RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 TRAV12-2A0A075B6T6 113 aa6.53□□□□□ -1.36
SPG11-207ENST00000558138 KANTRA0A1W2PQU2 76 aa6.53□□□□□ -1.36
SPG11-207ENST00000558138 HMGB3O15347 200 aaKnown RBP6.53□□□□□ -1.36
SPG11-207ENST00000558138 PFDN1O60925 122 aa6.53□□□□□ -1.36
SPG11-207ENST00000558138 ZNF253O75346 499 aa6.53□□□□□ -1.36
SPG11-207ENST00000558138 EIF3GO75821 320 aaKnown RBP eCLIP6.53□□□□□ -1.36
SPG11-207ENST00000558138 GIG44P09565 113 aaPredicted RBP6.53□□□□□ -1.36
SPG11-207ENST00000558138 HTN1P15515 57 aa6.53□□□□□ -1.36
SPG11-207ENST00000558138 ATP6V0CP27449 155 aa6.53□□□□□ -1.36
SPG11-207ENST00000558138 TSPOP30536 169 aa6.53□□□□□ -1.36
SPG11-207ENST00000558138 ICAM4Q14773 271 aa6.53□□□□□ -1.36
SPG11-207ENST00000558138 FAM74A1Q5RGS3 127 aa6.53□□□□□ -1.36
SPG11-207ENST00000558138 AKR1C8PQ5T2L2 129 aa6.53□□□□□ -1.36
SPG11-207ENST00000558138 RPL7L1Q6DKI1 246 aaKnown RBP6.53□□□□□ -1.36
SPG11-207ENST00000558138 BAP18Q8IXM2 172 aa6.53□□□□□ -1.36
SPG11-207ENST00000558138 OR2G3Q8NGZ4 309 aa6.53□□□□□ -1.36
SPG11-207ENST00000558138 CMTM2Q8TAZ6 248 aa6.53□□□□□ -1.36
SPG11-207ENST00000558138 CLUHP3Q96NS8 147 aa6.53□□□□□ -1.36
SPG11-207ENST00000558138 PSMG3Q9BT73 122 aaPredicted RBP6.53□□□□□ -1.36
SPG11-207ENST00000558138 C11orf68Q9H3H3 251 aaKnown RBP6.53□□□□□ -1.36
SPG11-207ENST00000558138 TENM3Q9P273 2699 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 RNF222A6NCQ9 220 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 NUPR2A6NF83 97 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 ZNF705EA8MWA4 302 aaPredicted RBP6.52□□□□□ -1.37
SPG11-207ENST00000558138 M0R3E3 92 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 TAAR5O14804 337 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 JTBO76095 146 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 LEPP41159 167 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 CDKN1BP46527 198 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 NANOS2P60321 138 aaKnown RBP6.52□□□□□ -1.37
SPG11-207ENST00000558138 RANP62826 216 aaKnown RBP6.52□□□□□ -1.37
SPG11-207ENST00000558138 RRN3P1Q2M238 152 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 TMEM78Q5T7P6 136 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 PQLC2Q6ZP29 291 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 CSNK1G2-AS1Q8NCQ2 148 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 FXYD5Q96DB9 178 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 MRPL53Q96EL3 112 aaKnown RBP6.52□□□□□ -1.37
SPG11-207ENST00000558138 SAT2Q96F10 170 aaPredicted RBP6.52□□□□□ -1.37
SPG11-207ENST00000558138 PHYHIPLQ96FC7 376 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 FAM167A-AS1Q96KT0 104 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 HYLS1Q96M11 299 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 IGF2BP2-AS1Q96M15 143 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 LINC01587Q99440 93 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 ARPC5LQ9BPX5 153 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 ACTR3CQ9C0K3 210 aaPredicted RBP6.52□□□□□ -1.37
SPG11-207ENST00000558138 SH3BGRL3Q9H299 93 aa6.52□□□□□ -1.37
SPG11-207ENST00000558138 KLK5Q9Y337 293 aaPredicted RBP6.52□□□□□ -1.37
SPG11-207ENST00000558138 LOC102723971A0A1B0GUV8 181 aa6.51□□□□□ -1.37
SPG11-207ENST00000558138 TMEM189A5PLL7 270 aa6.51□□□□□ -1.37
SPG11-207ENST00000558138 SMIM9A6NGZ8 99 aa6.51□□□□□ -1.37
SPG11-207ENST00000558138 PRAC2D3DTV9 90 aa6.51□□□□□ -1.37
SPG11-207ENST00000558138 NDUFB4O95168 129 aa6.51□□□□□ -1.37
SPG11-207ENST00000558138 SERF2P84101 59 aa6.51□□□□□ -1.37
SPG11-207ENST00000558138 ERCC8Q13216 396 aa6.51□□□□□ -1.37
SPG11-207ENST00000558138 RPP25LQ8N5L8 163 aaKnown RBP6.51□□□□□ -1.37
SPG11-207ENST00000558138 Q8NAQ8 132 aa6.51□□□□□ -1.37
SPG11-207ENST00000558138 ZNF471Q9BX82 626 aaPredicted RBP6.51□□□□□ -1.37
SPG11-207ENST00000558138 Q9H3A6 140 aa6.51□□□□□ -1.37
SPG11-207ENST00000558138 X6R8D5 127 aa6.51□□□□□ -1.37
SPG11-207ENST00000558138 STAB2Q8WWQ8 2551 aa6.51□□□□□ -1.37
SPG11-207ENST00000558138 IGKV2-40A0A087WW87 121 aaPredicted RBP6.5□□□□□ -1.37
SPG11-207ENST00000558138 ZNF705GA8MUZ8 300 aaPredicted RBP6.5□□□□□ -1.37
SPG11-207ENST00000558138 IGKV2D-40P01614 121 aaPredicted RBP6.5□□□□□ -1.37
SPG11-207ENST00000558138 RBMY1A1P0DJD3 496 aaKnown RBP6.5□□□□□ -1.37
SPG11-207ENST00000558138 RBMY1CP0DJD4 496 aa6.5□□□□□ -1.37
SPG11-207ENST00000558138 ARL14EPLP0DKL9 152 aa6.5□□□□□ -1.37
SPG11-207ENST00000558138 EIF5AP63241 154 aaKnown RBP6.5□□□□□ -1.37
SPG11-207ENST00000558138 RBMY1FQ15415 496 aaKnown RBP6.5□□□□□ -1.37
SPG11-207ENST00000558138 AMTNQ6UX39 209 aa6.5□□□□□ -1.37
SPG11-207ENST00000558138 ZNF705AQ6ZN79 300 aaPredicted RBP6.5□□□□□ -1.37
SPG11-207ENST00000558138 TMEM256Q8N2U0 113 aa6.5□□□□□ -1.37
SPG11-207ENST00000558138 PHLDA1Q8WV24 401 aaPredicted RBP6.5□□□□□ -1.37
SPG11-207ENST00000558138 NIPSNAP3BQ9BS92 247 aa6.5□□□□□ -1.37
SPG11-207ENST00000558138 HUWE1Q7Z6Z7 4374 aaKnown RBP6.5□□□□□ -1.37
SPG11-207ENST00000558138 A0A0D9SG52 128 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 TEX48A0A1B0GUV7 120 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 PGPA6NDG6 321 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 NPIPB6E9PJ23 425 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 G3V3Q6 166 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 CXorf1O96002 111 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 SPART-AS1P0CW21 52 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 ZNF345Q14585 488 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 ZNF767PQ75MW2 155 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 AKAP14Q86UN6 197 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 CCDC28AQ8IWP9 274 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 C1orf158Q8N1D5 194 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 LYPD1Q8N2G4 141 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 KCNRGQ8N5I3 272 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 RXFP4Q8TDU9 374 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 RAB24Q969Q5 203 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 LINC00477Q96M19 166 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 NEU1Q99519 415 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 OTORQ9NRC9 128 aa6.49□□□□□ -1.37
SPG11-207ENST00000558138 TRAV12-3A0A0B4J271 114 aa6.48□□□□□ -1.37
SPG11-207ENST00000558138 HMSDA8MTL9 139 aa6.48□□□□□ -1.37
SPG11-207ENST00000558138 A8MTW9 85 aa6.48□□□□□ -1.37
SPG11-207ENST00000558138 CRXO43186 299 aaPredicted RBP6.48□□□□□ -1.37
SPG11-207ENST00000558138 BCL2L11O43521 198 aa6.48□□□□□ -1.37
SPG11-207ENST00000558138 SLC25A5P05141 298 aaKnown RBP6.48□□□□□ -1.37
SPG11-207ENST00000558138 GPX1P07203 203 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms