RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 TAS2R60P59551 318 aa8.44□□□□□ -1.06
HERC1-202ENST00000558324 NHLH2Q02577 135 aa8.44□□□□□ -1.06
HERC1-202ENST00000558324 THAP6Q8TBB0 222 aa8.44□□□□□ -1.06
HERC1-202ENST00000558324 SAT2Q96F10 170 aaPredicted RBP8.44□□□□□ -1.06
HERC1-202ENST00000558324 FAM210BQ96KR6 192 aa8.44□□□□□ -1.06
HERC1-202ENST00000558324 ZNF586Q9NXT0 402 aa8.44□□□□□ -1.06
HERC1-202ENST00000558324 PTTG2Q9NZH5 202 aa8.44□□□□□ -1.06
HERC1-202ENST00000558324 OR5AC2Q9NZP5 309 aa8.44□□□□□ -1.06
HERC1-202ENST00000558324 IGLV2-18A0A075B6J9 118 aa8.43□□□□□ -1.06
HERC1-202ENST00000558324 PLAC8L1A1L4L8 177 aa8.43□□□□□ -1.06
HERC1-202ENST00000558324 LYRM9A8MSI8 78 aa8.43□□□□□ -1.06
HERC1-202ENST00000558324 INMT-MINDY4F8WBC2 141 aa8.43□□□□□ -1.06
HERC1-202ENST00000558324 TSPOP30536 169 aa8.43□□□□□ -1.06
HERC1-202ENST00000558324 CLINT1Q14677 625 aa8.43□□□□□ -1.06
HERC1-202ENST00000558324 GUK1Q16774 197 aa8.43□□□□□ -1.06
HERC1-202ENST00000558324 ATP6V1FQ16864 119 aa8.43□□□□□ -1.06
HERC1-202ENST00000558324 GCSAMLQ5JQS6 135 aa8.43□□□□□ -1.06
HERC1-202ENST00000558324 GFI1BQ5VTD9 330 aa8.43□□□□□ -1.06
HERC1-202ENST00000558324 TMEM256Q8N2U0 113 aa8.43□□□□□ -1.06
HERC1-202ENST00000558324 OR5C1Q8NGR4 320 aa8.43□□□□□ -1.06
HERC1-202ENST00000558324 C16orf74Q96GX8 76 aa8.43□□□□□ -1.06
HERC1-202ENST00000558324 NPCDR1Q9BY65 106 aa8.43□□□□□ -1.06
HERC1-202ENST00000558324 F5H768 121 aa8.42□□□□□ -1.06
HERC1-202ENST00000558324 M0R3E3 92 aa8.42□□□□□ -1.06
HERC1-202ENST00000558324 RLN2P04090 185 aa8.42□□□□□ -1.06
HERC1-202ENST00000558324 PYYP10082 97 aa8.42□□□□□ -1.06
HERC1-202ENST00000558324 BLNKQ8WV28 456 aa8.42□□□□□ -1.06
HERC1-202ENST00000558324 TRBV19A0A075B6N1 114 aa8.41□□□□□ -1.06
HERC1-202ENST00000558324 E5RGE8 158 aa8.41□□□□□ -1.06
HERC1-202ENST00000558324 H0YIZ8 118 aa8.41□□□□□ -1.06
HERC1-202ENST00000558324 H7BYZ3 331 aa8.41□□□□□ -1.06
HERC1-202ENST00000558324 PRAF2O60831 178 aa8.41□□□□□ -1.06
HERC1-202ENST00000558324 MPDU1O75352 247 aa8.41□□□□□ -1.06
HERC1-202ENST00000558324 CT45A10P0DMU9 189 aa8.41□□□□□ -1.06
HERC1-202ENST00000558324 NMES1Q9C002 83 aa8.41□□□□□ -1.06
HERC1-202ENST00000558324 SLC25A31Q9H0C2 315 aa8.41□□□□□ -1.06
HERC1-202ENST00000558324 NOP10Q9NPE3 64 aaKnown RBP8.41□□□□□ -1.06
HERC1-202ENST00000558324 TIMM9Q9Y5J7 89 aa8.41□□□□□ -1.06
HERC1-202ENST00000558324 DNAH2Q9P225 4427 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 TRAV12-3A0A0B4J271 114 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 NPIPB6E9PJ23 425 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 SSNA1O43805 119 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 ZNF253O75346 499 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 NDUFB4O95168 129 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 ATP5G1P05496 136 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 LEPP41159 167 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 ATP5G3P48201 142 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 H2BFSP57053 126 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 ERCC8Q13216 396 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 MIR17HGQ75NE6 70 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 EXOC3-AS1Q8N2X6 119 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 RNASE8Q8TDE3 154 aaKnown RBP8.4□□□□□ -1.06
HERC1-202ENST00000558324 TMEM263Q8WUH6 116 aaKnown RBP8.4□□□□□ -1.06
HERC1-202ENST00000558324 CHAC2Q8WUX2 184 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 TMEM14CQ9P0S9 112 aa8.4□□□□□ -1.06
HERC1-202ENST00000558324 TIMM8BQ9Y5J9 83 aaPredicted RBP8.4□□□□□ -1.06
HERC1-202ENST00000558324 HECTD4Q9Y4D8 3996 aa8.39□□□□□ -1.07
HERC1-202ENST00000558324 NUDT3O95989 172 aa8.39□□□□□ -1.07
HERC1-202ENST00000558324 HIST1H1EP10412 219 aaKnown RBP8.39□□□□□ -1.07
HERC1-202ENST00000558324 DEFA1P59665 94 aa8.39□□□□□ -1.07
HERC1-202ENST00000558324 DEFA3P59666 94 aa8.39□□□□□ -1.07
HERC1-202ENST00000558324 ZNF493Q6ZR52 646 aa8.39□□□□□ -1.07
HERC1-202ENST00000558324 CCDC28AQ8IWP9 274 aa8.39□□□□□ -1.07
HERC1-202ENST00000558324 C15orf53Q8NAA6 179 aa8.39□□□□□ -1.07
HERC1-202ENST00000558324 PPP1R1CQ8WVI7 109 aa8.39□□□□□ -1.07
HERC1-202ENST00000558324 C20orf144Q9BQM9 153 aa8.39□□□□□ -1.07
HERC1-202ENST00000558324 SLC25A2Q9BXI2 301 aa8.39□□□□□ -1.07
HERC1-202ENST00000558324 IGKV2-40A0A087WW87 121 aaPredicted RBP8.38□□□□□ -1.07
HERC1-202ENST00000558324 CBY3A6NI87 242 aa8.38□□□□□ -1.07
HERC1-202ENST00000558324 IGKV2D-40P01614 121 aaPredicted RBP8.38□□□□□ -1.07
HERC1-202ENST00000558324 CYCSP99999 105 aaKnown RBP8.38□□□□□ -1.07
HERC1-202ENST00000558324 ICAM4Q14773 271 aa8.38□□□□□ -1.07
HERC1-202ENST00000558324 RNF212Q495C1 297 aa8.38□□□□□ -1.07
HERC1-202ENST00000558324 FAM122CQ6P4D5 195 aa8.38□□□□□ -1.07
HERC1-202ENST00000558324 LINC00336Q6ZUF6 198 aa8.38□□□□□ -1.07
HERC1-202ENST00000558324 MRPL53Q96EL3 112 aaKnown RBP8.38□□□□□ -1.07
HERC1-202ENST00000558324 ODF3Q96PU9 254 aa8.38□□□□□ -1.07
HERC1-202ENST00000558324 ATG101Q9BSB4 218 aa8.38□□□□□ -1.07
HERC1-202ENST00000558324 MARVELD1Q9BSK0 173 aa8.38□□□□□ -1.07
HERC1-202ENST00000558324 SMIM3Q9BZL3 60 aa8.38□□□□□ -1.07
HERC1-202ENST00000558324 WDR61Q9GZS3 305 aaKnown RBP8.38□□□□□ -1.07
HERC1-202ENST00000558324 AAMDCQ9H7C9 122 aa8.38□□□□□ -1.07
HERC1-202ENST00000558324 KCNIP2Q9NS61 270 aa8.38□□□□□ -1.07
HERC1-202ENST00000558324 FAT2Q9NYQ8 4349 aa8.38□□□□□ -1.07
HERC1-202ENST00000558324 GAGE12BA1L429 117 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 PRSS29PA6NIE9 313 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 SNURFLB1AK76 121 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 RTL8CO15255 209 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 GAGE7O76087 117 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 OR10J4P0C629 311 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 GAGE12FP0CL80 117 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 GAGE12GP0CL81 117 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 GAGE12IP0CL82 117 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 BTN1A1Q13410 526 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 PDE6HQ13956 83 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 LGALS9BQ3B8N2 356 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 FAM167A-AS1Q96KT0 104 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 ATP5SQ99766 215 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 PRELID1Q9Y255 219 aa8.37□□□□□ -1.07
HERC1-202ENST00000558324 C7orf71A4D174 169 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms