RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 NAV3Q8IVL0 2385 aa4.09□□□□□ -1.76
TMEM260-210ENST00000556422 BAHCC1Q9P281 2608 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 NDUFA7O95182 113 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 CSN1S1P47710 185 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 RND2P52198 227 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 PMAIP1Q13794 54 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 KIR2DL4Q99706 377 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 LINC00574Q9H8X3 128 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 HILPDAQ9Y5L2 63 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 COL6A6A6NMZ7 2263 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 H7C1H1 209 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 BMPR1BO00238 502 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 SERF1AO75920 110 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 IGKV1D-33P01593 117 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 IGKV1-33P01594 117 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 GYPAP02724 150 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 CD164Q04900 197 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 SPINK9Q5DT21 86 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 VKORC1L1Q8N0U8 176 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 Q8N7P7 452 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 CCL13Q99616 98 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 PMCHL2Q9BQD1 86 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 TMEM242Q9NWH2 141 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 TP53TG1Q9Y2A0 90 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 U3KQE9 123 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 SAA2-SAA4A0A096LPE2 208 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 C17orf100A8MU93 164 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 GGTLC3B5MD39 225 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 SLC25A5P05141 298 aaKnown RBP4.08□□□□□ -1.76
TMEM260-210ENST00000556422 CRYGDP07320 174 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 SAA2P0DJI9 122 aaPredicted RBP4.08□□□□□ -1.76
TMEM260-210ENST00000556422 DIAPH2-AS1Q14236 149 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 LCN12Q6JVE5 192 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 DEFB108BQ8NET1 73 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 CLDND2Q8NHS1 167 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 RND1Q92730 232 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 VGLL1Q99990 258 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 TMEM147Q9BVK8 224 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 ZNRD1Q9P1U0 126 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 ZNF256Q9Y2P7 627 aaPredicted RBP4.08□□□□□ -1.76
TMEM260-210ENST00000556422 PLXNB1O43157 2135 aa4.08□□□□□ -1.76
TMEM260-210ENST00000556422 TRAV3A0A0B4J244 114 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 TRAV1-1A0A0B4J248 108 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 UBE2L5PA0A1B0GUS4 154 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 C15orf62A8K5M9 175 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 SHISA9B4DS77 424 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 GCSHP23434 173 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 PFN2P35080 140 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 ICAM4Q14773 271 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 KIR3DS1Q14943 382 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 TRPT1Q86TN4 253 aaKnown RBP4.07□□□□□ -1.76
TMEM260-210ENST00000556422 ANKRD29Q8N6D5 301 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 WFDC11Q8NEX6 87 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 TAF15Q92804 592 aaKnown RBP eCLIP4.07□□□□□ -1.76
TMEM260-210ENST00000556422 NEUROG1Q92886 237 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 SPTBN1Q01082 2364 aaKnown RBP4.07□□□□□ -1.76
TMEM260-210ENST00000556422 CELSR1Q9NYQ6 3014 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 OOSP1A8MZH6 123 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 FGF6P10767 208 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 CA7P43166 264 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 HBG1P69891 147 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 HBG2P69892 147 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 KLRB1Q12918 225 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 C2orf48Q96LS8 159 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 ZNF665Q9H7R5 613 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 C21orf62Q9NYP8 219 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 CFAP46Q8IYW2 2715 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 A0A087WWL8 130 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 DPM2O94777 84 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 HBE1P02100 147 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 SRP19P09132 144 aaKnown RBP4.07□□□□□ -1.76
TMEM260-210ENST00000556422 GATA2P23769 480 aaPredicted RBP4.07□□□□□ -1.76
TMEM260-210ENST00000556422 CNTFRP26992 372 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 LINC01561Q8N1V8 128 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 RPP25LQ8N5L8 163 aaKnown RBP4.07□□□□□ -1.76
TMEM260-210ENST00000556422 OR4F17Q8NGA8 305 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 OR4F4Q96R69 305 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 FOXC2Q99958 501 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 MLST8Q9BVC4 326 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 KLF12Q9Y4X4 402 aa4.07□□□□□ -1.76
TMEM260-210ENST00000556422 YTHDF2Q9Y5A9 579 aaKnown RBP4.07□□□□□ -1.76
TMEM260-210ENST00000556422 CSMD2Q7Z408 3487 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 E7EQL1 145 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 FCN1O00602 326 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 SERF2P84101 59 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 ZNF90Q03938 601 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 TFF3Q07654 80 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 CDSNQ15517 529 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 STPG3Q8N7X2 389 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 MALRD1Q5VYJ5 2156 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 USP17L23D6RBM5 183 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 TMEM178BH3BS89 294 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 NUPR1O60356 82 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 SMIM13P0DJ93 91 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 DEFA4P12838 97 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 IGLL1P15814 213 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 TMEM136Q6ZRR5 245 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 SLC25A48Q6ZT89 311 aaKnown RBP4.06□□□□□ -1.76
TMEM260-210ENST00000556422 OR10G8Q8NGN5 311 aa4.06□□□□□ -1.76
TMEM260-210ENST00000556422 NPIPB3Q92617 1050 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms