RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 EBLN2Q6P2I7 272 aa10.66□□□□□ -0.7
SMAD6-204ENST00000559931 LYPD1Q8N2G4 141 aa10.66□□□□□ -0.7
SMAD6-204ENST00000559931 RPUSD4Q96CM3 377 aaKnown RBP10.66□□□□□ -0.7
SMAD6-204ENST00000559931 SRD5A3Q9H8P0 318 aa10.66□□□□□ -0.7
SMAD6-204ENST00000559931 PRELID1Q9Y255 219 aa10.66□□□□□ -0.7
SMAD6-204ENST00000559931 AGRNO00468 2067 aa10.65□□□□□ -0.7
SMAD6-204ENST00000559931 LINC00862A6NCI5 91 aa10.65□□□□□ -0.7
SMAD6-204ENST00000559931 KNCNA6PVL3 124 aa10.65□□□□□ -0.7
SMAD6-204ENST00000559931 PRB4P10163 310 aaPredicted RBP10.65□□□□□ -0.7
SMAD6-204ENST00000559931 CSN1S1P47710 185 aa10.65□□□□□ -0.7
SMAD6-204ENST00000559931 DEFB1P60022 68 aa10.65□□□□□ -0.7
SMAD6-204ENST00000559931 STHQ8IWL8 128 aa10.65□□□□□ -0.7
SMAD6-204ENST00000559931 CMTM2Q8TAZ6 248 aa10.65□□□□□ -0.7
SMAD6-204ENST00000559931 OTORQ9NRC9 128 aa10.65□□□□□ -0.7
SMAD6-204ENST00000559931 C19orf73Q9NVV2 129 aa10.65□□□□□ -0.7
SMAD6-204ENST00000559931 TRAV1-1A0A0B4J248 108 aa10.64□□□□□ -0.71
SMAD6-204ENST00000559931 K7EIL1 84 aa10.64□□□□□ -0.71
SMAD6-204ENST00000559931 PPT1P50897 306 aa10.64□□□□□ -0.71
SMAD6-204ENST00000559931 SUMO1P63165 101 aaKnown RBP10.64□□□□□ -0.71
SMAD6-204ENST00000559931 CST9LP1Q5W188 147 aa10.64□□□□□ -0.71
SMAD6-204ENST00000559931 SUN5Q8TC36 379 aa10.64□□□□□ -0.71
SMAD6-204ENST00000559931 RPH3ALQ9UNE2 315 aa10.64□□□□□ -0.71
SMAD6-204ENST00000559931 F6UB75 175 aa10.63□□□□□ -0.71
SMAD6-204ENST00000559931 M0R3E3 92 aa10.63□□□□□ -0.71
SMAD6-204ENST00000559931 SLC25A5P05141 298 aaKnown RBP10.63□□□□□ -0.71
SMAD6-204ENST00000559931 ZNF705DP0CH99 300 aaPredicted RBP10.63□□□□□ -0.71
SMAD6-204ENST00000559931 ZNF705BP0CI00 300 aaPredicted RBP10.63□□□□□ -0.71
SMAD6-204ENST00000559931 IGHV4-30-4P0DP06 118 aa10.63□□□□□ -0.71
SMAD6-204ENST00000559931 RPL35AP18077 110 aaKnown RBP10.63□□□□□ -0.71
SMAD6-204ENST00000559931 CCL20P78556 96 aa10.63□□□□□ -0.71
SMAD6-204ENST00000559931 FOXI2Q6ZQN5 318 aa10.63□□□□□ -0.71
SMAD6-204ENST00000559931 OR4B1Q8NGF8 309 aa10.63□□□□□ -0.71
SMAD6-204ENST00000559931 OR10J6PQ8NGY7 276 aa10.63□□□□□ -0.71
SMAD6-204ENST00000559931 MRAPQ8TCY5 172 aa10.63□□□□□ -0.71
SMAD6-204ENST00000559931 RXFP4Q8TDU9 374 aa10.63□□□□□ -0.71
SMAD6-204ENST00000559931 PCNPQ8WW12 178 aaKnown RBP10.63□□□□□ -0.71
SMAD6-204ENST00000559931 SAV1Q9H4B6 383 aaPredicted RBP10.63□□□□□ -0.71
SMAD6-204ENST00000559931 PPP1R14DQ9NXH3 145 aa10.63□□□□□ -0.71
SMAD6-204ENST00000559931 GNG13Q9P2W3 67 aa10.63□□□□□ -0.71
SMAD6-204ENST00000559931 A0A1W2PRE2 83 aa10.62□□□□□ -0.71
SMAD6-204ENST00000559931 PAGE4O60829 102 aa10.62□□□□□ -0.71
SMAD6-204ENST00000559931 IGKV3-20P01619 116 aa10.62□□□□□ -0.71
SMAD6-204ENST00000559931 HIST1H1AQ02539 215 aaPredicted RBP10.62□□□□□ -0.71
SMAD6-204ENST00000559931 MRPL53Q96EL3 112 aaKnown RBP10.62□□□□□ -0.71
SMAD6-204ENST00000559931 CITED4Q96RK1 184 aa10.62□□□□□ -0.71
SMAD6-204ENST00000559931 NKX6-2Q9C056 277 aaPredicted RBP10.62□□□□□ -0.71
SMAD6-204ENST00000559931 YTHDF2Q9Y5A9 579 aaKnown RBP10.62□□□□□ -0.71
SMAD6-204ENST00000559931 A0A0J9YX75 114 aa10.61□□□□□ -0.71
SMAD6-204ENST00000559931 FAM74A7A6NL05 159 aa10.61□□□□□ -0.71
SMAD6-204ENST00000559931 PRAC2D3DTV9 90 aa10.61□□□□□ -0.71
SMAD6-204ENST00000559931 DUSP14O95147 198 aaKnown RBP10.61□□□□□ -0.71
SMAD6-204ENST00000559931 IFNA1P01562 189 aa10.61□□□□□ -0.71
SMAD6-204ENST00000559931 GDF5OSQ5U4N7 250 aa10.61□□□□□ -0.71
SMAD6-204ENST00000559931 OR8A1Q8NGG7 326 aa10.61□□□□□ -0.71
SMAD6-204ENST00000559931 PRKDCP78527 4128 aaKnown RBP10.61□□□□□ -0.71
SMAD6-204ENST00000559931 LOC102724200A0A096LPH7 203 aaPredicted RBP10.6□□□□□ -0.71
SMAD6-204ENST00000559931 H3BMM0 161 aa10.6□□□□□ -0.71
SMAD6-204ENST00000559931 HLA-DRB4P13762 266 aa10.6□□□□□ -0.71
SMAD6-204ENST00000559931 HAGHQ16775 308 aa10.6□□□□□ -0.71
SMAD6-204ENST00000559931 C5orf17Q8NAS9 161 aa10.6□□□□□ -0.71
SMAD6-204ENST00000559931 MANBALQ9NQG1 85 aa10.6□□□□□ -0.71
SMAD6-204ENST00000559931 HLA-DRB4X5D2U9 266 aa10.6□□□□□ -0.71
SMAD6-204ENST00000559931 IGKV2-40A0A087WW87 121 aaPredicted RBP10.59□□□□□ -0.71
SMAD6-204ENST00000559931 RBMY1BA6NDE4 496 aaKnown RBP10.59□□□□□ -0.71
SMAD6-204ENST00000559931 RBMY1EA6NEQ0 496 aaKnown RBP10.59□□□□□ -0.71
SMAD6-204ENST00000559931 GGTLC3B5MD39 225 aa10.59□□□□□ -0.71
SMAD6-204ENST00000559931 DIRC3C9JPN6 131 aa10.59□□□□□ -0.71
SMAD6-204ENST00000559931 IGKV2D-40P01614 121 aaPredicted RBP10.59□□□□□ -0.71
SMAD6-204ENST00000559931 RBMY1DP0C7P1 496 aaKnown RBP10.59□□□□□ -0.71
SMAD6-204ENST00000559931 FRMD6-AS1P0C7T7 363 aa10.59□□□□□ -0.71
SMAD6-204ENST00000559931 CNN1P51911 297 aaKnown RBP10.59□□□□□ -0.71
SMAD6-204ENST00000559931 GNG5P63218 68 aa10.59□□□□□ -0.71
SMAD6-204ENST00000559931 COMMD7Q86VX2 200 aa10.59□□□□□ -0.71
SMAD6-204ENST00000559931 EPDR1Q9UM22 224 aa10.59□□□□□ -0.71
SMAD6-204ENST00000559931 C11orf94C9JXX5 98 aa10.58□□□□□ -0.72
SMAD6-204ENST00000559931 F6UZH7 168 aa10.58□□□□□ -0.72
SMAD6-204ENST00000559931 K7EQM0 130 aa10.58□□□□□ -0.72
SMAD6-204ENST00000559931 ATP5G3P48201 142 aa10.58□□□□□ -0.72
SMAD6-204ENST00000559931 NUTF2P61970 127 aaKnown RBP10.58□□□□□ -0.72
SMAD6-204ENST00000559931 ERCC8Q13216 396 aa10.58□□□□□ -0.72
SMAD6-204ENST00000559931 GOLT1AQ6ZVE7 132 aa10.58□□□□□ -0.72
SMAD6-204ENST00000559931 TRPT1Q86TN4 253 aaKnown RBP10.58□□□□□ -0.72
SMAD6-204ENST00000559931 MED9Q9NWA0 146 aa10.58□□□□□ -0.72
SMAD6-204ENST00000559931 ARL2-SNX15V9GYD0 113 aa10.58□□□□□ -0.72
SMAD6-204ENST00000559931 A8MZ25 164 aa10.57□□□□□ -0.72
SMAD6-204ENST00000559931 APOC4P55056 127 aa10.57□□□□□ -0.72
SMAD6-204ENST00000559931 FXYD7P58549 80 aa10.57□□□□□ -0.72
SMAD6-204ENST00000559931 TMEM78Q5T7P6 136 aa10.57□□□□□ -0.72
SMAD6-204ENST00000559931 ARL6IP6Q8N6S5 226 aa10.57□□□□□ -0.72
SMAD6-204ENST00000559931 LYPD6BQ8NI32 183 aa10.57□□□□□ -0.72
SMAD6-204ENST00000559931 VGLL1Q99990 258 aa10.57□□□□□ -0.72
SMAD6-204ENST00000559931 CSTL1Q9H114 145 aa10.57□□□□□ -0.72
SMAD6-204ENST00000559931 TCRAP04437 139 aa10.56□□□□□ -0.72
SMAD6-204ENST00000559931 NMBP08949 121 aa10.56□□□□□ -0.72
SMAD6-204ENST00000559931 TAGLN2P37802 199 aaKnown RBP10.56□□□□□ -0.72
SMAD6-204ENST00000559931 LINC00477Q96M19 166 aa10.56□□□□□ -0.72
SMAD6-204ENST00000559931 EIF5A2Q9GZV4 153 aaKnown RBP10.56□□□□□ -0.72
SMAD6-204ENST00000559931 AGPAT4-IT1Q9H0P7 198 aa10.56□□□□□ -0.72
SMAD6-204ENST00000559931 VAX2Q9UIW0 290 aa10.56□□□□□ -0.72
SMAD6-204ENST00000559931 SERTM2A0A1B0GWG4 89 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms