RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 CACFD1Q9UGQ2 172 aa3.31□□□□□ -1.88
HIF1A-209ENST00000556827 IGLV2-18A0A075B6J9 118 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 LOC100131303A0A0U1RQF7 123 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 C16orf90A8MZG2 172 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 HBE1P02100 147 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 FABP1P07148 127 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 SLC25A4P12235 298 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 CRYBB3P26998 211 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 HLA-DMAP28067 261 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 RCVRNP35243 200 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 HRH1P35367 487 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 GABARAPL2P60520 117 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 TRIM16LQ309B1 348 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 TIGITQ495A1 244 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 SPINK9Q5DT21 86 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 UBE2NLQ5JXB2 153 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 EBLN2Q6P2I7 272 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 IZUMO2Q6UXV1 221 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 OR5H6Q8NGV6 325 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 OR4X1Q8NH49 305 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 COQ8AQ8NI60 647 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 SEC22AQ96IW7 307 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 TMEM208Q9BTX3 173 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 GOLT1BQ9Y3E0 138 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 RFNGQ9Y644 331 aa3.3□□□□□ -1.88
HIF1A-209ENST00000556827 CEBPZOSA8MTT3 80 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 INS-IGF2F8WCM5 200 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 F8WDY8 70 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 H3BMM0 161 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 B3GALNT1O75752 331 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 RD3LP0DJH9 198 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 OR10J1P30954 320 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 S100A7P31151 101 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 ETV6P41212 452 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 HTR2BP41595 481 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 RPL5P46777 297 aaKnown RBP3.29□□□□□ -1.88
HIF1A-209ENST00000556827 YPEL3P61236 119 aaPredicted RBP3.29□□□□□ -1.88
HIF1A-209ENST00000556827 DAD1P61803 113 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 LAGE3Q14657 143 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 SAMD13Q5VXD3 122 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 SPATA31B1PQ5VZV4 182 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 FAM24BQ8N5W8 94 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 CCDC71LQ8N9Z2 235 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 C15orf53Q8NAA6 179 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 OR4B1Q8NGF8 309 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 OR1S2Q8NGQ3 325 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 ZFAND1Q8TCF1 268 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 RNASEH2CQ8TDP1 164 aaKnown RBP3.29□□□□□ -1.88
HIF1A-209ENST00000556827 DCANP1Q8TF63 244 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 PPP1R14BQ96C90 147 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 LINC00052Q96N35 136 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 NIPSNAP3BQ9BS92 247 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 PPDPFQ9H3Y8 114 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 VCX3AQ9NNX9 186 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.29□□□□□ -1.88
HIF1A-209ENST00000556827 COPZ2Q9P299 210 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 RAB26Q9ULW5 256 aa3.29□□□□□ -1.88
HIF1A-209ENST00000556827 TNCP24821 2201 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 C3orf85A0A1B0GTC6 90 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 GABARAPH6UMI1 98 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 GABARAPO95166 117 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 TNFAIP8O95379 198 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 CD74P04233 296 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 IL4P05112 153 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 RNASE2P10153 161 aaKnown RBP3.28□□□□□ -1.88
HIF1A-209ENST00000556827 HLA-DRB4P13762 266 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 RND2P52198 227 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 CCL18P55774 89 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 PIGPP57054 158 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 SPCS3P61009 180 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 CLINT1Q14677 625 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 OXA1LQ15070 435 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 RRN3P1Q2M238 152 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 RNASE10Q5GAN6 216 aaKnown RBP3.28□□□□□ -1.88
HIF1A-209ENST00000556827 FAM222AQ5U5X8 452 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 C15orf40Q8WUR7 153 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 ACY3Q96HD9 319 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 FXYD6Q9H0Q3 95 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 MAGT1Q9H0U3 335 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 HLA-DRB4X5D2U9 266 aa3.28□□□□□ -1.88
HIF1A-209ENST00000556827 EPPK1P58107 5090 aaKnown RBP3.27□□□□□ -1.89
HIF1A-209ENST00000556827 IGHV1OR15-1A0A075B7D0 117 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 ZNF705FA8MVS1 300 aaPredicted RBP3.27□□□□□ -1.89
HIF1A-209ENST00000556827 SNRPGP15A8MWD9 76 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 ANKRD65E5RJM6 399 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 IGKV1-39P01597 117 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 IGKV1-17P01599 117 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 IGKV1D-39P04432 117 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 ZNF705DP0CH99 300 aaPredicted RBP3.27□□□□□ -1.89
HIF1A-209ENST00000556827 ZNF705BP0CI00 300 aaPredicted RBP3.27□□□□□ -1.89
HIF1A-209ENST00000556827 TBPP20226 339 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 PSMB3P49720 205 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 B2MP61769 119 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 PSG9Q00887 426 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 NEDD8Q15843 81 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 ZNF705AQ6ZN79 300 aaPredicted RBP3.27□□□□□ -1.89
HIF1A-209ENST00000556827 FOXI2Q6ZQN5 318 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 SNX29P2Q8IUI4 249 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 ARRDC1Q8N5I2 433 aa3.27□□□□□ -1.89
HIF1A-209ENST00000556827 OR51G1Q8NGK1 321 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms