RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 TMEM268Q5VZI3 342 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 TMEM182Q6ZP80 229 aaPredicted RBP4.47□□□□□ -1.69
LRRC28-207ENST00000558500 CCDC190Q86UF4 302 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 SNX29P2Q8IUI4 249 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 CROCCP3Q8IVE0 287 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 C11orf72Q8NBR9 251 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 ZNF680Q8NEM1 530 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 OR13C8Q8NGS7 320 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 TERB2Q8NHR7 220 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 LRRC20Q8TCA0 184 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 ST6GAL2Q96JF0 529 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 C8orf49Q96NF6 230 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 PYGO2Q9BRQ0 406 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 SHANK2-AS3Q9BTD1 123 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 RBKSQ9H477 322 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 NAA60Q9H7X0 242 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 HHLA3Q9XRX5 114 aa4.47□□□□□ -1.69
LRRC28-207ENST00000558500 RCL1Q9Y2P8 373 aaKnown RBP4.47□□□□□ -1.69
LRRC28-207ENST00000558500 TRAV12-3A0A0B4J271 114 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 IBA57-AS1B1ANH7 110 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 PRAC2D3DTV9 90 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 K7EQD1 137 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 SPINK4O60575 86 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 CD3DP04234 171 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 SRIP30626 198 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 GABARAPL2P60520 117 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 FHL2Q14192 279 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 WFDC2Q14508 124 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 STEAP1BQ6NZ63 245 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 OR1S1Q8NH92 325 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 MARCH1Q8TCQ1 289 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 ZNF431Q8TF32 576 aaPredicted RBP4.46□□□□□ -1.7
LRRC28-207ENST00000558500 CNBD2Q96M20 576 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 VGLL1Q99990 258 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 CHAC1Q9BUX1 264 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 Q9HAA7 133 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 KLF12Q9Y4X4 402 aa4.46□□□□□ -1.7
LRRC28-207ENST00000558500 LINC00854A0A1B0GVQ3 168 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 SMIM31A0A1B0GVY4 71 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 E5RGE8 158 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 TNFAIP8O95379 198 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 IGLV2-8P01709 118 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 TBPP20226 339 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 LEPP41159 167 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 CCR6P51684 374 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 HNRNPA3P51991 378 aaKnown RBP4.45□□□□□ -1.7
LRRC28-207ENST00000558500 TCL1AP56279 114 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 RAB11AP62491 216 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 ZNF415Q09FC8 603 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 ASAH1Q13510 395 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 ANXA2RQ3ZCQ2 193 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 LINC01620Q4KN68 170 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 CIRBP-AS1Q8TBR5 109 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 RTBDNQ9BSG5 229 aaPredicted RBP4.45□□□□□ -1.7
LRRC28-207ENST00000558500 MRPL32Q9BYC8 188 aaKnown RBP4.45□□□□□ -1.7
LRRC28-207ENST00000558500 HIGD1AQ9Y241 93 aa4.45□□□□□ -1.7
LRRC28-207ENST00000558500 IGHV3-38A0A0C4DH36 116 aa4.44□□□□□ -1.7
LRRC28-207ENST00000558500 CRYM-AS1A6NIL9 109 aa4.44□□□□□ -1.7
LRRC28-207ENST00000558500 PRSS46E5RG02 174 aa4.44□□□□□ -1.7
LRRC28-207ENST00000558500 MRPS12O15235 138 aaKnown RBP4.44□□□□□ -1.7
LRRC28-207ENST00000558500 CT45A10P0DMU9 189 aa4.44□□□□□ -1.7
LRRC28-207ENST00000558500 CXCL2P19875 107 aa4.44□□□□□ -1.7
LRRC28-207ENST00000558500 TGFBR1P36897 503 aa4.44□□□□□ -1.7
LRRC28-207ENST00000558500 RPL37AP61513 92 aaKnown RBP4.44□□□□□ -1.7
LRRC28-207ENST00000558500 SMCO1Q147U7 214 aa4.44□□□□□ -1.7
LRRC28-207ENST00000558500 ACOT6Q3I5F7 207 aaPredicted RBP4.44□□□□□ -1.7
LRRC28-207ENST00000558500 SCGB2B2Q4G0G5 96 aa4.44□□□□□ -1.7
LRRC28-207ENST00000558500 LINC01556Q5JQF7 62 aa4.44□□□□□ -1.7
LRRC28-207ENST00000558500 LCN15Q6UWW0 184 aa4.44□□□□□ -1.7
LRRC28-207ENST00000558500 ACOT7LQ6ZUV0 252 aa4.44□□□□□ -1.7
LRRC28-207ENST00000558500 EIF4E3Q8N5X7 224 aaKnown RBP4.44□□□□□ -1.7
LRRC28-207ENST00000558500 ZBTB8BQ8NAP8 495 aaPredicted RBP4.44□□□□□ -1.7
LRRC28-207ENST00000558500 OR4D10Q8NGI6 311 aa4.44□□□□□ -1.7
LRRC28-207ENST00000558500 PCNPQ8WW12 178 aaKnown RBP4.44□□□□□ -1.7
LRRC28-207ENST00000558500 DAZAP1Q96EP5 407 aaKnown RBP4.44□□□□□ -1.7
LRRC28-207ENST00000558500 ODF3Q96PU9 254 aa4.44□□□□□ -1.7
LRRC28-207ENST00000558500 DNAJC4Q9NNZ3 241 aa4.44□□□□□ -1.7
LRRC28-207ENST00000558500 ZNF331Q9NQX6 463 aaPredicted RBP4.44□□□□□ -1.7
LRRC28-207ENST00000558500 MRPL16Q9NX20 251 aaKnown RBP4.44□□□□□ -1.7
LRRC28-207ENST00000558500 PAIP2BQ9ULR5 123 aaKnown RBP4.44□□□□□ -1.7
LRRC28-207ENST00000558500 C14orf166Q9Y224 244 aaKnown RBP4.44□□□□□ -1.7
LRRC28-207ENST00000558500 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.43□□□□□ -1.7
LRRC28-207ENST00000558500 A0A0B4J2A0 478 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 PMS2P5A8MQ11 134 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 HYPMO75409 117 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 SCGB1D1O95968 90 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 IGLV2-11P01706 119 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 APOA1P02647 267 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 ORM1P02763 201 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 SLC25A5P05141 298 aaKnown RBP4.43□□□□□ -1.7
LRRC28-207ENST00000558500 IAPPP10997 89 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 AKR1C4P17516 323 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 SURF2Q15527 256 aaPredicted RBP4.43□□□□□ -1.7
LRRC28-207ENST00000558500 TDRG1Q3Y452 100 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 IBA57Q5T440 356 aaKnown RBP4.43□□□□□ -1.7
LRRC28-207ENST00000558500 MORN5Q5VZ52 161 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 LYZL2Q7Z4W2 148 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 BLNKQ8WV28 456 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 SLC50A1Q9BRV3 221 aa4.43□□□□□ -1.7
LRRC28-207ENST00000558500 TM2D2Q9BX73 214 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms