RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 TCTE3Q8IZS6 198 aa0.92□□□□□ -2.26
GPHN-216ENST00000557678 OR5AS1Q8N127 324 aa0.92□□□□□ -2.26
GPHN-216ENST00000557678 Q8N814 137 aa0.92□□□□□ -2.26
GPHN-216ENST00000557678 OR51A4Q8NGJ6 313 aa0.92□□□□□ -2.26
GPHN-216ENST00000557678 DIRC1Q969H9 104 aa0.92□□□□□ -2.26
GPHN-216ENST00000557678 BORCS5Q969J3 196 aa0.92□□□□□ -2.26
GPHN-216ENST00000557678 OR4C12Q96R67 309 aa0.92□□□□□ -2.26
GPHN-216ENST00000557678 TMEM138Q9NPI0 162 aa0.92□□□□□ -2.26
GPHN-216ENST00000557678 KLK9Q9UKQ9 250 aa0.92□□□□□ -2.26
GPHN-216ENST00000557678 TPRKBQ9Y3C4 175 aa0.92□□□□□ -2.26
GPHN-216ENST00000557678 SNURFQ9Y675 71 aa0.92□□□□□ -2.26
GPHN-216ENST00000557678 PLXNA4Q9HCM2 1894 aa0.92□□□□□ -2.26
GPHN-216ENST00000557678 BAHCC1Q9P281 2608 aa0.92□□□□□ -2.26
GPHN-216ENST00000557678 PRRC2BQ5JSZ5 2229 aaKnown RBP0.92□□□□□ -2.26
GPHN-216ENST00000557678 BAZ2BQ9UIF8 2168 aaKnown RBP0.91□□□□□ -2.26
GPHN-216ENST00000557678 POLEQ07864 2286 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 RGS12O14924 1447 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.91□□□□□ -2.26
GPHN-216ENST00000557678 LOC107986453A0A1B0GWG9 222 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 ARPC5O15511 151 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 OR2H2O95918 312 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 CXCL8P10145 99 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 CMPK1P30085 196 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 RPL22P35268 128 aaKnown RBP0.91□□□□□ -2.26
GPHN-216ENST00000557678 MAXP61244 160 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 CDK5R1Q15078 307 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 DEFB115Q30KQ5 88 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 DEFB113Q30KQ7 82 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 FAM74A1Q5RGS3 127 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 HAGHLQ6PII5 290 aaPredicted RBP0.91□□□□□ -2.26
GPHN-216ENST00000557678 CLECL1Q8IZS7 167 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 MORN4Q8NDC4 146 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 OR5AK2Q8NH90 309 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 CCL4L1Q8NHW4 92 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 NAT14Q8WUY8 206 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 RAB37Q96AX2 223 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 CBLN4Q9NTU7 201 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 ORMDL1Q9P0S3 153 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 COPZ2Q9P299 210 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 INTS1Q8N201 2190 aaKnown RBP0.91□□□□□ -2.26
GPHN-216ENST00000557678 VWDEQ8N2E2 1590 aa0.91□□□□□ -2.26
GPHN-216ENST00000557678 DSPPQ9NZW4 1301 aa0.9□□□□□ -2.26
GPHN-216ENST00000557678 ZFC3H1O60293 1989 aaKnown RBP0.9□□□□□ -2.26
GPHN-216ENST00000557678 COL24A1Q17RW2 1714 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 MYH1P12882 1939 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 IGKV2D-26A0A0A0MRZ7 120 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 TRBV6-8A0A0A6YYG3 113 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 PNMA8CA0A1B0GUJ8 204 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 ZNF736B4DX44 427 aaPredicted RBP0.9□□□□□ -2.27
GPHN-216ENST00000557678 C9JAW5 83 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 UQCRQO14949 82 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 TNFSF15O95150 251 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 IGLV1-51P01701 117 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 TRACP01848 142 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 PAEPP09466 180 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 RNASE3P12724 160 aaKnown RBP0.9□□□□□ -2.27
GPHN-216ENST00000557678 CRYGSP22914 178 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 ZNF93P35789 620 aaPredicted RBP0.9□□□□□ -2.27
GPHN-216ENST00000557678 CKS1BP61024 79 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 PCOTHQ58A44 107 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.9□□□□□ -2.27
GPHN-216ENST00000557678 ZNF833PQ6ZTB9 187 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 TEN1Q86WV5 123 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 DEFB119Q8N690 84 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 TEX29Q8N6K0 151 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 OR4S1Q8NGB4 309 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 OR10AG1Q8NH19 301 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 ZNF563Q8TA94 476 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 BRK1Q8WUW1 75 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 TCEAL4Q96EI5 215 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 AP1S3Q96PC3 154 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 PFDN5Q99471 154 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 REG4Q9BYZ8 158 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 CALML5Q9NZT1 146 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 HIGD1AQ9Y241 93 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 CHCHD2Q9Y6H1 151 aaPredicted RBP0.9□□□□□ -2.27
GPHN-216ENST00000557678 TANC2Q9HCD6 1990 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 MYOFQ9NZM1 2061 aa0.9□□□□□ -2.27
GPHN-216ENST00000557678 OVOS2A0A0J9YW53 1432 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 FAM135BQ49AJ0 1406 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 OVOS2Q6IE36 1432 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 FREM3P0C091 2139 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 HEATR1Q9H583 2144 aaKnown RBP0.89□□□□□ -2.27
GPHN-216ENST00000557678 ARFGEF3Q5TH69 2177 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 KIAA1549Q9HCM3 1950 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 LAMB4A4D0S4 1761 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 COL4A1P02462 1669 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 USP54Q70EL1 1684 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 KDM5CP41229 1560 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 IGKV2-40A0A087WW87 121 aaPredicted RBP0.89□□□□□ -2.27
GPHN-216ENST00000557678 A0A096LPI6 279 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 IGKV3D-7A0A0C4DH55 119 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 IGKV3OR2-268A0A0C4DH90 116 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 CCDC160A6NGH7 325 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 YPEL1O60688 119 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 SMIM24O75264 130 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 IGKV2D-40P01614 121 aaPredicted RBP0.89□□□□□ -2.27
GPHN-216ENST00000557678 COX7CP15954 63 aa0.89□□□□□ -2.27
GPHN-216ENST00000557678 HIST1H1BP16401 226 aaKnown RBP0.89□□□□□ -2.27
GPHN-216ENST00000557678 SDC4P31431 198 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms