RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 ZNF835Q9Y2P0 537 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 ARL2-SNX15V9GYD0 113 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 MIA3Q5JRA6 1907 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 ANKRD12Q6UB98 2062 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 DOCK9Q9BZ29 2069 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 GLI3P10071 1580 aa2.57□□□□□ -2
PRPF39-210ENST00000556718 ANKRD36A6QL64 1941 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 MYO18AQ92614 2054 aaKnown RBP2.56□□□□□ -2
PRPF39-210ENST00000556718 TRAV8-3A0A0A6YYJ7 113 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 LOC102725191A0A1B0GVB3 256 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 A0A1B0GXF2 115 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 ZNF878C9JN71 531 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 F5H5K5 113 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 H3BP45 60 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 M0QXV9 152 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 CDC42EP2O14613 210 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 CNIH1O95406 144 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 LHBP01229 141 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 IGHV1-46P01743 117 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 ISG15P05161 165 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 HMGN2P05204 90 aaKnown RBP2.56□□□□□ -2
PRPF39-210ENST00000556718 GYPBP06028 91 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 HIST1H1EP10412 219 aaKnown RBP2.56□□□□□ -2
PRPF39-210ENST00000556718 HIST1H1CP16403 213 aaKnown RBP2.56□□□□□ -2
PRPF39-210ENST00000556718 CRYBB3P26998 211 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 ZNF93P35789 620 aaPredicted RBP2.56□□□□□ -2
PRPF39-210ENST00000556718 LINC00315P59091 139 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 UBE2G1P62253 170 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 SUPT4H1P63272 117 aaKnown RBP2.56□□□□□ -2
PRPF39-210ENST00000556718 LRRC75BQ2VPJ9 315 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 BVES-AS1Q5T3Y7 98 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 FAM104BQ5XKR9 115 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 ZFAND6Q6FIF0 208 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 RASL11AQ6T310 242 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 LHFPL1Q86WI0 220 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 TTC9CQ8N5M4 171 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 TMEM251Q8N6I4 163 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 TEX29Q8N6K0 151 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 OR4X2Q8NGF9 303 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 OR5C1Q8NGR4 320 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 C18orf32Q8TCD1 76 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 Q96M85 177 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 TMEM70Q9BUB7 260 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 COMMD5Q9GZQ3 224 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 SH3BGRL3Q9H299 93 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 NAA60Q9H7X0 242 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 ZNF286AQ9HBT8 521 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 IL36BQ9NZH7 164 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 MCTS1Q9ULC4 181 aaKnown RBP2.56□□□□□ -2
PRPF39-210ENST00000556718 ANAPC10Q9UM13 185 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 BOKQ9UMX3 212 aaPredicted RBP2.56□□□□□ -2
PRPF39-210ENST00000556718 UFC1Q9Y3C8 167 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 TIMM9Q9Y5J7 89 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 SPCS1Q9Y6A9 102 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 LY96Q9Y6Y9 160 aa2.56□□□□□ -2
PRPF39-210ENST00000556718 A0A0J9YY10 115 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 CXorf51AA0A1B0GTR3 108 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 CTXND1A0A1B0GTU2 59 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 TEX50A0A1B0GTY4 177 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 A0A1B0GX78 115 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 MYBPHLA2RUH7 354 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 OR2T8A6NH00 312 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 LOC285556D6RIA3 1793 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 H0Y980 276 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 LGALS9O00182 355 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 ISLRO14498 428 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 SYNGR1O43759 233 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 PDCD6O75340 191 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 BRI3O95415 125 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 GPR75O95800 540 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 CA2P00918 260 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 SPINK8P0C7L1 97 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 C3orf79P0CE67 100 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 SLC25A6P12236 298 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 SIP14410 1827 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 ALOX5APP20292 161 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 SSR2P43308 183 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 DYNLT3P51808 116 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 PDCD11Q14690 1871 aaKnown RBP2.55□□□□□ -2
PRPF39-210ENST00000556718 TRIP11Q15643 1979 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 PARP14Q460N5 1801 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 MRPL2Q5T653 305 aaKnown RBP2.55□□□□□ -2
PRPF39-210ENST00000556718 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 FOXI2Q6ZQN5 318 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 HMGN2P46Q86SG4 172 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 BOD1L2Q8IYS8 172 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 OSR2Q8N2R0 312 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 DOCK8Q8NF50 2099 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 OR13C6PQ8NH95 151 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 LMX1AQ8TE12 382 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 LSM10Q969L4 123 aaKnown RBP2.55□□□□□ -2
PRPF39-210ENST00000556718 PTH2Q96A98 100 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 RSPO3Q9BXY4 272 aaPredicted RBP2.55□□□□□ -2
PRPF39-210ENST00000556718 PECRQ9BY49 303 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 WDR54Q9H977 334 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 NPVFQ9HCQ7 196 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 KCNIP2Q9NS61 270 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 MED29Q9NX70 200 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 TAS2R4Q9NYW5 299 aa2.55□□□□□ -2
PRPF39-210ENST00000556718 CABIN1Q9Y6J0 2220 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms