 aa8.72□□□□□ -1.01
RABGGTA-213ENST00000560127 TRAV8-2A0A0B4J237 113 aa8.72□□□□□ -1.01
RABGGTA-213ENST00000560127 BOLA2-SMG1P6H3BVE0 249 aa8.72□□□□□ -1.01
RABGGTA-213ENST00000560127 L7N2F9 121 aa8.72□□□□□ -1.01
RABGGTA-213ENST00000560127 SIVA1O15304 175 aa8.72□□□□□ -1.01
RABGGTA-213ENST00000560127 CAV2P51636 162 aa8.72□□□□□ -1.01
RABGGTA-213ENST00000560127 VAMP2P63027 116 aa8.72□□□□□ -1.01
RABGGTA-213ENST00000560127 PATE2Q6UY27 113 aa8.72□□□□□ -1.01
RABGGTA-213ENST00000560127 ZNF493Q6ZR52 646 aa8.72□□□□□ -1.01
RABGGTA-213ENST00000560127 SYT8Q8NBV8 401 aa8.72□□□□□ -1.01
RABGGTA-213ENST00000560127 OR10P1Q8NGE3 313 aa8.72□□□□□ -1.01
RABGGTA-213ENST00000560127 MGAT4CQ9UBM8 478 aa8.72□□□□□ -1.01
RABGGTA-213ENST00000560127 SLC45A2Q9UMX9 530 aa8.72□□□□□ -1.01
RABGGTA-213ENST00000560127 H3BRN7 92 aa8.71□□□□□ -1.02
RABGGTA-213ENST00000560127 LINC00869P0C866 280 aa8.71□□□□□ -1.02
RABGGTA-213ENST00000560127 GALR1P47211 349 aa8.71□□□□□ -1.02
RABGGTA-213ENST00000560127 SULT1A1P50225 295 aa8.71□□□□□ -1.02
RABGGTA-213ENST00000560127 BCAP31P51572 246 aa8.71□□□□□ -1.02
RABGGTA-213ENST00000560127 PLP1P60201 277 aa8.71□□□□□ -1.02
RABGGTA-213ENST00000560127 LRRC37A5PQ49AS3 106 aa8.71□□□□□ -1.02
RABGGTA-213ENST00000560127 RNF182Q8N6D2 247 aa8.71□□□□□ -1.02
RABGGTA-213ENST00000560127 TMEM263Q8WUH6 116 aaKnown RBP8.71□□□□□ -1.02
RABGGTA-213ENST00000560127 PPP1R1CQ8WVI7 109 aa8.71□□□□□ -1.02
RABGGTA-213ENST00000560127 VSIG2Q96IQ7 327 aa8.71□□□□□ -1.02
RABGGTA-213ENST00000560127 GGACTQ9BVM4 153 aa8.71□□□□□ -1.02
RABGGTA-213ENST00000560127 WDR83OSQ9Y284 106 aa8.71□□□□□ -1.02
RABGGTA-213ENST00000560127 RNF213Q63HN8 5207 aa8.7□□□□□ -1.02
RABGGTA-213ENST00000560127 AGPAT2O15120 278 aa8.7□□□□□ -1.02
RABGGTA-213ENST00000560127 SSNA1O43805 119 aa8.7□□□□□ -1.02
RABGGTA-213ENST00000560127 NHLH2Q02577 135 aa8.7□□□□□ -1.02
RABGGTA-213ENST00000560127 MORN5Q5VZ52 161 aa8.7□□□□□ -1.02
RABGGTA-213ENST00000560127 NFE4Q86UQ8 179 aa8.7□□□□□ -1.02
RABGGTA-213ENST00000560127 BPIFCQ8NFQ6 507 aa8.7□□□□□ -1.02
RABGGTA-213ENST00000560127 TMEM70Q9BUB7 260 aa8.7□□□□□ -1.02
RABGGTA-213ENST00000560127 SLC25A22Q9H936 323 aa8.7□□□□□ -1.02
RABGGTA-213ENST00000560127 NPVFQ9HCQ7 196 aa8.7□□□□□ -1.02
RABGGTA-213ENST00000560127 UBE2L5PA0A1B0GUS4 154 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 GAGE12BA1L429 117 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 ZNF98A6NK75 572 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 MRPS12O15235 138 aaKnown RBP8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 GAGE7O76087 117 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 NXPH4O95158 308 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 MPC2O95563 127 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 FABP1P07148 127 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 GAGE12FP0CL80 117 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 GAGE12GP0CL81 117 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 GAGE12IP0CL82 117 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 ORM2P19652 201 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 TEPPQ6URK8 271 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 OR1B1Q8NGR6 318 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 SHANK2-AS3Q9BTD1 123 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 TMEM147Q9BVK8 224 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 TMPRSS5Q9H3S3 457 aa8.69□□□□□ -1.02
RABGGTA-213ENST00000560127 CFDP00746 253 aaPredicted RBP8.68□□□□□ -1.02
RABGGTA-213ENST00000560127 PVALBP20472 110 aaPredicted RBP8.68□□□□□ -1.02
RABGGTA-213ENST00000560127 RHOBP62745 196 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms