RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 CST7O76096 145 aa13.03□□□□□ -0.32
CDC42BPB-206ENST00000559790 SOHLH1Q5JUK2 328 aa13.03□□□□□ -0.32
CDC42BPB-206ENST00000559790 C10orf113Q5VZT2 155 aa13.03□□□□□ -0.32
CDC42BPB-206ENST00000559790 NRARPQ7Z6K4 114 aa13.03□□□□□ -0.32
CDC42BPB-206ENST00000559790 C6orf223Q8N319 242 aa13.03□□□□□ -0.32
CDC42BPB-206ENST00000559790 ATG101Q9BSB4 218 aa13.03□□□□□ -0.32
CDC42BPB-206ENST00000559790 IGSF23A1L1A6 192 aa13.02□□□□□ -0.33
CDC42BPB-206ENST00000559790 FAM24AA6NFZ4 105 aa13.02□□□□□ -0.33
CDC42BPB-206ENST00000559790 LYRM1O43325 122 aa13.02□□□□□ -0.33
CDC42BPB-206ENST00000559790 CAMLGP49069 296 aa13.02□□□□□ -0.33
CDC42BPB-206ENST00000559790 LRRC20Q8TCA0 184 aa13.02□□□□□ -0.33
CDC42BPB-206ENST00000559790 ODF3Q96PU9 254 aa13.02□□□□□ -0.33
CDC42BPB-206ENST00000559790 LSM5Q9Y4Y9 91 aaKnown RBP13.02□□□□□ -0.33
CDC42BPB-206ENST00000559790 NDUFB4O95168 129 aa13.01□□□□□ -0.33
CDC42BPB-206ENST00000559790 TCRBP04435 133 aa13.01□□□□□ -0.33
CDC42BPB-206ENST00000559790 SSX7Q7RTT5 188 aa13.01□□□□□ -0.33
CDC42BPB-206ENST00000559790 FAM19A4Q96LR4 140 aa13.01□□□□□ -0.33
CDC42BPB-206ENST00000559790 NUDT15Q9NV35 164 aa13.01□□□□□ -0.33
CDC42BPB-206ENST00000559790 PXMP4Q9Y6I8 212 aa13.01□□□□□ -0.33
CDC42BPB-206ENST00000559790 TRAV6A0A075B6T7 132 aa13□□□□□ -0.33
CDC42BPB-206ENST00000559790 TRAV26-1A0A087WT03 109 aa13□□□□□ -0.33
CDC42BPB-206ENST00000559790 CENPXA8MT69 81 aa13□□□□□ -0.33
CDC42BPB-206ENST00000559790 M0R3E3 92 aa13□□□□□ -0.33
CDC42BPB-206ENST00000559790 S100A7AQ86SG5 101 aa13□□□□□ -0.33
CDC42BPB-206ENST00000559790 C11orf72Q8NBR9 251 aa13□□□□□ -0.33
CDC42BPB-206ENST00000559790 ZNF431Q8TF32 576 aaPredicted RBP13□□□□□ -0.33
CDC42BPB-206ENST00000559790 DNAJC4Q9NNZ3 241 aa13□□□□□ -0.33
CDC42BPB-206ENST00000559790 PPP1R14DQ9NXH3 145 aa13□□□□□ -0.33
CDC42BPB-206ENST00000559790 UBE2L5PA0A1B0GUS4 154 aa12.99□□□□□ -0.33
CDC42BPB-206ENST00000559790 RXFP4Q8TDU9 374 aa12.99□□□□□ -0.33
CDC42BPB-206ENST00000559790 TMPRSS5Q9H3S3 457 aa12.99□□□□□ -0.33
CDC42BPB-206ENST00000559790 LYRM2Q9NU23 88 aaPredicted RBP12.99□□□□□ -0.33
CDC42BPB-206ENST00000559790 RNF24Q9Y225 148 aa12.99□□□□□ -0.33
CDC42BPB-206ENST00000559790 TRAV12-3A0A0B4J271 114 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 GAGE12BA1L429 117 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 J3KRW8 73 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 ZNF253O75346 499 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 GAGE7O76087 117 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 GAGE12FP0CL80 117 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 GAGE12GP0CL81 117 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 GAGE12IP0CL82 117 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 RPL29P47914 159 aaKnown RBP12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 CAV2P51636 162 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 CCL18P55774 89 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 CNPY1Q3B7I2 92 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 GCSAMLQ5JQS6 135 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 Q6ZTI0 123 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 OR10J6PQ8NGY7 276 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 CHAC2Q8WUX2 184 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 ZNF503Q96F45 646 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 UPK3BQ9BT76 320 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 SLC39A9Q9NUM3 307 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 UQCC1Q9NVA1 299 aa12.98□□□□□ -0.33
CDC42BPB-206ENST00000559790 TRBV19A0A075B6N1 114 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 A0A0J9YY99 117 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 KLLNB2CW77 178 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 L7N2F9 121 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 CDK2AP2O75956 126 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 M6PRP20645 277 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 VAMP2P63027 116 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 ERCC8Q13216 396 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 RAB32Q13637 225 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 ESRGQ1W209 222 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 PRR9Q5T870 116 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 TMEM252Q8N6L7 170 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 VSIG2Q96IQ7 327 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 C2orf50Q96LR7 162 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 Q9H3A6 140 aa12.97□□□□□ -0.33
CDC42BPB-206ENST00000559790 FAM25EA8MYX2 175 aa12.96□□□□□ -0.33
CDC42BPB-206ENST00000559790 C16orf90A8MZG2 172 aa12.96□□□□□ -0.33
CDC42BPB-206ENST00000559790 ZNF324O75467 553 aaPredicted RBP12.96□□□□□ -0.33
CDC42BPB-206ENST00000559790 PYYP10082 97 aa12.96□□□□□ -0.33
CDC42BPB-206ENST00000559790 SULT1A1P50225 295 aa12.96□□□□□ -0.33
CDC42BPB-206ENST00000559790 DAZ2Q13117 558 aaKnown RBP12.96□□□□□ -0.33
CDC42BPB-206ENST00000559790 GUK1Q16774 197 aa12.96□□□□□ -0.33
CDC42BPB-206ENST00000559790 Q6ZQT7 251 aa12.96□□□□□ -0.33
CDC42BPB-206ENST00000559790 GNPNAT1Q96EK6 184 aaPredicted RBP12.96□□□□□ -0.33
CDC42BPB-206ENST00000559790 MRPL53Q96EL3 112 aaKnown RBP12.96□□□□□ -0.33
CDC42BPB-206ENST00000559790 TMEM14CQ9P0S9 112 aa12.96□□□□□ -0.33
CDC42BPB-206ENST00000559790 H3BNG1 76 aa12.95□□□□□ -0.34
CDC42BPB-206ENST00000559790 BCAP31P51572 246 aa12.95□□□□□ -0.34
CDC42BPB-206ENST00000559790 CD300CQ08708 224 aa12.95□□□□□ -0.34
CDC42BPB-206ENST00000559790 BTN1A1Q13410 526 aa12.95□□□□□ -0.34
CDC42BPB-206ENST00000559790 OR5I1Q13606 314 aa12.95□□□□□ -0.34
CDC42BPB-206ENST00000559790 ZNF846Q147U1 533 aa12.95□□□□□ -0.34
CDC42BPB-206ENST00000559790 C12orf45Q8N5I9 185 aaPredicted RBP12.95□□□□□ -0.34
CDC42BPB-206ENST00000559790 FAM167A-AS1Q96KT0 104 aa12.95□□□□□ -0.34
CDC42BPB-206ENST00000559790 PYGO2Q9BRQ0 406 aa12.95□□□□□ -0.34
CDC42BPB-206ENST00000559790 Q9H8V8 135 aa12.95□□□□□ -0.34
CDC42BPB-206ENST00000559790 C5orf51A6NDU8 294 aa12.94□□□□□ -0.34
CDC42BPB-206ENST00000559790 LEPP41159 167 aa12.94□□□□□ -0.34
CDC42BPB-206ENST00000559790 KRTAP10-2P60368 255 aa12.94□□□□□ -0.34
CDC42BPB-206ENST00000559790 ZFAND2AQ8N6M9 145 aa12.94□□□□□ -0.34
CDC42BPB-206ENST00000559790 OR1L4Q8NGR5 311 aa12.94□□□□□ -0.34
CDC42BPB-206ENST00000559790 C18orf15Q96N68 181 aa12.94□□□□□ -0.34
CDC42BPB-206ENST00000559790 PFDN5Q99471 154 aa12.94□□□□□ -0.34
CDC42BPB-206ENST00000559790 LINC00467Q9BRT7 94 aa12.94□□□□□ -0.34
CDC42BPB-206ENST00000559790 SLC25A2Q9BXI2 301 aa12.94□□□□□ -0.34
CDC42BPB-206ENST00000559790 AGPAT4-IT1Q9H0P7 198 aa12.94□□□□□ -0.34
CDC42BPB-206ENST00000559790 MRPS16Q9Y3D3 137 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms