RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 APCSP02743 223 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 C1QAP02745 245 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 PRB2P02812 416 aaPredicted RBP2.82□□□□□ -1.96
LRRC28-205ENST00000558248 SRP19P09132 144 aaKnown RBP2.82□□□□□ -1.96
LRRC28-205ENST00000558248 P0C879 139 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 KRTAP5-9P26371 169 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 GABRA2P47869 451 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 AKR1C2P52895 323 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 RPS11P62280 158 aaKnown RBP eCLIP2.82□□□□□ -1.96
LRRC28-205ENST00000558248 HIGD2BQ4VC39 106 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 LCE3CQ5T5A8 94 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 SH2D6Q7Z4S9 175 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 SLC30A7Q8NEW0 376 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 OR51T1Q8NGJ9 327 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 ZNF418Q8TF45 676 aaPredicted RBP2.82□□□□□ -1.96
LRRC28-205ENST00000558248 C1orf147Q96MC9 270 aaPredicted RBP2.82□□□□□ -1.96
LRRC28-205ENST00000558248 ERMAPQ96PL5 475 aaPredicted RBP2.82□□□□□ -1.96
LRRC28-205ENST00000558248 SPIN2AQ99865 258 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 SPIN2BQ9BPZ2 258 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 HDHD3Q9BSH5 251 aaPredicted RBP2.82□□□□□ -1.96
LRRC28-205ENST00000558248 C1QTNF6Q9BXI9 259 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 OR2J1Q9GZK6 312 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 RNF122Q9H9V4 155 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 ZNF286AQ9HBT8 521 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 HIGD1AQ9Y241 93 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 MED31Q9Y3C7 131 aa2.82□□□□□ -1.96
LRRC28-205ENST00000558248 MRPS16Q9Y3D3 137 aaKnown RBP2.82□□□□□ -1.96
LRRC28-205ENST00000558248 AMMECR1Q9Y4X0 333 aaPredicted RBP2.82□□□□□ -1.96
LRRC28-205ENST00000558248 IGKV3D-11A0A0A0MRZ8 115 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 IGHV3-43A0A0B4J1X8 118 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 TRAV5A0A0B4J249 113 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 IGKV1-6A0A0C4DH72 117 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 DHRS12A0PJE2 317 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 DPRXA6NFQ7 191 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 SRRM5B3KS81 715 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 OVOL1O14753 267 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 IGKV1-39P01597 117 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 IGKV1D-39P04432 117 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 ATP6V0CP27449 155 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 EVX1P49640 407 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 WNT4P56705 351 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 TAS2R45P59539 299 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 KRTAP10-3P60369 221 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 FGF12P61328 243 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 MRPS10P82664 201 aaKnown RBP2.81□□□□□ -1.96
LRRC28-205ENST00000558248 HIST1H1AQ02539 215 aaPredicted RBP2.81□□□□□ -1.96
LRRC28-205ENST00000558248 RELAQ04206 551 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 ZNF791Q3KP31 576 aaPredicted RBP2.81□□□□□ -1.96
LRRC28-205ENST00000558248 RNASE10Q5GAN6 216 aaKnown RBP2.81□□□□□ -1.96
LRRC28-205ENST00000558248 NCMAPQ5T1S8 102 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 TIFABQ6ZNK6 161 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 GPHB5Q86YW7 130 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 TCTE3Q8IZS6 198 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 OR8I2Q8N0Y5 310 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 CNEP1R1Q8N9A8 125 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 OR4A5Q8NH83 315 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 RHOXF1Q8NHV9 184 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 C16orf74Q96GX8 76 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 TEX37Q96LM6 180 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 TM2D3Q9BRN9 247 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 GNG8Q9UK08 70 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 TRAPPC2LQ9UL33 140 aa2.81□□□□□ -1.96
LRRC28-205ENST00000558248 BOKQ9UMX3 212 aaPredicted RBP2.81□□□□□ -1.96
LRRC28-205ENST00000558248 EPPK1P58107 5090 aaKnown RBP2.81□□□□□ -1.96
LRRC28-205ENST00000558248 A0A087WUU8 490 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 TRAV38-1A0A0B4J264 116 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 IZUMO1RA6ND01 250 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 C9JCJ5 164 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 J3QR89 54 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 OR1I1O60431 355 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 METTL15P1P0C7V9 234 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 ZNF823P16415 610 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 ZNF25P17030 456 aaPredicted RBP2.8□□□□□ -1.96
LRRC28-205ENST00000558248 ELK1P19419 428 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 S100A11P31949 105 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 LPAR6P43657 344 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 CRISP3P54108 245 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 TAS2R30P59541 319 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 PLCXD2Q0VAA5 305 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 RTL8BQ17RB0 113 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 DEFB134Q4QY38 66 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 FAM104BQ5XKR9 115 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 PCP2Q8IVA1 136 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 PDZD9Q8IXQ8 264 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 H1FOOQ8IZA3 346 aaPredicted RBP2.8□□□□□ -1.96
LRRC28-205ENST00000558248 ZNF433Q8N7K0 673 aaPredicted RBP2.8□□□□□ -1.96
LRRC28-205ENST00000558248 ZNF709Q8N972 641 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 RBMXL1Q96E39 390 aaKnown RBP2.8□□□□□ -1.96
LRRC28-205ENST00000558248 TP53RKQ96S44 253 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 TBL1YQ9BQ87 522 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 MND1Q9BWT6 205 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 AICDAQ9GZX7 198 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 TUBA4BQ9H853 241 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 CACYBPQ9HB71 228 aaKnown RBP2.8□□□□□ -1.96
LRRC28-205ENST00000558248 RPS10P5Q9NQ39 176 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 CKLFQ9UBR5 152 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 NAT8BQ9UHF3 227 aa2.8□□□□□ -1.96
LRRC28-205ENST00000558248 PCTPQ9UKL6 214 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms