RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 AAMDCQ9H7C9 122 aa8.98□□□□□ -0.97
SMAD3-205ENST00000558428 PPP1R14DQ9NXH3 145 aa8.98□□□□□ -0.97
SMAD3-205ENST00000558428 hCG_2014768A0A024R1R8 64 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 HMSDA8MTL9 139 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 ZNF705EA8MWA4 302 aaPredicted RBP8.97□□□□□ -0.97
SMAD3-205ENST00000558428 PRAC2D3DTV9 90 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 M0R2Z0 102 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 M0R3E3 92 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 MBP02144 154 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 CDC34P49427 236 aaPredicted RBP8.97□□□□□ -0.97
SMAD3-205ENST00000558428 ZNF345Q14585 488 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 SPINK13Q1W4C9 94 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 EXOC3-AS1Q8N2X6 119 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 KCNRGQ8N5I3 272 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 IL17DQ8TAD2 202 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 MRPL53Q96EL3 112 aaKnown RBP8.97□□□□□ -0.97
SMAD3-205ENST00000558428 PHYHIPLQ96FC7 376 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 ST6GAL2Q96JF0 529 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 ARPC5LQ9BPX5 153 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 PRELID1Q9Y255 219 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 X6R8D5 127 aa8.97□□□□□ -0.97
SMAD3-205ENST00000558428 IGHV3OR16-12A0A075B7B8 117 aa8.96□□□□□ -0.98
SMAD3-205ENST00000558428 BOLA2-SMG1P6H3BVE0 249 aa8.96□□□□□ -0.98
SMAD3-205ENST00000558428 DEFB4AO15263 64 aa8.96□□□□□ -0.98
SMAD3-205ENST00000558428 HMGB3O15347 200 aaKnown RBP8.96□□□□□ -0.98
SMAD3-205ENST00000558428 AMBPP02760 352 aa8.96□□□□□ -0.98
SMAD3-205ENST00000558428 MIFP14174 115 aa8.96□□□□□ -0.98
SMAD3-205ENST00000558428 ICAM4Q14773 271 aa8.96□□□□□ -0.98
SMAD3-205ENST00000558428 ZFAND6Q6FIF0 208 aa8.96□□□□□ -0.98
SMAD3-205ENST00000558428 PQLC2Q6ZP29 291 aa8.96□□□□□ -0.98
SMAD3-205ENST00000558428 RPP25LQ8N5L8 163 aaKnown RBP8.96□□□□□ -0.98
SMAD3-205ENST00000558428 Q8NAQ8 132 aa8.96□□□□□ -0.98
SMAD3-205ENST00000558428 C11orf68Q9H3H3 251 aaKnown RBP8.96□□□□□ -0.98
SMAD3-205ENST00000558428 CYTL1Q9NRR1 136 aa8.96□□□□□ -0.98
SMAD3-205ENST00000558428 IGHV4-28A0A0C4DH34 117 aa8.95□□□□□ -0.98
SMAD3-205ENST00000558428 A0A0D9SG52 128 aa8.95□□□□□ -0.98
SMAD3-205ENST00000558428 KANTRA0A1W2PQU2 76 aa8.95□□□□□ -0.98
SMAD3-205ENST00000558428 ZNF705AQ6ZN79 300 aaPredicted RBP8.95□□□□□ -0.98
SMAD3-205ENST00000558428 BAP18Q8IXM2 172 aa8.95□□□□□ -0.98
SMAD3-205ENST00000558428 TCTE3Q8IZS6 198 aa8.95□□□□□ -0.98
SMAD3-205ENST00000558428 RAB24Q969Q5 203 aa8.95□□□□□ -0.98
SMAD3-205ENST00000558428 IGF2BP2-AS1Q96M15 143 aa8.95□□□□□ -0.98
SMAD3-205ENST00000558428 GOLT1BQ9Y3E0 138 aa8.95□□□□□ -0.98
SMAD3-205ENST00000558428 KMT2CQ8NEZ4 4911 aaKnown RBP8.94□□□□□ -0.98
SMAD3-205ENST00000558428 TRAV12-2A0A075B6T6 113 aa8.94□□□□□ -0.98
SMAD3-205ENST00000558428 CRXO43186 299 aaPredicted RBP8.94□□□□□ -0.98
SMAD3-205ENST00000558428 INSP01308 110 aa8.94□□□□□ -0.98
SMAD3-205ENST00000558428 STAG3L2P0CL84 134 aa8.94□□□□□ -0.98
SMAD3-205ENST00000558428 STAG3L3P0CL85 134 aa8.94□□□□□ -0.98
SMAD3-205ENST00000558428 ARL14EPLP0DKL9 152 aa8.94□□□□□ -0.98
SMAD3-205ENST00000558428 RANP62826 216 aaKnown RBP8.94□□□□□ -0.98
SMAD3-205ENST00000558428 AKR1C8PQ5T2L2 129 aa8.94□□□□□ -0.98
SMAD3-205ENST00000558428 CASC10Q5T4H9 136 aa8.94□□□□□ -0.98
SMAD3-205ENST00000558428 LYPD1Q8N2G4 141 aa8.94□□□□□ -0.98
SMAD3-205ENST00000558428 TMEM208Q9BTX3 173 aa8.94□□□□□ -0.98
SMAD3-205ENST00000558428 ACTR3CQ9C0K3 210 aaPredicted RBP8.94□□□□□ -0.98
SMAD3-205ENST00000558428 Q9H3A6 140 aa8.94□□□□□ -0.98
SMAD3-205ENST00000558428 PLECQ15149 4684 aaKnown RBP8.93□□□□□ -0.98
SMAD3-205ENST00000558428 NPIPB6E9PJ23 425 aa8.93□□□□□ -0.98
SMAD3-205ENST00000558428 BCL2L11O43521 198 aa8.93□□□□□ -0.98
SMAD3-205ENST00000558428 RBMY1A1P0DJD3 496 aaKnown RBP8.93□□□□□ -0.98
SMAD3-205ENST00000558428 RBMY1CP0DJD4 496 aa8.93□□□□□ -0.98
SMAD3-205ENST00000558428 CDKN1BP46527 198 aa8.93□□□□□ -0.98
SMAD3-205ENST00000558428 ERCC8Q13216 396 aa8.93□□□□□ -0.98
SMAD3-205ENST00000558428 RBMY1FQ15415 496 aaKnown RBP8.93□□□□□ -0.98
SMAD3-205ENST00000558428 C1orf158Q8N1D5 194 aa8.93□□□□□ -0.98
SMAD3-205ENST00000558428 NEU1Q99519 415 aa8.93□□□□□ -0.98
SMAD3-205ENST00000558428 ZNF471Q9BX82 626 aaPredicted RBP8.93□□□□□ -0.98
SMAD3-205ENST00000558428 IGKV2-40A0A087WW87 121 aaPredicted RBP8.92□□□□□ -0.98
SMAD3-205ENST00000558428 SMIM9A6NGZ8 99 aa8.92□□□□□ -0.98
SMAD3-205ENST00000558428 PFDN1O60925 122 aa8.92□□□□□ -0.98
SMAD3-205ENST00000558428 IGKV2D-40P01614 121 aaPredicted RBP8.92□□□□□ -0.98
SMAD3-205ENST00000558428 CT45A10P0DMU9 189 aa8.92□□□□□ -0.98
SMAD3-205ENST00000558428 TSPOP30536 169 aa8.92□□□□□ -0.98
SMAD3-205ENST00000558428 CSN1S1P47710 185 aa8.92□□□□□ -0.98
SMAD3-205ENST00000558428 PMS2P11Q13670 270 aa8.92□□□□□ -0.98
SMAD3-205ENST00000558428 TMUB2Q71RG4 321 aa8.92□□□□□ -0.98
SMAD3-205ENST00000558428 SSX7Q7RTT5 188 aa8.92□□□□□ -0.98
SMAD3-205ENST00000558428 AKAP14Q86UN6 197 aa8.92□□□□□ -0.98
SMAD3-205ENST00000558428 C11orf45Q8TAV5 145 aa8.92□□□□□ -0.98
SMAD3-205ENST00000558428 CTXND1A0A1B0GTU2 59 aa8.91□□□□□ -0.98
SMAD3-205ENST00000558428 PGPA6NDG6 321 aa8.91□□□□□ -0.98
SMAD3-205ENST00000558428 CXorf65A6NEN9 183 aa8.91□□□□□ -0.98
SMAD3-205ENST00000558428 J3KRW8 73 aa8.91□□□□□ -0.98
SMAD3-205ENST00000558428 CXorf1O96002 111 aa8.91□□□□□ -0.98
SMAD3-205ENST00000558428 HBE1P02100 147 aa8.91□□□□□ -0.98
SMAD3-205ENST00000558428 GCHFRP30047 84 aa8.91□□□□□ -0.98
SMAD3-205ENST00000558428 LEPP41159 167 aa8.91□□□□□ -0.98
SMAD3-205ENST00000558428 FAM74A1Q5RGS3 127 aa8.91□□□□□ -0.98
SMAD3-205ENST00000558428 IQCF2Q8IXL9 164 aa8.91□□□□□ -0.98
SMAD3-205ENST00000558428 HYLS1Q96M11 299 aa8.91□□□□□ -0.98
SMAD3-205ENST00000558428 LINC00477Q96M19 166 aa8.91□□□□□ -0.98
SMAD3-205ENST00000558428 ODF3Q96PU9 254 aa8.91□□□□□ -0.98
SMAD3-205ENST00000558428 OTORQ9NRC9 128 aa8.91□□□□□ -0.98
SMAD3-205ENST00000558428 C1QBP02746 253 aa8.9□□□□□ -0.98
SMAD3-205ENST00000558428 EMP1P54849 157 aa8.9□□□□□ -0.98
SMAD3-205ENST00000558428 NANOS2P60321 138 aaKnown RBP8.9□□□□□ -0.98
SMAD3-205ENST00000558428 EIF5AP63241 154 aaKnown RBP8.9□□□□□ -0.98
SMAD3-205ENST00000558428 KIR3DS1Q14943 382 aa8.9□□□□□ -0.98
SMAD3-205ENST00000558428 ZNF726P1Q15940 193 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms