RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 INSP01308 110 aa10.94□□□□□ -0.66
ACTN1-217ENST00000556203 OR10J4P0C629 311 aa10.94□□□□□ -0.66
ACTN1-217ENST00000556203 PDE6HQ13956 83 aa10.94□□□□□ -0.66
ACTN1-217ENST00000556203 INO80EQ8NBZ0 244 aaPredicted RBP10.94□□□□□ -0.66
ACTN1-217ENST00000556203 FXYD5Q96DB9 178 aa10.94□□□□□ -0.66
ACTN1-217ENST00000556203 TMEM208Q9BTX3 173 aa10.94□□□□□ -0.66
ACTN1-217ENST00000556203 M0R3E3 92 aa10.93□□□□□ -0.66
ACTN1-217ENST00000556203 OR7C2O60412 319 aa10.93□□□□□ -0.66
ACTN1-217ENST00000556203 HBE1P02100 147 aa10.93□□□□□ -0.66
ACTN1-217ENST00000556203 NBEAP1P0C6P0 100 aa10.93□□□□□ -0.66
ACTN1-217ENST00000556203 EMP1P54849 157 aa10.93□□□□□ -0.66
ACTN1-217ENST00000556203 ACOT6Q3I5F7 207 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-217ENST00000556203 EXOC3-AS1Q8N2X6 119 aa10.93□□□□□ -0.66
ACTN1-217ENST00000556203 HSD17B11Q8NBQ5 300 aa10.93□□□□□ -0.66
ACTN1-217ENST00000556203 RNF141Q8WVD5 230 aa10.93□□□□□ -0.66
ACTN1-217ENST00000556203 MRPL53Q96EL3 112 aaKnown RBP10.93□□□□□ -0.66
ACTN1-217ENST00000556203 TNFSF18Q9UNG2 199 aa10.93□□□□□ -0.66
ACTN1-217ENST00000556203 CELA1Q9UNI1 258 aa10.93□□□□□ -0.66
ACTN1-217ENST00000556203 KLK5Q9Y337 293 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-217ENST00000556203 CSMD3Q7Z407 3707 aa10.92□□□□□ -0.66
ACTN1-217ENST00000556203 RNF222A6NCQ9 220 aa10.92□□□□□ -0.66
ACTN1-217ENST00000556203 G3V3Q6 166 aa10.92□□□□□ -0.66
ACTN1-217ENST00000556203 EIF3GO75821 320 aaKnown RBP eCLIP10.92□□□□□ -0.66
ACTN1-217ENST00000556203 M6PRP20645 277 aa10.92□□□□□ -0.66
ACTN1-217ENST00000556203 TAS2R45P59539 299 aa10.92□□□□□ -0.66
ACTN1-217ENST00000556203 KHDC3LQ587J8 217 aa10.92□□□□□ -0.66
ACTN1-217ENST00000556203 ZNF503Q96F45 646 aa10.92□□□□□ -0.66
ACTN1-217ENST00000556203 AAMDCQ9H7C9 122 aa10.92□□□□□ -0.66
ACTN1-217ENST00000556203 PRELID1Q9Y255 219 aa10.92□□□□□ -0.66
ACTN1-217ENST00000556203 LOC102723971A0A1B0GUV8 181 aa10.91□□□□□ -0.66
ACTN1-217ENST00000556203 TMEM189A5PLL7 270 aa10.91□□□□□ -0.66
ACTN1-217ENST00000556203 JTBO76095 146 aa10.91□□□□□ -0.66
ACTN1-217ENST00000556203 CDKN1BP46527 198 aa10.91□□□□□ -0.66
ACTN1-217ENST00000556203 RAB2AP61019 212 aa10.91□□□□□ -0.66
ACTN1-217ENST00000556203 UBE2L3P68036 154 aaKnown RBP10.91□□□□□ -0.66
ACTN1-217ENST00000556203 ICAM4Q14773 271 aa10.91□□□□□ -0.66
ACTN1-217ENST00000556203 RRN3P1Q2M238 152 aa10.91□□□□□ -0.66
ACTN1-217ENST00000556203 RPP25LQ8N5L8 163 aaKnown RBP10.91□□□□□ -0.66
ACTN1-217ENST00000556203 RYR2Q92736 4967 aa10.9□□□□□ -0.66
ACTN1-217ENST00000556203 DYNC2H1Q8NCM8 4307 aaKnown RBP10.9□□□□□ -0.66
ACTN1-217ENST00000556203 A0A1W2PPV4 95 aa10.9□□□□□ -0.66
ACTN1-217ENST00000556203 ZNF705GA8MUZ8 300 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-217ENST00000556203 NPIPB6E9PJ23 425 aa10.9□□□□□ -0.66
ACTN1-217ENST00000556203 SMLR1H3BR10 107 aa10.9□□□□□ -0.66
ACTN1-217ENST00000556203 ATP6V0CP27449 155 aa10.9□□□□□ -0.66
ACTN1-217ENST00000556203 FAM122CQ6P4D5 195 aa10.9□□□□□ -0.66
ACTN1-217ENST00000556203 Q6ZTC4 211 aa10.9□□□□□ -0.66
ACTN1-217ENST00000556203 ZNF767PQ75MW2 155 aa10.9□□□□□ -0.66
ACTN1-217ENST00000556203 OR10G4Q8NGN3 311 aa10.9□□□□□ -0.66
ACTN1-217ENST00000556203 OR10G9Q8NGN4 311 aa10.9□□□□□ -0.66
ACTN1-217ENST00000556203 OR10G7Q8NGN6 311 aa10.9□□□□□ -0.66
ACTN1-217ENST00000556203 PHYHIPLQ96FC7 376 aa10.9□□□□□ -0.66
ACTN1-217ENST00000556203 PSMG3Q9BT73 122 aaPredicted RBP10.9□□□□□ -0.66
ACTN1-217ENST00000556203 C11orf94C9JXX5 98 aa10.89□□□□□ -0.67
ACTN1-217ENST00000556203 ARPC5O15511 151 aa10.89□□□□□ -0.67
ACTN1-217ENST00000556203 PRM2P04554 102 aa10.89□□□□□ -0.67
ACTN1-217ENST00000556203 CT45A10P0DMU9 189 aa10.89□□□□□ -0.67
ACTN1-217ENST00000556203 TSPOP30536 169 aa10.89□□□□□ -0.67
ACTN1-217ENST00000556203 ERCC8Q13216 396 aa10.89□□□□□ -0.67
ACTN1-217ENST00000556203 KIR3DS1Q14943 382 aa10.89□□□□□ -0.67
ACTN1-217ENST00000556203 C12orf74Q32Q52 190 aa10.89□□□□□ -0.67
ACTN1-217ENST00000556203 RPL7L1Q6DKI1 246 aaKnown RBP10.89□□□□□ -0.67
ACTN1-217ENST00000556203 OR2G3Q8NGZ4 309 aa10.89□□□□□ -0.67
ACTN1-217ENST00000556203 LINC01587Q99440 93 aa10.89□□□□□ -0.67
ACTN1-217ENST00000556203 SH3BGRL3Q9H299 93 aa10.89□□□□□ -0.67
ACTN1-217ENST00000556203 SACSQ9NZJ4 4579 aa10.88□□□□□ -0.67
ACTN1-217ENST00000556203 BORCS7-ASMTA0A0B4J1R7 106 aa10.88□□□□□ -0.67
ACTN1-217ENST00000556203 J3KRW8 73 aa10.88□□□□□ -0.67
ACTN1-217ENST00000556203 SPART-AS1P0CW21 52 aa10.88□□□□□ -0.67
ACTN1-217ENST00000556203 LEPP41159 167 aa10.88□□□□□ -0.67
ACTN1-217ENST00000556203 RANP62826 216 aaKnown RBP10.88□□□□□ -0.67
ACTN1-217ENST00000556203 FAM222AQ5U5X8 452 aa10.88□□□□□ -0.67
ACTN1-217ENST00000556203 TMEM256Q8N2U0 113 aa10.88□□□□□ -0.67
ACTN1-217ENST00000556203 ODF3Q96PU9 254 aa10.88□□□□□ -0.67
ACTN1-217ENST00000556203 Q9H3A6 140 aa10.88□□□□□ -0.67
ACTN1-217ENST00000556203 YTHDF2Q9Y5A9 579 aaKnown RBP10.88□□□□□ -0.67
ACTN1-217ENST00000556203 IGKV2-40A0A087WW87 121 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-217ENST00000556203 HMGB3O15347 200 aaKnown RBP10.87□□□□□ -0.67
ACTN1-217ENST00000556203 IGKV2D-40P01614 121 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-217ENST00000556203 CDC34P49427 236 aaPredicted RBP10.87□□□□□ -0.67
ACTN1-217ENST00000556203 GFI1BQ5VTD9 330 aa10.87□□□□□ -0.67
ACTN1-217ENST00000556203 PQLC2Q6ZP29 291 aa10.87□□□□□ -0.67
ACTN1-217ENST00000556203 C2CD4CQ8TF44 421 aa10.87□□□□□ -0.67
ACTN1-217ENST00000556203 AGPAT4-IT1Q9H0P7 198 aa10.87□□□□□ -0.67
ACTN1-217ENST00000556203 DKK2Q9UBU2 259 aa10.87□□□□□ -0.67
ACTN1-217ENST00000556203 TENM2Q9NT68 2774 aa10.87□□□□□ -0.67
ACTN1-217ENST00000556203 TRAV10A0A0B4J240 114 aa10.86□□□□□ -0.67
ACTN1-217ENST00000556203 TEX48A0A1B0GUV7 120 aa10.86□□□□□ -0.67
ACTN1-217ENST00000556203 MBP02144 154 aa10.86□□□□□ -0.67
ACTN1-217ENST00000556203 HTN1P15515 57 aa10.86□□□□□ -0.67
ACTN1-217ENST00000556203 CSN1S1P47710 185 aa10.86□□□□□ -0.67
ACTN1-217ENST00000556203 TAS2R60P59551 318 aa10.86□□□□□ -0.67
ACTN1-217ENST00000556203 SERF2P84101 59 aa10.86□□□□□ -0.67
ACTN1-217ENST00000556203 LYPD1Q8N2G4 141 aa10.86□□□□□ -0.67
ACTN1-217ENST00000556203 GNPNAT1Q96EK6 184 aaPredicted RBP10.86□□□□□ -0.67
ACTN1-217ENST00000556203 LINC00477Q96M19 166 aa10.86□□□□□ -0.67
ACTN1-217ENST00000556203 PLECQ15149 4684 aaKnown RBP10.85□□□□□ -0.67
ACTN1-217ENST00000556203 H7BYZ3 331 aa10.85□□□□□ -0.67
ACTN1-217ENST00000556203 AZU1P20160 251 aa10.85□□□□□ -0.67
ACTN1-217ENST00000556203 C9orf47Q6ZRZ4 202 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms