RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 GCHFRP30047 84 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 PSMB3P49720 205 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 MEOX2P50222 304 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 FGF8P55075 233 aaPredicted RBP4.39□□□□□ -1.71
SHC4-206ENST00000559289 TAS2R45P59539 299 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 DEFB131AP59861 70 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 UBE2L3P68036 154 aaKnown RBP4.39□□□□□ -1.71
SHC4-206ENST00000559289 IFITM2Q01629 132 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 PDE6HQ13956 83 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 GUK1Q16774 197 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 GDF5OSQ5U4N7 250 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 TEX261Q6UWH6 196 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 LCN15Q6UWW0 184 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 DPPA3Q6W0C5 159 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 PQLC2Q6ZP29 291 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 APRG1Q8IVJ8 170 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 DEFB125Q8N687 156 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 RNF182Q8N6D2 247 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 FAM213BQ8TBF2 198 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 BLNKQ8WV28 456 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 C16orf92Q96LL3 132 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 RNF24Q9Y225 148 aa4.39□□□□□ -1.71
SHC4-206ENST00000559289 MAP1LC3B2A6NCE7 125 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 RBMY1BA6NDE4 496 aaKnown RBP4.38□□□□□ -1.71
SHC4-206ENST00000559289 RBMY1EA6NEQ0 496 aaKnown RBP4.38□□□□□ -1.71
SHC4-206ENST00000559289 KNCNA6PVL3 124 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 A8MTW9 85 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 ZNF705FA8MVS1 300 aaPredicted RBP4.38□□□□□ -1.71
SHC4-206ENST00000559289 PRAC2D3DTV9 90 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 F6UB75 175 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 M0R3E3 92 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 CXorf1O96002 111 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 RBMY1DP0C7P1 496 aaKnown RBP4.38□□□□□ -1.71
SHC4-206ENST00000559289 IGHV4-30-4P0DP06 118 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 RAB5CP51148 216 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 CCL20P78556 96 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 DEFA6Q01524 100 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 PSG3Q16557 428 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 SMUG1Q53HV7 270 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 PSMG4Q5JS54 123 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 EIF5AL1Q6IS14 154 aaKnown RBP4.38□□□□□ -1.71
SHC4-206ENST00000559289 LINC00322Q6ZN03 302 aaPredicted RBP4.38□□□□□ -1.71
SHC4-206ENST00000559289 GTSCR1Q86UQ5 136 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 EXOC3-AS1Q8N2X6 119 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 ZNF680Q8NEM1 530 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 LYPD6BQ8NI32 183 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 SLC50A1Q9BRV3 221 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 MAP1LC3BQ9GZQ8 125 aa4.38□□□□□ -1.71
SHC4-206ENST00000559289 TRAV1-1A0A0B4J248 108 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 A0A0J9YX75 114 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 A4D1N5 150 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 PGPA6NDG6 321 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 A8MZ25 164 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 GGTLC3B5MD39 225 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 H3BMM0 161 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 H2AFB1P0C5Y9 115 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 ZNF705DP0CH99 300 aaPredicted RBP4.37□□□□□ -1.71
SHC4-206ENST00000559289 ZNF705BP0CI00 300 aaPredicted RBP4.37□□□□□ -1.71
SHC4-206ENST00000559289 SNRPD3P62318 126 aaKnown RBP4.37□□□□□ -1.71
SHC4-206ENST00000559289 RANP62826 216 aaKnown RBP4.37□□□□□ -1.71
SHC4-206ENST00000559289 ICAM4Q14773 271 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 SAMD13Q5VXD3 122 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 LYPD1Q8N2G4 141 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 SFT2D1Q8WV19 159 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 MRPL53Q96EL3 112 aaKnown RBP4.37□□□□□ -1.71
SHC4-206ENST00000559289 LINC00052Q96N35 136 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 Q9H3A6 140 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 SAV1Q9H4B6 383 aaPredicted RBP4.37□□□□□ -1.71
SHC4-206ENST00000559289 SRD5A3Q9H8P0 318 aa4.37□□□□□ -1.71
SHC4-206ENST00000559289 YTHDF2Q9Y5A9 579 aaKnown RBP4.37□□□□□ -1.71
SHC4-206ENST00000559289 A0A1B0GV50 99 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 FAM74A7A6NL05 159 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 ZNF705EA8MWA4 302 aaPredicted RBP4.36□□□□□ -1.71
SHC4-206ENST00000559289 GIG44P09565 113 aaPredicted RBP4.36□□□□□ -1.71
SHC4-206ENST00000559289 FRMD6-AS1P0C7T7 363 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 HLA-DRB4P13762 266 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 ID1P41134 155 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 CMC4P56277 68 aaPredicted RBP4.36□□□□□ -1.71
SHC4-206ENST00000559289 UBE2G2P60604 165 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 GNG5P63218 68 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 PSG9Q00887 426 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 COTL1Q14019 142 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 AMTNQ6UX39 209 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 FOXI2Q6ZQN5 318 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 TRPT1Q86TN4 253 aaKnown RBP4.36□□□□□ -1.71
SHC4-206ENST00000559289 CCDC28AQ8IWP9 274 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 ZNF738Q8NE65 137 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 LRRC20Q8TCA0 184 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 PCNPQ8WW12 178 aaKnown RBP4.36□□□□□ -1.71
SHC4-206ENST00000559289 RPUSD4Q96CM3 377 aaKnown RBP4.36□□□□□ -1.71
SHC4-206ENST00000559289 OTORQ9NRC9 128 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 TMEM167BQ9NRX6 74 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 HLA-DRB4X5D2U9 266 aa4.36□□□□□ -1.71
SHC4-206ENST00000559289 IGKV2-40A0A087WW87 121 aaPredicted RBP4.35□□□□□ -1.71
SHC4-206ENST00000559289 A0A1W2PRE2 83 aa4.35□□□□□ -1.71
SHC4-206ENST00000559289 H0Y8G0 127 aa4.35□□□□□ -1.71
SHC4-206ENST00000559289 PAGE4O60829 102 aa4.35□□□□□ -1.71
SHC4-206ENST00000559289 IGKV2D-40P01614 121 aaPredicted RBP4.35□□□□□ -1.71
SHC4-206ENST00000559289 NMBP08949 121 aa4.35□□□□□ -1.71
SHC4-206ENST00000559289 ATP5G3P48201 142 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms