RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 TTC28Q96AY4 2481 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 RAI1Q7Z5J4 1906 aaPredicted RBP8.83□□□□□ -1
PCAT29-201ENST00000558411 SMKR1H3BMG3 65 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 SH2D1AO60880 128 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 CEACAM4O75871 244 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 XGP55808 180 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 SRSF2Q01130 221 aaKnown RBP8.83□□□□□ -1
PCAT29-201ENST00000558411 PLGLAQ15195 96 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 C8orf31Q8N9H6 132 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 PPDPFLQ8WWR9 84 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 C8orf49Q96NF6 230 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 NCBP2LA6PVI3 153 aaKnown RBP8.82□□□□□ -1
PCAT29-201ENST00000558411 HOXA3O43365 443 aaPredicted RBP8.82□□□□□ -1
PCAT29-201ENST00000558411 IGLC6P0CF74 106 aa8.82□□□□□ -1
PCAT29-201ENST00000558411 PLNP26678 52 aa8.82□□□□□ -1
PCAT29-201ENST00000558411 SMCPP49901 116 aaPredicted RBP8.82□□□□□ -1
PCAT29-201ENST00000558411 MRGPRG-AS1Q2M3A8 158 aa8.82□□□□□ -1
PCAT29-201ENST00000558411 PEAR1Q5VY43 1037 aaPredicted RBP8.82□□□□□ -1
PCAT29-201ENST00000558411 HCP5Q6MZN7 132 aa8.82□□□□□ -1
PCAT29-201ENST00000558411 MORN3Q6PF18 240 aaPredicted RBP8.82□□□□□ -1
PCAT29-201ENST00000558411 RNF185Q96GF1 192 aa8.82□□□□□ -1
PCAT29-201ENST00000558411 CNFNQ9BYD5 112 aa8.82□□□□□ -1
PCAT29-201ENST00000558411 SDK1Q7Z5N4 2213 aa8.82□□□□□ -1
PCAT29-201ENST00000558411 H3BRN7 92 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 MSMPQ1L6U9 139 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 FAM201AQ5SY85 155 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 LYRM7Q5U5X0 104 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 NFE4Q86UQ8 179 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 LINC00311Q8N616 119 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 Q8N8P6 123 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 ANAPC13Q9BS18 74 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 TRAV40A0A0B4J280 105 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 K7EMI3 77 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 TNFRSF6BO95407 300 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 IL4P05112 153 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 RPL27AP46776 148 aaKnown RBP8.81□□□□□ -1
PCAT29-201ENST00000558411 CXCL12P48061 93 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 PDE6HQ13956 83 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 TMEM95Q3KNT9 176 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 CCL13Q99616 98 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 TMEM133Q9H2Q1 129 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 TMEM160Q9NX00 188 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 NAV3Q8IVL0 2385 aa8.81□□□□□ -1
PCAT29-201ENST00000558411 A0A087WX48 190 aa8.8□□□□□ -1
PCAT29-201ENST00000558411 TMSB15BA0A087X1C1 80 aa8.8□□□□□ -1
PCAT29-201ENST00000558411 FHL3Q13643 280 aa8.8□□□□□ -1
PCAT29-201ENST00000558411 FAM216BQ8N7L0 139 aa8.8□□□□□ -1
PCAT29-201ENST00000558411 RPEQ96AT9 228 aa8.8□□□□□ -1
PCAT29-201ENST00000558411 RASL11BQ9BPW5 248 aa8.8□□□□□ -1
PCAT29-201ENST00000558411 MRPL35Q9NZE8 188 aaKnown RBP8.8□□□□□ -1
PCAT29-201ENST00000558411 TMEM262E9PQX1 116 aa8.8□□□□□ -1
PCAT29-201ENST00000558411 MRPS12O15235 138 aaKnown RBP8.8□□□□□ -1
PCAT29-201ENST00000558411 SPRY3O43610 288 aa8.8□□□□□ -1
PCAT29-201ENST00000558411 TEN1Q86WV5 123 aa8.8□□□□□ -1
PCAT29-201ENST00000558411 C17orf77Q96MU5 243 aa8.8□□□□□ -1
PCAT29-201ENST00000558411 ASCL2Q99929 193 aa8.8□□□□□ -1
PCAT29-201ENST00000558411 AAMDCQ9H7C9 122 aa8.8□□□□□ -1
PCAT29-201ENST00000558411 TPSG1Q9NRR2 321 aa8.8□□□□□ -1
PCAT29-201ENST00000558411 SS18L2Q9UHA2 77 aa8.8□□□□□ -1
PCAT29-201ENST00000558411 MYMXA0A1B0GTQ4 84 aa8.79□□□□□ -1
PCAT29-201ENST00000558411 TNFRSF13BO14836 293 aaPredicted RBP8.79□□□□□ -1
PCAT29-201ENST00000558411 GATA3P23771 443 aa8.79□□□□□ -1
PCAT29-201ENST00000558411 PPIFP30405 207 aaKnown RBP8.79□□□□□ -1
PCAT29-201ENST00000558411 TEX36Q5VZQ5 186 aa8.79□□□□□ -1
PCAT29-201ENST00000558411 ZFAND6Q6FIF0 208 aa8.79□□□□□ -1
PCAT29-201ENST00000558411 CNEP1R1Q8N9A8 125 aa8.79□□□□□ -1
PCAT29-201ENST00000558411 MYOZ3Q8TDC0 251 aa8.79□□□□□ -1
PCAT29-201ENST00000558411 SPRY4Q9C004 299 aa8.79□□□□□ -1
PCAT29-201ENST00000558411 RALYQ9UKM9 306 aaKnown RBP8.79□□□□□ -1
PCAT29-201ENST00000558411 COL27A1Q8IZC6 1860 aaPredicted RBP8.78□□□□□ -1
PCAT29-201ENST00000558411 IGLV2-18A0A075B6J9 118 aa8.78□□□□□ -1
PCAT29-201ENST00000558411 WT1P19544 449 aaPredicted RBP8.78□□□□□ -1
PCAT29-201ENST00000558411 CD40P25942 277 aa8.78□□□□□ -1
PCAT29-201ENST00000558411 SBSPONQ8IVN8 264 aa8.78□□□□□ -1
PCAT29-201ENST00000558411 AGRNO00468 2067 aa8.78□□□□□ -1
PCAT29-201ENST00000558411 IGLV3-9A0A075B6K5 115 aa8.78□□□□□ -1
PCAT29-201ENST00000558411 TRAV12-1A0A0B4J245 112 aa8.78□□□□□ -1
PCAT29-201ENST00000558411 EGR2P11161 476 aaPredicted RBP8.78□□□□□ -1
PCAT29-201ENST00000558411 GLRXP35754 106 aa8.78□□□□□ -1
PCAT29-201ENST00000558411 UBE2D3P61077 147 aa8.78□□□□□ -1
PCAT29-201ENST00000558411 UBE2D2P62837 147 aa8.78□□□□□ -1
PCAT29-201ENST00000558411 ZDBF2Q9HCK1 2354 aa8.77□□□□□ -1
PCAT29-201ENST00000558411 IGHV3-21A0A0B4J1V1 117 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 I3L2K1 104 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 TECTAO75443 2155 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 RBP4P02753 201 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 CRYGBP07316 175 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 ZNF688P0C7X2 276 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 TEX29Q8N6K0 151 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 DEFB108BQ8NET1 73 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 GLMPQ8WWB7 406 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 CARD19Q96LW7 228 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 FAM110AQ9BQ89 295 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 SLC25A15Q9Y619 301 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 HEATR1Q9H583 2144 aaKnown RBP8.77□□□□□ -1.01
PCAT29-201ENST00000558411 M0R3E3 92 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 IGKV1-17P01599 117 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 UBE2D1P51668 147 aa8.77□□□□□ -1.01
PCAT29-201ENST00000558411 TNFAIP6P98066 277 aaPredicted RBP8.77□□□□□ -1.01
PCAT29-201ENST00000558411 PMS2CLQ68D20 193 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms