RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 RTL9Q8NET4 1388 aa0.78□□□□□ -2.28
VPS13C-207ENST00000558919 SCN10AQ9Y5Y9 1956 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 A0A087WSZ3 146 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 A0A087WX48 190 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 CCL16O15467 120 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 DPM2O94777 84 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 CXCL8P10145 99 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 FABP4P15090 132 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 IL9P15248 144 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 CRYGSP22914 178 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 ARPC4P59998 168 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 LSM3P62310 102 aaKnown RBP0.77□□□□□ -2.29
VPS13C-207ENST00000558919 CNBPP62633 177 aaKnown RBP0.77□□□□□ -2.29
VPS13C-207ENST00000558919 PSG9Q00887 426 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 SMCO1Q147U7 214 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 TMEM14EPQ6UXP3 125 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 ZNF833PQ6ZTB9 187 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 ARPINQ7Z6K5 226 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 TEN1Q86WV5 123 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 OR5AS1Q8N127 324 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 BRK1Q8WUW1 75 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 MAFIPQ8WZ33 124 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 DIRC1Q969H9 104 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 OR4C12Q96R67 309 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 TAF9BQ9HBM6 251 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 CDC42SE1Q9NRR8 79 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 CBLN4Q9NTU7 201 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 TAS2R7Q9NYW3 318 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 CALML5Q9NZT1 146 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 GSKIPQ9P0R6 139 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 ORMDL1Q9P0S3 153 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 JPT1Q9UK76 154 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 KDM6AO15550 1401 aaPredicted RBP0.77□□□□□ -2.29
VPS13C-207ENST00000558919 TNS3Q68CZ2 1445 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 A2MP01023 1474 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 MACF1Q9UPN3 7388 aaKnown RBP0.77□□□□□ -2.29
VPS13C-207ENST00000558919 ARHGEF11O15085 1522 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 SBF1O95248 1867 aa0.77□□□□□ -2.29
VPS13C-207ENST00000558919 KIF1BO60333 1816 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 TNRC6BQ9UPQ9 1833 aaKnown RBP0.76□□□□□ -2.29
VPS13C-207ENST00000558919 OVOS2A0A0G2JMS6 1433 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 FHAD1B1AJZ9 1412 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 ARHGEF10O15013 1369 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 IGKV3-7A0A075B6H7 116 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 A0A096LPI6 279 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.76□□□□□ -2.29
VPS13C-207ENST00000558919 TMEM189A5PLL7 270 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 C5orf67F2Z3F1 127 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 F8W1H4 67 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 M0QZK8 103 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 ARPC5O15511 151 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 TRACP01848 142 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 PAEPP09466 180 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 SDC4P31431 198 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 RPL22P35268 128 aaKnown RBP0.76□□□□□ -2.29
VPS13C-207ENST00000558919 MAXP61244 160 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 PSPHP78330 225 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 TCTE3Q8IZS6 198 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 MORN4Q8NDC4 146 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 OR5A2Q8NGI9 324 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 OR51A4Q8NGJ6 313 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 Q8TAT8 98 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 PATE1Q8WXA2 126 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 BORCS5Q969J3 196 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 LINC00052Q96N35 136 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 AP1S3Q96PC3 154 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 NIT2Q9NQR4 276 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 CEP192Q8TEP8 1941 aa0.76□□□□□ -2.29
VPS13C-207ENST00000558919 UNC13AQ9UPW8 1703 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 KIAA1107Q9UPP5 1409 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 TRBV6-7A0A0A0MS04 114 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 LOC107986453A0A1B0GWG9 222 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 TRBV6-4A0A1B0GX49 114 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 C9orf170A2RU37 121 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 C9JAW5 83 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 H3BRM9 83 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 GEMIN2O14893 280 aaKnown RBP0.75□□□□□ -2.29
VPS13C-207ENST00000558919 HCRTO43612 131 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 TNFSF15O95150 251 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 OR2H2O95918 312 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 DNAL4O96015 105 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 SCTP09683 121 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 SAA1P0DJI8 122 aaPredicted RBP0.75□□□□□ -2.29
VPS13C-207ENST00000558919 COX7CP15954 63 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 FOXA3P55318 350 aaPredicted RBP0.75□□□□□ -2.29
VPS13C-207ENST00000558919 DIAPH2-AS1Q14236 149 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 MPV17LQ2QL34 196 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 OR10AG1Q8NH19 301 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 OR5AK2Q8NH90 309 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 CCL4L1Q8NHW4 92 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 NAT14Q8WUY8 206 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 CLEC2BQ92478 149 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 MAGOHBQ96A72 148 aaKnown RBP0.75□□□□□ -2.29
VPS13C-207ENST00000558919 CST11Q9H112 138 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 TMEM138Q9NPI0 162 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 FKBP11Q9NYL4 201 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 HIGD1AQ9Y241 93 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 OBSL1O75147 1896 aa0.75□□□□□ -2.29
VPS13C-207ENST00000558919 DIDO1Q9BTC0 2240 aaKnown RBP0.74□□□□□ -2.29
VPS13C-207ENST00000558919 TNRC6AQ8NDV7 1962 aaKnown RBP0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms