RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 NUP62P37198 522 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-239ENST00000556315 SNCAP37840 140 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 FXYD7P58549 80 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 EIF5AP63241 154 aaKnown RBP3.33□□□□□ -1.88
ATXN3-239ENST00000556315 PSG9Q00887 426 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 ARL16Q0P5N6 197 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 SPATA31B1PQ5VZV4 182 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 STEAP1BQ6NZ63 245 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 ZNF818PQ6ZRF7 136 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 TMUB2Q71RG4 321 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 TMEM17Q86X19 198 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 C1orf158Q8N1D5 194 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 KCNRGQ8N5I3 272 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 C12orf45Q8N5I9 185 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-239ENST00000556315 OR4A16Q8NH70 328 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 MAGT1Q9H0U3 335 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 Q9H3A6 140 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 NRN1Q9NPD7 142 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 SHPKQ9UHJ6 478 aa3.33□□□□□ -1.88
ATXN3-239ENST00000556315 TRAV30A0A087WSZ9 112 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 KANTRA0A1W2PQU2 76 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 RNF222A6NCQ9 220 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 TMEM235A6NFC5 223 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 CORTO00230 105 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 SSX5O60225 188 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 RAB3DO95716 219 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 IGKV3-20P01619 116 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 IGLV2-11P01706 119 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 ATP5G1P05496 136 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 DEFB130BP0DP73 79 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 DEFB130AP0DP74 79 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 PTHLHP12272 177 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 CXCL2P19875 107 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 ID1P41134 155 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 CBX5P45973 191 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 ATP5G3P48201 142 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 SUB1P53999 127 aaKnown RBP eCLIP3.32□□□□□ -1.88
ATXN3-239ENST00000556315 FXYD4P59646 89 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 KRTAP10-1P60331 282 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 B2MP61769 119 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 PRCDQ00LT1 54 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 EIF5AL1Q6IS14 154 aaKnown RBP3.32□□□□□ -1.88
ATXN3-239ENST00000556315 FOXI2Q6ZQN5 318 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 ACOT7LQ6ZUV0 252 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 HOGA1Q86XE5 327 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 CMTM1Q8IZ96 169 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 ZNF709Q8N972 641 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 BEST4Q8NFU0 473 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 OR4B1Q8NGF8 309 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 OR4C16Q8NGL9 310 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 OR4X1Q8NH49 305 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 STOML3Q8TAV4 291 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 Q8WTZ3 238 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 SGK494Q96LW2 274 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 LINC00052Q96N35 136 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 SEC22CQ9BRL7 303 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 UPK3BQ9BT76 320 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 TMEM208Q9BTX3 173 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 ARL6Q9H0F7 186 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 SAV1Q9H4B6 383 aaPredicted RBP3.32□□□□□ -1.88
ATXN3-239ENST00000556315 AUNIPQ9H7T9 357 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 KLK11Q9UBX7 282 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 PRELID1Q9Y255 219 aa3.32□□□□□ -1.88
ATXN3-239ENST00000556315 FLG2Q5D862 2391 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-239ENST00000556315 TRAV18A0A075B6X5 111 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 INS-IGF2F8WCM5 200 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 TAAR5O14804 337 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 BCL2L11O43521 198 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 CFDP00746 253 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-239ENST00000556315 IGKV1-17P01599 117 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 RLN1P04808 185 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 PRSS1P07477 247 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 OR4E1P0C645 316 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 PET100P0DJ07 73 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 H2BFSP57053 126 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 HERV-K104P61576 105 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 FLI1Q01543 452 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-239ENST00000556315 SURF2Q15527 256 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-239ENST00000556315 ESRGQ1W209 222 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 TIGITQ495A1 244 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 SMUG1Q53HV7 270 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 GDF5OSQ5U4N7 250 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 EBLN2Q6P2I7 272 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 DHRS11Q6UWP2 260 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 SIGLEC15Q6ZMC9 328 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 H2BFWTQ7Z2G1 175 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 SMIM29Q86T20 159 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 ZNF546Q86UE3 836 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 IQCF2Q8IXL9 164 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 ARRDC1Q8N5I2 433 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 OR1S2Q8NGQ3 325 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 MITD1Q8WV92 249 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 IGF2BP2-AS1Q96M15 143 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 NMES1Q9C002 83 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 SLC35B3Q9H1N7 401 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 FAM212BQ9NTI7 297 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-239ENST00000556315 ZNF586Q9NXT0 402 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 TNFSF18Q9UNG2 199 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 FLVCR2Q9UPI3 526 aa3.31□□□□□ -1.88
ATXN3-239ENST00000556315 FXYD6-FXYD2A0A087WZ82 144 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms