RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 M0R3E3 92 aa10.64□□□□□ -0.71
RABGGTA-211ENST00000559850 LY6G6CO95867 125 aa10.64□□□□□ -0.71
RABGGTA-211ENST00000559850 INSP01308 110 aa10.64□□□□□ -0.71
RABGGTA-211ENST00000559850 IFNA5P01569 189 aa10.64□□□□□ -0.71
RABGGTA-211ENST00000559850 OR10J4P0C629 311 aa10.64□□□□□ -0.71
RABGGTA-211ENST00000559850 KIR3DS1Q14943 382 aa10.64□□□□□ -0.71
RABGGTA-211ENST00000559850 GUK1Q16774 197 aa10.64□□□□□ -0.71
RABGGTA-211ENST00000559850 C12orf74Q32Q52 190 aa10.64□□□□□ -0.71
RABGGTA-211ENST00000559850 EXOC3-AS1Q8N2X6 119 aa10.64□□□□□ -0.71
RABGGTA-211ENST00000559850 LINC00476Q8WZB0 136 aa10.64□□□□□ -0.71
RABGGTA-211ENST00000559850 DNAH1Q9P2D7 4330 aa10.64□□□□□ -0.71
RABGGTA-211ENST00000559850 LOC102723971A0A1B0GUV8 181 aa10.63□□□□□ -0.71
RABGGTA-211ENST00000559850 SMIM9A6NGZ8 99 aa10.63□□□□□ -0.71
RABGGTA-211ENST00000559850 J3KRW8 73 aa10.63□□□□□ -0.71
RABGGTA-211ENST00000559850 HBE1P02100 147 aa10.63□□□□□ -0.71
RABGGTA-211ENST00000559850 HIST1H1EP10412 219 aaKnown RBP10.63□□□□□ -0.71
RABGGTA-211ENST00000559850 RPP25LQ8N5L8 163 aaKnown RBP10.63□□□□□ -0.71
RABGGTA-211ENST00000559850 KCNIP2Q9NS61 270 aa10.63□□□□□ -0.71
RABGGTA-211ENST00000559850 FUT9Q9Y231 359 aa10.63□□□□□ -0.71
RABGGTA-211ENST00000559850 TIMM9Q9Y5J7 89 aa10.63□□□□□ -0.71
RABGGTA-211ENST00000559850 IGLL5B9A064 214 aa10.62□□□□□ -0.71
RABGGTA-211ENST00000559850 AMBPP02760 352 aa10.62□□□□□ -0.71
RABGGTA-211ENST00000559850 ERCC8Q13216 396 aa10.62□□□□□ -0.71
RABGGTA-211ENST00000559850 RRN3P1Q2M238 152 aa10.62□□□□□ -0.71
RABGGTA-211ENST00000559850 FAM222AQ5U5X8 452 aa10.62□□□□□ -0.71
RABGGTA-211ENST00000559850 OR10J6PQ8NGY7 276 aa10.62□□□□□ -0.71
RABGGTA-211ENST00000559850 C2CD4CQ8TF44 421 aa10.62□□□□□ -0.71
RABGGTA-211ENST00000559850 MRPL32Q9BYC8 188 aaKnown RBP10.62□□□□□ -0.71
RABGGTA-211ENST00000559850 OR51M1Q9H341 326 aa10.62□□□□□ -0.71
RABGGTA-211ENST00000559850 YTHDF2Q9Y5A9 579 aaKnown RBP10.62□□□□□ -0.71
RABGGTA-211ENST00000559850 GIPP09681 153 aaPredicted RBP10.61□□□□□ -0.71
RABGGTA-211ENST00000559850 CT45A10P0DMU9 189 aa10.61□□□□□ -0.71
RABGGTA-211ENST00000559850 AZU1P20160 251 aa10.61□□□□□ -0.71
RABGGTA-211ENST00000559850 ICAM4Q14773 271 aa10.61□□□□□ -0.71
RABGGTA-211ENST00000559850 OXA1LQ15070 435 aa10.61□□□□□ -0.71
RABGGTA-211ENST00000559850 FXYD5Q96DB9 178 aa10.61□□□□□ -0.71
RABGGTA-211ENST00000559850 ZNF503Q96F45 646 aa10.61□□□□□ -0.71
RABGGTA-211ENST00000559850 PAXXQ9BUH6 204 aa10.61□□□□□ -0.71
RABGGTA-211ENST00000559850 TRAV10A0A0B4J240 114 aa10.6□□□□□ -0.71
RABGGTA-211ENST00000559850 OR7C2O60412 319 aa10.6□□□□□ -0.71
RABGGTA-211ENST00000559850 ZNF253O75346 499 aa10.6□□□□□ -0.71
RABGGTA-211ENST00000559850 NBEAP1P0C6P0 100 aa10.6□□□□□ -0.71
RABGGTA-211ENST00000559850 SPART-AS1P0CW21 52 aa10.6□□□□□ -0.71
RABGGTA-211ENST00000559850 HTN1P15515 57 aa10.6□□□□□ -0.71
RABGGTA-211ENST00000559850 CDKN1BP46527 198 aa10.6□□□□□ -0.71
RABGGTA-211ENST00000559850 RAB2AP61019 212 aa10.6□□□□□ -0.71
RABGGTA-211ENST00000559850 FAM122CQ6P4D5 195 aa10.6□□□□□ -0.71
RABGGTA-211ENST00000559850 HSD17B11Q8NBQ5 300 aa10.6□□□□□ -0.71
RABGGTA-211ENST00000559850 RNF141Q8WVD5 230 aa10.6□□□□□ -0.71
RABGGTA-211ENST00000559850 PHYHIPLQ96FC7 376 aa10.6□□□□□ -0.71
RABGGTA-211ENST00000559850 LINC01587Q99440 93 aa10.6□□□□□ -0.71
RABGGTA-211ENST00000559850 DKK2Q9UBU2 259 aa10.6□□□□□ -0.71
RABGGTA-211ENST00000559850 IGKV2-40A0A087WW87 121 aaPredicted RBP10.59□□□□□ -0.71
RABGGTA-211ENST00000559850 FXYD6-FXYD2A0A087WZ82 144 aa10.59□□□□□ -0.71
RABGGTA-211ENST00000559850 DEFB131BA0A096LNP1 70 aa10.59□□□□□ -0.71
RABGGTA-211ENST00000559850 TMEM189A5PLL7 270 aa10.59□□□□□ -0.71
RABGGTA-211ENST00000559850 C11orf94C9JXX5 98 aa10.59□□□□□ -0.71
RABGGTA-211ENST00000559850 NPIPB6E9PJ23 425 aa10.59□□□□□ -0.71
RABGGTA-211ENST00000559850 HMGB3O15347 200 aaKnown RBP10.59□□□□□ -0.71
RABGGTA-211ENST00000559850 IGKV2D-40P01614 121 aaPredicted RBP10.59□□□□□ -0.71
RABGGTA-211ENST00000559850 GFI1BQ5VTD9 330 aa10.59□□□□□ -0.71
RABGGTA-211ENST00000559850 AQP10Q96PS8 301 aa10.59□□□□□ -0.71
RABGGTA-211ENST00000559850 SMLR1H3BR10 107 aa10.58□□□□□ -0.72
RABGGTA-211ENST00000559850 UBE2L3P68036 154 aaKnown RBP10.58□□□□□ -0.72
RABGGTA-211ENST00000559850 OR2T35Q8NGX2 323 aa10.58□□□□□ -0.72
RABGGTA-211ENST00000559850 AAMDCQ9H7C9 122 aa10.58□□□□□ -0.72
RABGGTA-211ENST00000559850 APLNQ9ULZ1 77 aa10.58□□□□□ -0.72
RABGGTA-211ENST00000559850 IGHV4-4A0A075B6R2 117 aa10.57□□□□□ -0.72
RABGGTA-211ENST00000559850 G3V3Q6 166 aa10.57□□□□□ -0.72
RABGGTA-211ENST00000559850 HTN3P15516 51 aa10.57□□□□□ -0.72
RABGGTA-211ENST00000559850 PDE6HQ13956 83 aa10.57□□□□□ -0.72
RABGGTA-211ENST00000559850 MRPL53Q96EL3 112 aaKnown RBP10.57□□□□□ -0.72
RABGGTA-211ENST00000559850 NIPSNAP3BQ9BS92 247 aa10.57□□□□□ -0.72
RABGGTA-211ENST00000559850 AGPAT4-IT1Q9H0P7 198 aa10.57□□□□□ -0.72
RABGGTA-211ENST00000559850 SH3BGRL3Q9H299 93 aa10.57□□□□□ -0.72
RABGGTA-211ENST00000559850 PRELID1Q9Y255 219 aa10.57□□□□□ -0.72
RABGGTA-211ENST00000559850 TRAV12-3A0A0B4J271 114 aa10.56□□□□□ -0.72
RABGGTA-211ENST00000559850 PLAC8L1A1L4L8 177 aa10.56□□□□□ -0.72
RABGGTA-211ENST00000559850 RNF222A6NCQ9 220 aa10.56□□□□□ -0.72
RABGGTA-211ENST00000559850 ATP6V0CP27449 155 aa10.56□□□□□ -0.72
RABGGTA-211ENST00000559850 TSPOP30536 169 aa10.56□□□□□ -0.72
RABGGTA-211ENST00000559850 RANP62826 216 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-211ENST00000559850 ACOT6Q3I5F7 207 aaPredicted RBP10.56□□□□□ -0.72
RABGGTA-211ENST00000559850 KHDC3LQ587J8 217 aa10.56□□□□□ -0.72
RABGGTA-211ENST00000559850 OR10G4Q8NGN3 311 aa10.56□□□□□ -0.72
RABGGTA-211ENST00000559850 OR10G9Q8NGN4 311 aa10.56□□□□□ -0.72
RABGGTA-211ENST00000559850 OR10G7Q8NGN6 311 aa10.56□□□□□ -0.72
RABGGTA-211ENST00000559850 VGLL1Q99990 258 aa10.56□□□□□ -0.72
RABGGTA-211ENST00000559850 TNFSF18Q9UNG2 199 aa10.56□□□□□ -0.72
RABGGTA-211ENST00000559850 M6PRP20645 277 aa10.55□□□□□ -0.72
RABGGTA-211ENST00000559850 LEPP41159 167 aa10.55□□□□□ -0.72
RABGGTA-211ENST00000559850 BTN1A1Q13410 526 aa10.55□□□□□ -0.72
RABGGTA-211ENST00000559850 RPL7L1Q6DKI1 246 aaKnown RBP10.55□□□□□ -0.72
RABGGTA-211ENST00000559850 INO80EQ8NBZ0 244 aaPredicted RBP10.55□□□□□ -0.72
RABGGTA-211ENST00000559850 ASB13Q8WXK3 278 aa10.55□□□□□ -0.72
RABGGTA-211ENST00000559850 Q9H3A6 140 aa10.55□□□□□ -0.72
RABGGTA-211ENST00000559850 A0A1W2PPV4 95 aa10.54□□□□□ -0.72
RABGGTA-211ENST00000559850 DEFB130BP0DP73 79 aa10.54□□□□□ -0.72
RABGGTA-211ENST00000559850 DEFB130AP0DP74 79 aa10.54□□□□□ -0.72
RABGGTA-211ENST00000559850 TAS2R45P59539 299 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms