RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 ZNF586Q9NXT0 402 aa5.88□□□□□ -1.47
SNX1-207ENST00000559401 HSPB11Q9Y547 144 aa5.88□□□□□ -1.47
SNX1-207ENST00000559401 TIMM9Q9Y5J7 89 aa5.88□□□□□ -1.47
SNX1-207ENST00000559401 PRAC2D3DTV9 90 aa5.87□□□□□ -1.47
SNX1-207ENST00000559401 CRXO43186 299 aaPredicted RBP5.87□□□□□ -1.47
SNX1-207ENST00000559401 TSPOP30536 169 aa5.87□□□□□ -1.47
SNX1-207ENST00000559401 CDKN1BP46527 198 aa5.87□□□□□ -1.47
SNX1-207ENST00000559401 TCTAP57738 103 aa5.87□□□□□ -1.47
SNX1-207ENST00000559401 DAD1P61803 113 aa5.87□□□□□ -1.47
SNX1-207ENST00000559401 LGALS9CQ6DKI2 356 aa5.87□□□□□ -1.47
SNX1-207ENST00000559401 MIR17HGQ75NE6 70 aa5.87□□□□□ -1.47
SNX1-207ENST00000559401 RPP25LQ8N5L8 163 aaKnown RBP5.87□□□□□ -1.47
SNX1-207ENST00000559401 SAT2Q96F10 170 aaPredicted RBP5.87□□□□□ -1.47
SNX1-207ENST00000559401 LINC01587Q99440 93 aa5.87□□□□□ -1.47
SNX1-207ENST00000559401 NIPSNAP3BQ9BS92 247 aa5.87□□□□□ -1.47
SNX1-207ENST00000559401 RNF126Q9BV68 326 aa5.87□□□□□ -1.47
SNX1-207ENST00000559401 PARD6GQ9BYG4 376 aaPredicted RBP5.87□□□□□ -1.47
SNX1-207ENST00000559401 MED28Q9H204 178 aa5.87□□□□□ -1.47
SNX1-207ENST00000559401 AAMDCQ9H7C9 122 aa5.87□□□□□ -1.47
SNX1-207ENST00000559401 DKK2Q9UBU2 259 aa5.87□□□□□ -1.47
SNX1-207ENST00000559401 TRBV19A0A075B6N1 114 aa5.86□□□□□ -1.47
SNX1-207ENST00000559401 M0R3E3 92 aa5.86□□□□□ -1.47
SNX1-207ENST00000559401 OR7C2O60412 319 aa5.86□□□□□ -1.47
SNX1-207ENST00000559401 ZNF253O75346 499 aa5.86□□□□□ -1.47
SNX1-207ENST00000559401 PRM2P04554 102 aa5.86□□□□□ -1.47
SNX1-207ENST00000559401 HIST1H1EP10412 219 aaKnown RBP5.86□□□□□ -1.47
SNX1-207ENST00000559401 FFAR4Q5NUL3 377 aa5.86□□□□□ -1.47
SNX1-207ENST00000559401 TMEM256Q8N2U0 113 aa5.86□□□□□ -1.47
SNX1-207ENST00000559401 EXOC3-AS1Q8N2X6 119 aa5.86□□□□□ -1.47
SNX1-207ENST00000559401 SLC25A2Q9BXI2 301 aa5.86□□□□□ -1.47
SNX1-207ENST00000559401 MRPL32Q9BYC8 188 aaKnown RBP5.86□□□□□ -1.47
SNX1-207ENST00000559401 OR51M1Q9H341 326 aa5.86□□□□□ -1.47
SNX1-207ENST00000559401 PLA2G2EQ9NZK7 142 aa5.86□□□□□ -1.47
SNX1-207ENST00000559401 TMEM14CQ9P0S9 112 aa5.86□□□□□ -1.47
SNX1-207ENST00000559401 APLNQ9ULZ1 77 aa5.86□□□□□ -1.47
SNX1-207ENST00000559401 FUT9Q9Y231 359 aa5.86□□□□□ -1.47
SNX1-207ENST00000559401 OR10J4P0C629 311 aa5.85□□□□□ -1.47
SNX1-207ENST00000559401 DEFB130BP0DP73 79 aa5.85□□□□□ -1.47
SNX1-207ENST00000559401 DEFB130AP0DP74 79 aa5.85□□□□□ -1.47
SNX1-207ENST00000559401 LEPP41159 167 aa5.85□□□□□ -1.47
SNX1-207ENST00000559401 UBE2L3P68036 154 aaKnown RBP5.85□□□□□ -1.47
SNX1-207ENST00000559401 PDE6HQ13956 83 aa5.85□□□□□ -1.47
SNX1-207ENST00000559401 ICAM4Q14773 271 aa5.85□□□□□ -1.47
SNX1-207ENST00000559401 FCN2Q15485 313 aa5.85□□□□□ -1.47
SNX1-207ENST00000559401 FAM122CQ6P4D5 195 aa5.85□□□□□ -1.47
SNX1-207ENST00000559401 LYSTQ99698 3801 aa5.85□□□□□ -1.47
SNX1-207ENST00000559401 NDUFAF3Q9BU61 184 aa5.85□□□□□ -1.47
SNX1-207ENST00000559401 PAXXQ9BUH6 204 aa5.85□□□□□ -1.47
SNX1-207ENST00000559401 PRELID1Q9Y255 219 aa5.85□□□□□ -1.47
SNX1-207ENST00000559401 TRAV12-3A0A0B4J271 114 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 NPIPB6E9PJ23 425 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 H7BYZ3 331 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 NDUFB4O95168 129 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 NBEAP1P0C6P0 100 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 AZU1P20160 251 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 TAS2R45P59539 299 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 TAS2R60P59551 318 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 ERCC8Q13216 396 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 KIR3DS1Q14943 382 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 KHDC3LQ587J8 217 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 GFI1BQ5VTD9 330 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 CCDC28AQ8IWP9 274 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 RNF141Q8WVD5 230 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 MRPL53Q96EL3 112 aaKnown RBP5.84□□□□□ -1.47
SNX1-207ENST00000559401 C16orf74Q96GX8 76 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 FAM167A-AS1Q96KT0 104 aa5.84□□□□□ -1.47
SNX1-207ENST00000559401 ALMS1Q8TCU4 4167 aa5.84□□□□□ -1.48
SNX1-207ENST00000559401 IGKV2-40A0A087WW87 121 aaPredicted RBP5.83□□□□□ -1.48
SNX1-207ENST00000559401 A0A1W2PPV4 95 aa5.83□□□□□ -1.48
SNX1-207ENST00000559401 LYRM9A8MSI8 78 aa5.83□□□□□ -1.48
SNX1-207ENST00000559401 EIF3GO75821 320 aaKnown RBP eCLIP5.83□□□□□ -1.48
SNX1-207ENST00000559401 IGKV2D-40P01614 121 aaPredicted RBP5.83□□□□□ -1.48
SNX1-207ENST00000559401 CT45A10P0DMU9 189 aa5.83□□□□□ -1.48
SNX1-207ENST00000559401 CSN1S1P47710 185 aa5.83□□□□□ -1.48
SNX1-207ENST00000559401 OXA1LQ15070 435 aa5.83□□□□□ -1.48
SNX1-207ENST00000559401 RGS21Q2M5E4 152 aa5.83□□□□□ -1.48
SNX1-207ENST00000559401 ACOT6Q3I5F7 207 aaPredicted RBP5.83□□□□□ -1.48
SNX1-207ENST00000559401 TMEM78Q5T7P6 136 aa5.83□□□□□ -1.48
SNX1-207ENST00000559401 UBE2DNLQ8IWF7 75 aa5.83□□□□□ -1.48
SNX1-207ENST00000559401 HSD17B11Q8NBQ5 300 aa5.83□□□□□ -1.48
SNX1-207ENST00000559401 PHYHIPLQ96FC7 376 aa5.83□□□□□ -1.48
SNX1-207ENST00000559401 C20orf144Q9BQM9 153 aa5.83□□□□□ -1.48
SNX1-207ENST00000559401 WFDC1Q9HC57 220 aa5.83□□□□□ -1.48
SNX1-207ENST00000559401 RPH3ALQ9UNE2 315 aa5.83□□□□□ -1.48
SNX1-207ENST00000559401 PLECQ15149 4684 aaKnown RBP5.82□□□□□ -1.48
SNX1-207ENST00000559401 FXYD6-FXYD2A0A087WZ82 144 aa5.82□□□□□ -1.48
SNX1-207ENST00000559401 SNURFLB1AK76 121 aa5.82□□□□□ -1.48
SNX1-207ENST00000559401 F5H768 121 aa5.82□□□□□ -1.48
SNX1-207ENST00000559401 GPX1P07203 203 aa5.82□□□□□ -1.48
SNX1-207ENST00000559401 P0DMU3 169 aa5.82□□□□□ -1.48
SNX1-207ENST00000559401 FAM231AP0DMU4 169 aa5.82□□□□□ -1.48
SNX1-207ENST00000559401 FAM231CP0DMU5 169 aa5.82□□□□□ -1.48
SNX1-207ENST00000559401 RANP62826 216 aaKnown RBP5.82□□□□□ -1.48
SNX1-207ENST00000559401 ZNF266Q14584 549 aa5.82□□□□□ -1.48
SNX1-207ENST00000559401 TMEM88Q6PEY1 159 aa5.82□□□□□ -1.48
SNX1-207ENST00000559401 ZNF493Q6ZR52 646 aa5.82□□□□□ -1.48
SNX1-207ENST00000559401 TMEM263Q8WUH6 116 aaKnown RBP5.82□□□□□ -1.48
SNX1-207ENST00000559401 FXYD5Q96DB9 178 aa5.82□□□□□ -1.48
SNX1-207ENST00000559401 LINC00477Q96M19 166 aa5.82□□□□□ -1.48
SNX1-207ENST00000559401 ODF3Q96PU9 254 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms