RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 SUMO1P63165 101 aaKnown RBP7.25□□□□□ -1.25
TMEM260-213ENST00000556929 CCL20P78556 96 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 PMS2P11Q13670 270 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 ODF3L2Q3SX64 289 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 CLLU1Q5K131 121 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 CST9LP1Q5W188 147 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 IGFL4Q6B9Z1 124 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 EBLN2Q6P2I7 272 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 RNF182Q8N6D2 247 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 ARL6IP6Q8N6S5 226 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 PCNPQ8WW12 178 aaKnown RBP7.25□□□□□ -1.25
TMEM260-213ENST00000556929 TXNDC17Q9BRA2 123 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 GNG13Q9P2W3 67 aa7.25□□□□□ -1.25
TMEM260-213ENST00000556929 RGS13O14921 159 aa7.24□□□□□ -1.25
TMEM260-213ENST00000556929 SLC25A5P05141 298 aaKnown RBP7.24□□□□□ -1.25
TMEM260-213ENST00000556929 TNP2Q05952 138 aa7.24□□□□□ -1.25
TMEM260-213ENST00000556929 KPRPQ5T749 579 aaPredicted RBP7.24□□□□□ -1.25
TMEM260-213ENST00000556929 FOXI2Q6ZQN5 318 aa7.24□□□□□ -1.25
TMEM260-213ENST00000556929 C5orf17Q8NAS9 161 aa7.24□□□□□ -1.25
TMEM260-213ENST00000556929 RPUSD4Q96CM3 377 aaKnown RBP7.24□□□□□ -1.25
TMEM260-213ENST00000556929 C20orf173Q96LM9 149 aa7.24□□□□□ -1.25
TMEM260-213ENST00000556929 PRR25Q96S07 402 aa7.24□□□□□ -1.25
TMEM260-213ENST00000556929 YTHDF2Q9Y5A9 579 aaKnown RBP7.24□□□□□ -1.25
TMEM260-213ENST00000556929 SERTM2A0A1B0GWG4 89 aa7.23□□□□□ -1.25
TMEM260-213ENST00000556929 C11orf94C9JXX5 98 aa7.23□□□□□ -1.25
TMEM260-213ENST00000556929 F6UZH7 168 aa7.23□□□□□ -1.25
TMEM260-213ENST00000556929 K7EQM0 130 aa7.23□□□□□ -1.25
TMEM260-213ENST00000556929 M0R3E3 92 aa7.23□□□□□ -1.25
TMEM260-213ENST00000556929 DUSP14O95147 198 aaKnown RBP7.23□□□□□ -1.25
TMEM260-213ENST00000556929 HAGHQ16775 308 aa7.23□□□□□ -1.25
TMEM260-213ENST00000556929 APRG1Q8IVJ8 170 aa7.23□□□□□ -1.25
TMEM260-213ENST00000556929 Q8N1Y9 231 aa7.23□□□□□ -1.25
TMEM260-213ENST00000556929 TCEAL7Q9BRU2 100 aa7.23□□□□□ -1.25
TMEM260-213ENST00000556929 SAV1Q9H4B6 383 aaPredicted RBP7.23□□□□□ -1.25
TMEM260-213ENST00000556929 C19orf73Q9NVV2 129 aa7.23□□□□□ -1.25
TMEM260-213ENST00000556929 VAX2Q9UIW0 290 aa7.23□□□□□ -1.25
TMEM260-213ENST00000556929 RPH3ALQ9UNE2 315 aa7.23□□□□□ -1.25
TMEM260-213ENST00000556929 SORL1Q92673 2214 aa7.23□□□□□ -1.25
TMEM260-213ENST00000556929 DNHD1Q96M86 4753 aa7.23□□□□□ -1.25
TMEM260-213ENST00000556929 RBFOX3A6NFN3 312 aa7.22□□□□□ -1.25
TMEM260-213ENST00000556929 ZNF705FA8MVS1 300 aaPredicted RBP7.22□□□□□ -1.25
TMEM260-213ENST00000556929 GGTLC3B5MD39 225 aa7.22□□□□□ -1.25
TMEM260-213ENST00000556929 DIRC3C9JPN6 131 aa7.22□□□□□ -1.25
TMEM260-213ENST00000556929 BCL2P10415 239 aa7.22□□□□□ -1.25
TMEM260-213ENST00000556929 ATP5G3P48201 142 aa7.22□□□□□ -1.25
TMEM260-213ENST00000556929 MEF2BQ02080 365 aaPredicted RBP7.22□□□□□ -1.25
TMEM260-213ENST00000556929 STHQ8IWL8 128 aa7.22□□□□□ -1.25
TMEM260-213ENST00000556929 DEFB125Q8N687 156 aa7.22□□□□□ -1.25
TMEM260-213ENST00000556929 OR8A1Q8NGG7 326 aa7.22□□□□□ -1.25
TMEM260-213ENST00000556929 OR10J6PQ8NGY7 276 aa7.22□□□□□ -1.25
TMEM260-213ENST00000556929 HIST1H2BAQ96A08 127 aa7.22□□□□□ -1.25
TMEM260-213ENST00000556929 FAM210AQ96ND0 272 aa7.22□□□□□ -1.25
TMEM260-213ENST00000556929 EIF5A2Q9GZV4 153 aaKnown RBP7.22□□□□□ -1.25
TMEM260-213ENST00000556929 EPDR1Q9UM22 224 aa7.22□□□□□ -1.25
TMEM260-213ENST00000556929 PKD1L1Q8TDX9 2849 aa7.22□□□□□ -1.25
TMEM260-213ENST00000556929 A0A0J9YX75 114 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 LOC100996750A0A140TA64 210 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 LOC102723971A0A1B0GUV8 181 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 RBAKDNA6NC62 111 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 KNCNA6PVL3 124 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 F6UB75 175 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 PDE6DO43924 150 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 TCRAP04437 139 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 HLA-DRB4P13762 266 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 HIST1H1AQ02539 215 aaPredicted RBP7.21□□□□□ -1.26
TMEM260-213ENST00000556929 ZNF124Q15973 351 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 TOR2AQ5JU69 321 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 ACTL10Q5JWF8 245 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 TMEM78Q5T7P6 136 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 CCDC28AQ8IWP9 274 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 CYB561D1Q8N8Q1 229 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 ATG101Q9BSB4 218 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 KRTAP4-6Q9BYQ5 205 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 TUBA4BQ9H853 241 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 SRD5A3Q9H8P0 318 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 AURKAIP1Q9NWT8 199 aaPredicted RBP7.21□□□□□ -1.26
TMEM260-213ENST00000556929 PPP1R14DQ9NXH3 145 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 HLA-DRB4X5D2U9 266 aa7.21□□□□□ -1.26
TMEM260-213ENST00000556929 FBLL1A6NHQ2 334 aaKnown RBP7.2□□□□□ -1.26
TMEM260-213ENST00000556929 PRAC2D3DTV9 90 aa7.2□□□□□ -1.26
TMEM260-213ENST00000556929 PEX7O00628 323 aa7.2□□□□□ -1.26
TMEM260-213ENST00000556929 DEFB1P60022 68 aa7.2□□□□□ -1.26
TMEM260-213ENST00000556929 GNG5P63218 68 aa7.2□□□□□ -1.26
TMEM260-213ENST00000556929 ZNF506Q5JVG8 444 aa7.2□□□□□ -1.26
TMEM260-213ENST00000556929 GDF5OSQ5U4N7 250 aa7.2□□□□□ -1.26
TMEM260-213ENST00000556929 C9orf47Q6ZRZ4 202 aa7.2□□□□□ -1.26
TMEM260-213ENST00000556929 GOLT1AQ6ZVE7 132 aa7.2□□□□□ -1.26
TMEM260-213ENST00000556929 OR4B1Q8NGF8 309 aa7.2□□□□□ -1.26
TMEM260-213ENST00000556929 LINC00477Q96M19 166 aa7.2□□□□□ -1.26
TMEM260-213ENST00000556929 WFDC10AQ9H1F0 79 aa7.2□□□□□ -1.26
TMEM260-213ENST00000556929 DNAH3Q8TD57 4116 aa7.19□□□□□ -1.26
TMEM260-213ENST00000556929 IGKV2-40A0A087WW87 121 aaPredicted RBP7.19□□□□□ -1.26
TMEM260-213ENST00000556929 LOC102724200A0A096LPH7 203 aaPredicted RBP7.19□□□□□ -1.26
TMEM260-213ENST00000556929 A8MZ25 164 aa7.19□□□□□ -1.26
TMEM260-213ENST00000556929 NPIPB6E9PJ23 425 aa7.19□□□□□ -1.26
TMEM260-213ENST00000556929 H3BMM0 161 aa7.19□□□□□ -1.26
TMEM260-213ENST00000556929 NDUFS6O75380 124 aaKnown RBP7.19□□□□□ -1.26
TMEM260-213ENST00000556929 IGKV2D-40P01614 121 aaPredicted RBP7.19□□□□□ -1.26
TMEM260-213ENST00000556929 S100A9P06702 114 aaKnown RBP7.19□□□□□ -1.26
TMEM260-213ENST00000556929 ZNF705DP0CH99 300 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms