RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 NRARPQ7Z6K4 114 aa11.11□□□□□ -0.63
TUBB3-213ENST00000557262 RNF141Q8WVD5 230 aa11.11□□□□□ -0.63
TUBB3-213ENST00000557262 C5orf51A6NDU8 294 aa11.1□□□□□ -0.63
TUBB3-213ENST00000557262 FAM24AA6NFZ4 105 aa11.1□□□□□ -0.63
TUBB3-213ENST00000557262 CAV2P51636 162 aa11.1□□□□□ -0.63
TUBB3-213ENST00000557262 CLINT1Q14677 625 aa11.1□□□□□ -0.63
TUBB3-213ENST00000557262 GUK1Q16774 197 aa11.1□□□□□ -0.63
TUBB3-213ENST00000557262 MIC13Q5XKP0 118 aa11.1□□□□□ -0.63
TUBB3-213ENST00000557262 OR1L4Q8NGR5 311 aa11.1□□□□□ -0.63
TUBB3-213ENST00000557262 PARD6GQ9BYG4 376 aaPredicted RBP11.1□□□□□ -0.63
TUBB3-213ENST00000557262 LINC00588Q9Y4M8 146 aa11.1□□□□□ -0.63
TUBB3-213ENST00000557262 TRAV5A0A0B4J249 113 aa11.09□□□□□ -0.63
TUBB3-213ENST00000557262 CST7O76096 145 aa11.09□□□□□ -0.63
TUBB3-213ENST00000557262 PVALBP20472 110 aaPredicted RBP11.09□□□□□ -0.63
TUBB3-213ENST00000557262 OR5I1Q13606 314 aa11.09□□□□□ -0.63
TUBB3-213ENST00000557262 GFI1BQ5VTD9 330 aa11.09□□□□□ -0.63
TUBB3-213ENST00000557262 ZNF575Q86XF7 245 aa11.09□□□□□ -0.63
TUBB3-213ENST00000557262 C6orf223Q8N319 242 aa11.09□□□□□ -0.63
TUBB3-213ENST00000557262 C12orf45Q8N5I9 185 aaPredicted RBP11.09□□□□□ -0.63
TUBB3-213ENST00000557262 LINC00612Q8N6U2 182 aa11.09□□□□□ -0.63
TUBB3-213ENST00000557262 ZNF431Q8TF32 576 aaPredicted RBP11.09□□□□□ -0.63
TUBB3-213ENST00000557262 C2orf50Q96LR7 162 aa11.09□□□□□ -0.63
TUBB3-213ENST00000557262 C11orf1Q9H5F2 150 aa11.09□□□□□ -0.63
TUBB3-213ENST00000557262 UQCC1Q9NVA1 299 aa11.09□□□□□ -0.63
TUBB3-213ENST00000557262 WDR83OSQ9Y284 106 aa11.09□□□□□ -0.63
TUBB3-213ENST00000557262 TRAV6A0A075B6T7 132 aa11.08□□□□□ -0.64
TUBB3-213ENST00000557262 CT45A10P0DMU9 189 aa11.08□□□□□ -0.64
TUBB3-213ENST00000557262 S100A11P31949 105 aa11.08□□□□□ -0.64
TUBB3-213ENST00000557262 RPL29P47914 159 aaKnown RBP11.08□□□□□ -0.64
TUBB3-213ENST00000557262 TNP2Q05952 138 aa11.08□□□□□ -0.64
TUBB3-213ENST00000557262 SSX7Q7RTT5 188 aa11.08□□□□□ -0.64
TUBB3-213ENST00000557262 GNPNAT1Q96EK6 184 aaPredicted RBP11.08□□□□□ -0.64
TUBB3-213ENST00000557262 ODF3Q96PU9 254 aa11.08□□□□□ -0.64
TUBB3-213ENST00000557262 PFDN5Q99471 154 aa11.08□□□□□ -0.64
TUBB3-213ENST00000557262 SNURFLB1AK76 121 aa11.07□□□□□ -0.64
TUBB3-213ENST00000557262 NPIPB6E9PJ23 425 aa11.07□□□□□ -0.64
TUBB3-213ENST00000557262 J3KRW8 73 aa11.07□□□□□ -0.64
TUBB3-213ENST00000557262 RLN2P04090 185 aa11.07□□□□□ -0.64
TUBB3-213ENST00000557262 LEPP41159 167 aa11.07□□□□□ -0.64
TUBB3-213ENST00000557262 VWC2Q2TAL6 325 aa11.07□□□□□ -0.64
TUBB3-213ENST00000557262 CHAC2Q8WUX2 184 aa11.07□□□□□ -0.64
TUBB3-213ENST00000557262 ZNF503Q96F45 646 aa11.07□□□□□ -0.64
TUBB3-213ENST00000557262 SEC22CQ9BRL7 303 aa11.07□□□□□ -0.64
TUBB3-213ENST00000557262 Q9H8V8 135 aa11.07□□□□□ -0.64
TUBB3-213ENST00000557262 SLC39A9Q9NUM3 307 aa11.07□□□□□ -0.64
TUBB3-213ENST00000557262 ZNF586Q9NXT0 402 aa11.07□□□□□ -0.64
TUBB3-213ENST00000557262 TRAV26-1A0A087WT03 109 aa11.06□□□□□ -0.64
TUBB3-213ENST00000557262 TRAV12-3A0A0B4J271 114 aa11.06□□□□□ -0.64
TUBB3-213ENST00000557262 GAGE12BA1L429 117 aa11.06□□□□□ -0.64
TUBB3-213ENST00000557262 ZNF253O75346 499 aa11.06□□□□□ -0.64
TUBB3-213ENST00000557262 GAGE7O76087 117 aa11.06□□□□□ -0.64
TUBB3-213ENST00000557262 GAGE12FP0CL80 117 aa11.06□□□□□ -0.64
TUBB3-213ENST00000557262 GAGE12GP0CL81 117 aa11.06□□□□□ -0.64
TUBB3-213ENST00000557262 GAGE12IP0CL82 117 aa11.06□□□□□ -0.64
TUBB3-213ENST00000557262 M6PRP20645 277 aa11.06□□□□□ -0.64
TUBB3-213ENST00000557262 SULT1A1P50225 295 aa11.06□□□□□ -0.64
TUBB3-213ENST00000557262 IL15RAQ13261 267 aa11.06□□□□□ -0.64
TUBB3-213ENST00000557262 RXFP4Q8TDU9 374 aa11.06□□□□□ -0.64
TUBB3-213ENST00000557262 PYGO2Q9BRQ0 406 aa11.06□□□□□ -0.64
TUBB3-213ENST00000557262 LYRM2Q9NU23 88 aaPredicted RBP11.06□□□□□ -0.64
TUBB3-213ENST00000557262 NUDT15Q9NV35 164 aa11.06□□□□□ -0.64
TUBB3-213ENST00000557262 ABCA13Q86UQ4 5058 aa11.05□□□□□ -0.64
TUBB3-213ENST00000557262 H2AFB2P0C5Z0 115 aa11.05□□□□□ -0.64
TUBB3-213ENST00000557262 BAXQ07812 192 aa11.05□□□□□ -0.64
TUBB3-213ENST00000557262 ATP6V1FQ16864 119 aa11.05□□□□□ -0.64
TUBB3-213ENST00000557262 TMEM252Q8N6L7 170 aa11.05□□□□□ -0.64
TUBB3-213ENST00000557262 MRPL53Q96EL3 112 aaKnown RBP11.05□□□□□ -0.64
TUBB3-213ENST00000557262 TRBV19A0A075B6N1 114 aa11.04□□□□□ -0.64
TUBB3-213ENST00000557262 A0A0J9YY99 117 aa11.04□□□□□ -0.64
TUBB3-213ENST00000557262 H3BNG1 76 aa11.04□□□□□ -0.64
TUBB3-213ENST00000557262 SLC25A5P05141 298 aaKnown RBP11.04□□□□□ -0.64
TUBB3-213ENST00000557262 HIST1H1EP10412 219 aaKnown RBP11.04□□□□□ -0.64
TUBB3-213ENST00000557262 HOXA5P20719 270 aa11.04□□□□□ -0.64
TUBB3-213ENST00000557262 S100A10P60903 97 aa11.04□□□□□ -0.64
TUBB3-213ENST00000557262 HBG1P69891 147 aa11.04□□□□□ -0.64
TUBB3-213ENST00000557262 HBG2P69892 147 aa11.04□□□□□ -0.64
TUBB3-213ENST00000557262 DAZ2Q13117 558 aaKnown RBP11.04□□□□□ -0.64
TUBB3-213ENST00000557262 RAB32Q13637 225 aa11.04□□□□□ -0.64
TUBB3-213ENST00000557262 STX12Q86Y82 276 aa11.04□□□□□ -0.64
TUBB3-213ENST00000557262 LINC00477Q96M19 166 aa11.04□□□□□ -0.64
TUBB3-213ENST00000557262 NDUFA13Q9P0J0 144 aa11.04□□□□□ -0.64
TUBB3-213ENST00000557262 TMEM14CQ9P0S9 112 aa11.04□□□□□ -0.64
TUBB3-213ENST00000557262 PRELID1Q9Y255 219 aa11.04□□□□□ -0.64
TUBB3-213ENST00000557262 HSPG2P98160 4391 aa11.03□□□□□ -0.64
TUBB3-213ENST00000557262 UBE2L5PA0A1B0GUS4 154 aa11.03□□□□□ -0.64
TUBB3-213ENST00000557262 IGSF23A1L1A6 192 aa11.03□□□□□ -0.64
TUBB3-213ENST00000557262 C16orf90A8MZG2 172 aa11.03□□□□□ -0.64
TUBB3-213ENST00000557262 TIMM9Q9Y5J7 89 aa11.03□□□□□ -0.64
TUBB3-213ENST00000557262 M0R3E3 92 aa11.02□□□□□ -0.65
TUBB3-213ENST00000557262 MPDU1O75352 247 aa11.02□□□□□ -0.65
TUBB3-213ENST00000557262 NDUFB4O95168 129 aa11.02□□□□□ -0.65
TUBB3-213ENST00000557262 FGF7P21781 194 aa11.02□□□□□ -0.65
TUBB3-213ENST00000557262 ERCC8Q13216 396 aa11.02□□□□□ -0.65
TUBB3-213ENST00000557262 ESRGQ1W209 222 aa11.02□□□□□ -0.65
TUBB3-213ENST00000557262 Q6ZTI0 123 aa11.02□□□□□ -0.65
TUBB3-213ENST00000557262 CCDC32Q9BV29 185 aa11.02□□□□□ -0.65
TUBB3-213ENST00000557262 FAM240BA0A1B0GVZ2 78 aa11.01□□□□□ -0.65
TUBB3-213ENST00000557262 C7orf71A4D174 169 aa11.01□□□□□ -0.65
TUBB3-213ENST00000557262 ZNF324O75467 553 aaPredicted RBP11.01□□□□□ -0.65
TUBB3-213ENST00000557262 PDE6HQ13956 83 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms