RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 CEACAM4O75871 244 aa12□□□□□ -0.49
ARHGEF40-207ENST00000556399 IGLC1P0CG04 106 aa12□□□□□ -0.49
ARHGEF40-207ENST00000556399 CYSLTR1Q9Y271 337 aa12□□□□□ -0.49
ARHGEF40-207ENST00000556399 ZNF256Q9Y2P7 627 aaPredicted RBP12□□□□□ -0.49
ARHGEF40-207ENST00000556399 COL8A2P25067 703 aa12□□□□□ -0.49
ARHGEF40-207ENST00000556399 PAPPA-AS1Q5QFB9 102 aa12□□□□□ -0.49
ARHGEF40-207ENST00000556399 PATE2Q6UY27 113 aa12□□□□□ -0.49
ARHGEF40-207ENST00000556399 FAM167A-AS1Q96KT0 104 aa12□□□□□ -0.49
ARHGEF40-207ENST00000556399 PAX1P15863 534 aa12□□□□□ -0.49
ARHGEF40-207ENST00000556399 ERCC8Q13216 396 aa12□□□□□ -0.49
ARHGEF40-207ENST00000556399 LGALS9BQ3B8N2 356 aa12□□□□□ -0.49
ARHGEF40-207ENST00000556399 CD300EQ496F6 205 aaPredicted RBP12□□□□□ -0.49
ARHGEF40-207ENST00000556399 LGALS9CQ6DKI2 356 aa12□□□□□ -0.49
ARHGEF40-207ENST00000556399 GTSF1LQ9H1H1 148 aa12□□□□□ -0.49
ARHGEF40-207ENST00000556399 MED12LQ86YW9 2145 aa12□□□□□ -0.49
ARHGEF40-207ENST00000556399 LHBP01229 141 aa11.99□□□□□ -0.49
ARHGEF40-207ENST00000556399 PLNP26678 52 aa11.99□□□□□ -0.49
ARHGEF40-207ENST00000556399 IGHV2-70DA0A0C4DH43 119 aa11.99□□□□□ -0.49
ARHGEF40-207ENST00000556399 SIGLEC15Q6ZMC9 328 aa11.99□□□□□ -0.49
ARHGEF40-207ENST00000556399 VMO1Q7Z5L0 202 aa11.99□□□□□ -0.49
ARHGEF40-207ENST00000556399 E7EQL1 145 aa11.99□□□□□ -0.49
ARHGEF40-207ENST00000556399 H3BRN7 92 aa11.99□□□□□ -0.49
ARHGEF40-207ENST00000556399 SNRPD3P62318 126 aaKnown RBP11.99□□□□□ -0.49
ARHGEF40-207ENST00000556399 ZNF747Q9BV97 191 aa11.99□□□□□ -0.49
ARHGEF40-207ENST00000556399 CEP350Q5VT06 3117 aa11.99□□□□□ -0.49
ARHGEF40-207ENST00000556399 MED13Q9UHV7 2174 aa11.98□□□□□ -0.49
ARHGEF40-207ENST00000556399 K7EP13 123 aa11.98□□□□□ -0.49
ARHGEF40-207ENST00000556399 DEFB125Q8N687 156 aa11.98□□□□□ -0.49
ARHGEF40-207ENST00000556399 EML6Q6ZMW3 1958 aa11.98□□□□□ -0.49
ARHGEF40-207ENST00000556399 TRAV40A0A0B4J280 105 aa11.98□□□□□ -0.49
ARHGEF40-207ENST00000556399 RNASE8Q8TDE3 154 aaKnown RBP11.98□□□□□ -0.49
ARHGEF40-207ENST00000556399 THBDP07204 575 aa11.98□□□□□ -0.49
ARHGEF40-207ENST00000556399 CEACAM8P31997 349 aaPredicted RBP11.98□□□□□ -0.49
ARHGEF40-207ENST00000556399 PIMREGQ9BSJ6 248 aa11.98□□□□□ -0.49
ARHGEF40-207ENST00000556399 PROP1O75360 226 aa11.98□□□□□ -0.49
ARHGEF40-207ENST00000556399 ADAMTSL5Q6ZMM2 481 aa11.98□□□□□ -0.49
ARHGEF40-207ENST00000556399 PAX8Q06710 450 aa11.97□□□□□ -0.49
ARHGEF40-207ENST00000556399 LINC00527Q9UJ94 153 aa11.97□□□□□ -0.49
ARHGEF40-207ENST00000556399 EML5Q05BV3 1969 aa11.97□□□□□ -0.49
ARHGEF40-207ENST00000556399 WDR87Q6ZQQ6 2873 aa11.97□□□□□ -0.49
ARHGEF40-207ENST00000556399 H7C1H1 209 aa11.97□□□□□ -0.49
ARHGEF40-207ENST00000556399 CDKN1BP46527 198 aa11.97□□□□□ -0.49
ARHGEF40-207ENST00000556399 C17orf77Q96MU5 243 aa11.97□□□□□ -0.49
ARHGEF40-207ENST00000556399 TMEM8BA6NDV4 472 aa11.97□□□□□ -0.49
ARHGEF40-207ENST00000556399 K7EP34 96 aa11.97□□□□□ -0.49
ARHGEF40-207ENST00000556399 LY6HO94772 140 aa11.97□□□□□ -0.49
ARHGEF40-207ENST00000556399 NPYP01303 97 aa11.97□□□□□ -0.49
ARHGEF40-207ENST00000556399 CD7P09564 240 aa11.97□□□□□ -0.49
ARHGEF40-207ENST00000556399 PRR25Q96S07 402 aa11.97□□□□□ -0.49
ARHGEF40-207ENST00000556399 FAM215AQ9Y5M1 114 aa11.97□□□□□ -0.49
ARHGEF40-207ENST00000556399 ATP5J2P56134 94 aa11.96□□□□□ -0.49
ARHGEF40-207ENST00000556399 GEMIN7Q9H840 131 aaKnown RBP11.96□□□□□ -0.49
ARHGEF40-207ENST00000556399 MALRD1Q5VYJ5 2156 aa11.96□□□□□ -0.5
ARHGEF40-207ENST00000556399 NDPQ00604 133 aa11.96□□□□□ -0.5
ARHGEF40-207ENST00000556399 FAM120AOSQ5T036 256 aa11.96□□□□□ -0.5
ARHGEF40-207ENST00000556399 ZNF503Q96F45 646 aa11.96□□□□□ -0.5
ARHGEF40-207ENST00000556399 DAZAP2Q15038 168 aaPredicted RBP11.95□□□□□ -0.5
ARHGEF40-207ENST00000556399 ZNF562Q6V9R5 426 aa11.95□□□□□ -0.5
ARHGEF40-207ENST00000556399 VCX2Q9H322 139 aa11.95□□□□□ -0.5
ARHGEF40-207ENST00000556399 GP9P14770 177 aa11.95□□□□□ -0.5
ARHGEF40-207ENST00000556399 RNF182Q8N6D2 247 aa11.95□□□□□ -0.5
ARHGEF40-207ENST00000556399 OOSP1A8MZH6 123 aa11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 OVOL1O14753 267 aa11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 NDUFB8O95169 186 aa11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 EIF4EBP1Q13541 118 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 DEFB104AQ8WTQ1 72 aa11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 GTSF1Q8WW33 167 aa11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 TP53TG3Q9ULZ0 132 aa11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 C22orf46C9J442 243 aa11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 K7EM74 188 aa11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 M0R1W7 72 aa11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 C10orf142B7Z368 130 aa11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 CIRBPQ14011 172 aaKnown RBP11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 MINOS1Q5TGZ0 78 aa11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 C14orf178Q8N769 122 aaPredicted RBP11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 MINOS1-NBL1R4GNA1 71 aa11.94□□□□□ -0.5
ARHGEF40-207ENST00000556399 TRAV8-2A0A0B4J237 113 aa11.93□□□□□ -0.5
ARHGEF40-207ENST00000556399 A0A1W2PPM0 123 aa11.93□□□□□ -0.5
ARHGEF40-207ENST00000556399 ZNF491Q8N8L2 437 aa11.93□□□□□ -0.5
ARHGEF40-207ENST00000556399 DPH3P1Q9H4G8 78 aa11.93□□□□□ -0.5
ARHGEF40-207ENST00000556399 A8MWV9 139 aa11.93□□□□□ -0.5
ARHGEF40-207ENST00000556399 DKK2Q9UBU2 259 aa11.93□□□□□ -0.5
ARHGEF40-207ENST00000556399 IL17RELQ6ZVW7 336 aa11.93□□□□□ -0.5
ARHGEF40-207ENST00000556399 SCRT2Q9NQ03 307 aa11.93□□□□□ -0.5
ARHGEF40-207ENST00000556399 PGPEP1Q9NXJ5 209 aa11.93□□□□□ -0.5
ARHGEF40-207ENST00000556399 Q8N8P6 123 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 TNFRSF18Q9Y5U5 241 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 ABCA4P78363 2273 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 NDUFS7O75251 213 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 IGLV2-8P01709 118 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 WFDC12Q8WWY7 111 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 PLCE1Q9P212 2302 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 TRAV2A0A0B4J234 112 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 TRAV41A0A0B4J266 112 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 E7EUB6 86 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 C9orf139Q6ZV77 190 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 CTSZQ9UBR2 303 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 PRTN3P24158 256 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 CR1LQ2VPA4 569 aa11.92□□□□□ -0.5
ARHGEF40-207ENST00000556399 LINC01545Q5VT33 79 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms