RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 G3V318 75 aa11.25□□□□□ -0.61
RABGGTA-212ENST00000559974 Q96MF0 132 aa11.25□□□□□ -0.61
RABGGTA-212ENST00000559974 SERTM2A0A1B0GWG4 89 aa11.24□□□□□ -0.61
RABGGTA-212ENST00000559974 ZNF785A8K8V0 405 aa11.24□□□□□ -0.61
RABGGTA-212ENST00000559974 GPX1P07203 203 aa11.24□□□□□ -0.61
RABGGTA-212ENST00000559974 DEFA6Q01524 100 aa11.24□□□□□ -0.61
RABGGTA-212ENST00000559974 SIGLECL1Q8N7X8 197 aa11.24□□□□□ -0.61
RABGGTA-212ENST00000559974 C18orf32Q8TCD1 76 aa11.24□□□□□ -0.61
RABGGTA-212ENST00000559974 PGLYRP4Q96LB8 373 aa11.24□□□□□ -0.61
RABGGTA-212ENST00000559974 SSBP4Q9BWG4 385 aaPredicted RBP11.24□□□□□ -0.61
RABGGTA-212ENST00000559974 MOB4Q9Y3A3 225 aa11.24□□□□□ -0.61
RABGGTA-212ENST00000559974 TRAV40A0A0B4J280 105 aa11.23□□□□□ -0.61
RABGGTA-212ENST00000559974 RNF223E7ERA6 249 aa11.23□□□□□ -0.61
RABGGTA-212ENST00000559974 CSN1S1P47710 185 aa11.23□□□□□ -0.61
RABGGTA-212ENST00000559974 TMEM219Q86XT9 240 aa11.23□□□□□ -0.61
RABGGTA-212ENST00000559974 LRRC75A-AS1Q8N1F1 130 aa11.23□□□□□ -0.61
RABGGTA-212ENST00000559974 OR2D3Q8NGH3 330 aa11.23□□□□□ -0.61
RABGGTA-212ENST00000559974 NOL4LQ96MY1 436 aaPredicted RBP11.23□□□□□ -0.61
RABGGTA-212ENST00000559974 A0A1W2PS18 150 aa11.23□□□□□ -0.61
RABGGTA-212ENST00000559974 CLEC3BP05452 202 aa11.23□□□□□ -0.61
RABGGTA-212ENST00000559974 FAM209BQ5JX69 171 aa11.23□□□□□ -0.61
RABGGTA-212ENST00000559974 TOMM20LQ6UXN7 152 aa11.23□□□□□ -0.61
RABGGTA-212ENST00000559974 BRD3OSQ6XYD6 125 aa11.23□□□□□ -0.61
RABGGTA-212ENST00000559974 ZFAND3Q9H8U3 227 aa11.23□□□□□ -0.61
RABGGTA-212ENST00000559974 CREBBPQ92793 2442 aa11.22□□□□□ -0.61
RABGGTA-212ENST00000559974 IGHV3-35A0A0C4DH35 117 aa11.22□□□□□ -0.61
RABGGTA-212ENST00000559974 KLF5Q13887 457 aaPredicted RBP11.22□□□□□ -0.61
RABGGTA-212ENST00000559974 ARL6IP6Q8N6S5 226 aa11.22□□□□□ -0.61
RABGGTA-212ENST00000559974 PIFOQ8TCI5 191 aa11.22□□□□□ -0.61
RABGGTA-212ENST00000559974 EEF1AKMT3Q96AZ1 226 aa11.22□□□□□ -0.61
RABGGTA-212ENST00000559974 CCDC140Q96MF4 163 aa11.22□□□□□ -0.61
RABGGTA-212ENST00000559974 ASCL2Q99929 193 aa11.22□□□□□ -0.61
RABGGTA-212ENST00000559974 ALKBH7Q9BT30 221 aaPredicted RBP11.22□□□□□ -0.61
RABGGTA-212ENST00000559974 MEGF9Q9H1U4 602 aa11.22□□□□□ -0.61
RABGGTA-212ENST00000559974 SMAD5-AS1Q9Y6J3 95 aa11.22□□□□□ -0.61
RABGGTA-212ENST00000559974 TLN2Q9Y4G6 2542 aa11.21□□□□□ -0.61
RABGGTA-212ENST00000559974 A8MWP6 167 aa11.21□□□□□ -0.61
RABGGTA-212ENST00000559974 PRB4P10163 310 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-212ENST00000559974 CD33P20138 364 aa11.21□□□□□ -0.61
RABGGTA-212ENST00000559974 AMTP48728 403 aa11.21□□□□□ -0.61
RABGGTA-212ENST00000559974 FOXA3P55318 350 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-212ENST00000559974 IGHV3OR16-8A0A075B7F1 116 aa11.21□□□□□ -0.62
RABGGTA-212ENST00000559974 TRBV7-1A0A0A6YYK4 115 aa11.21□□□□□ -0.62
RABGGTA-212ENST00000559974 ZNF705FA8MVS1 300 aaPredicted RBP11.21□□□□□ -0.62
RABGGTA-212ENST00000559974 ZNF324O75467 553 aaPredicted RBP11.21□□□□□ -0.62
RABGGTA-212ENST00000559974 ZNF705DP0CH99 300 aaPredicted RBP11.21□□□□□ -0.62
RABGGTA-212ENST00000559974 ZNF705BP0CI00 300 aaPredicted RBP11.21□□□□□ -0.62
RABGGTA-212ENST00000559974 PMCHP20382 165 aa11.21□□□□□ -0.62
RABGGTA-212ENST00000559974 RAB9AP51151 201 aa11.21□□□□□ -0.62
RABGGTA-212ENST00000559974 CLEC19AQ6UXS0 136 aa11.21□□□□□ -0.62
RABGGTA-212ENST00000559974 HIVEP1P15822 2718 aa11.2□□□□□ -0.62
RABGGTA-212ENST00000559974 CT45A10P0DMU9 189 aa11.2□□□□□ -0.62
RABGGTA-212ENST00000559974 CRIP1P50238 77 aa11.2□□□□□ -0.62
RABGGTA-212ENST00000559974 TRAV41A0A0B4J266 112 aa11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 FBLL1A6NHQ2 334 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 HAX1O00165 279 aa11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 CHEK1O14757 476 aa11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 APOHP02749 345 aaPredicted RBP11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 IGHV4-38-2P0DP08 117 aa11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 CRIP2P52943 208 aaPredicted RBP11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 C19orf54Q5BKX5 351 aa11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 REC114Q7Z4M0 266 aa11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 C14orf144Q96I85 54 aa11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 C8orf49Q96NF6 230 aa11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 FOXC2Q99958 501 aa11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 NRN1Q9NPD7 142 aa11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 CSPG4Q6UVK1 2322 aa11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 ANK3Q12955 4377 aaKnown RBP11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 IGKV2-40A0A087WW87 121 aaPredicted RBP11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 BUB3O43684 328 aa11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 IGKV2D-40P01614 121 aaPredicted RBP11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 MSMBP08118 114 aa11.19□□□□□ -0.62
RABGGTA-212ENST00000559974 A0A087X0K7 114 aa11.18□□□□□ -0.62
RABGGTA-212ENST00000559974 ATP5G2Q06055 141 aa11.18□□□□□ -0.62
RABGGTA-212ENST00000559974 C1orf194Q5T5A4 169 aa11.18□□□□□ -0.62
RABGGTA-212ENST00000559974 RNF114Q9Y508 228 aa11.18□□□□□ -0.62
RABGGTA-212ENST00000559974 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.18□□□□□ -0.622e-6■■□□□ 14.3
RABGGTA-212ENST00000559974 CLPSL1A2RUU4 121 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 SMAD7O15105 426 aaKnown RBP11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 IGHG4P01861 327 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 DSCR9P59020 149 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 SAPCD1Q5SSQ6 148 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 TEX43Q6ZNM6 134 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 COX8CQ7Z4L0 72 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 ATP6V0BQ99437 205 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 MXRA5Q9NR99 2828 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 KIR2DL5BA0A0G2JN68 375 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 KIR2DL5BA0A0G2JPC4 375 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 A0A1B0GUT8 65 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 FAM223BA6NKX1 122 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 SLC25A16P16260 332 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 KRTDAPP60985 99 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 RELQ04864 619 aaPredicted RBP11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 PRR31Q5SQ13 230 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 Q6AWC8 147 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 PRSS57Q6UWY2 283 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 NIT1Q86X76 327 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 FAM223AQ8IWN6 122 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 KIR2DL5AQ8N109 375 aa11.17□□□□□ -0.62
RABGGTA-212ENST00000559974 FAM19A2Q8N3H0 131 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms