RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 SNAI2O43623 268 aa8.62□□□□□ -1.03
ACTN1-216ENST00000556083 GUSBP1Q15486 140 aa8.62□□□□□ -1.03
ACTN1-216ENST00000556083 SCN2AQ99250 2005 aa8.62□□□□□ -1.03
ACTN1-216ENST00000556083 C5orf63A6NC05 138 aa8.62□□□□□ -1.03
ACTN1-216ENST00000556083 ANAPC13Q9BS18 74 aa8.62□□□□□ -1.03
ACTN1-216ENST00000556083 DEFB121Q5J5C9 76 aa8.61□□□□□ -1.03
ACTN1-216ENST00000556083 LYPD2Q6UXB3 125 aa8.61□□□□□ -1.03
ACTN1-216ENST00000556083 ZNF493Q6ZR52 646 aa8.61□□□□□ -1.03
ACTN1-216ENST00000556083 C20orf144Q9BQM9 153 aa8.61□□□□□ -1.03
ACTN1-216ENST00000556083 SNRNP200O75643 2136 aaKnown RBP8.61□□□□□ -1.03
ACTN1-216ENST00000556083 ESDP10768 282 aa8.61□□□□□ -1.03
ACTN1-216ENST00000556083 HERVK_113P63121 156 aa8.61□□□□□ -1.03
ACTN1-216ENST00000556083 FOXI2Q6ZQN5 318 aa8.61□□□□□ -1.03
ACTN1-216ENST00000556083 AMN1Q8IY45 258 aa8.61□□□□□ -1.03
ACTN1-216ENST00000556083 NYNRINQ9P2P1 1898 aaKnown RBP8.61□□□□□ -1.03
ACTN1-216ENST00000556083 RHOHQ15669 191 aa8.61□□□□□ -1.03
ACTN1-216ENST00000556083 CR1LQ2VPA4 569 aa8.61□□□□□ -1.03
ACTN1-216ENST00000556083 IGKV3D-20A0A0C4DH25 116 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 IGFL2Q6UWQ7 119 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 LINC00527Q9UJ94 153 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 FREM3P0C091 2139 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 PLXNA3P51805 1871 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 SDK2Q58EX2 2172 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 ZSWIM8A7E2V4 1837 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 A8MWP6 167 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 SOCS3O14543 225 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 LGALS9BQ3B8N2 356 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 LGALS9CQ6DKI2 356 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 IGFBPL1Q8WX77 278 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 IGHV1-24A0A0C4DH33 117 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 LOC105371267A0A1B0GV96 52 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 HOXD3P31249 432 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-216ENST00000556083 GFI1BQ5VTD9 330 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 AKAP6Q13023 2319 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 TRAV13-2A0A0B4J235 113 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 RPL35AP18077 110 aaKnown RBP8.6□□□□□ -1.03
ACTN1-216ENST00000556083 HS3ST6Q96QI5 342 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 PRR25Q96S07 402 aa8.6□□□□□ -1.03
ACTN1-216ENST00000556083 IGHV7-4-1A0A0J9YVY3 117 aa8.59□□□□□ -1.03
ACTN1-216ENST00000556083 CXCL1P09341 107 aa8.59□□□□□ -1.03
ACTN1-216ENST00000556083 C2orf66Q6UXQ4 117 aa8.59□□□□□ -1.03
ACTN1-216ENST00000556083 ZNF114Q8NC26 417 aa8.59□□□□□ -1.03
ACTN1-216ENST00000556083 FNDC4Q9H6D8 234 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-216ENST00000556083 ZMAT4Q9H898 229 aa8.59□□□□□ -1.03
ACTN1-216ENST00000556083 IGKV1-16P04430 117 aa8.59□□□□□ -1.03
ACTN1-216ENST00000556083 FHL1Q13642 323 aa8.59□□□□□ -1.03
ACTN1-216ENST00000556083 MEGF9Q9H1U4 602 aa8.59□□□□□ -1.03
ACTN1-216ENST00000556083 SIP14410 1827 aa8.59□□□□□ -1.03
ACTN1-216ENST00000556083 ARHGEF17Q96PE2 2063 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-216ENST00000556083 RNF223E7ERA6 249 aa8.59□□□□□ -1.03
ACTN1-216ENST00000556083 SIVA1O15304 175 aa8.59□□□□□ -1.03
ACTN1-216ENST00000556083 IGLV3-1P01715 115 aa8.59□□□□□ -1.03
ACTN1-216ENST00000556083 IL15RAQ13261 267 aa8.59□□□□□ -1.03
ACTN1-216ENST00000556083 RBMY1FQ15415 496 aaKnown RBP8.59□□□□□ -1.03
ACTN1-216ENST00000556083 NKAPP1Q8N9T2 125 aa8.59□□□□□ -1.03
ACTN1-216ENST00000556083 TSSC4Q9Y5U2 329 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-216ENST00000556083 NCR2O95944 276 aa8.59□□□□□ -1.04
ACTN1-216ENST00000556083 SRSF3P84103 164 aaKnown RBP8.59□□□□□ -1.04
ACTN1-216ENST00000556083 ANK1P16157 1881 aa8.58□□□□□ -1.04
ACTN1-216ENST00000556083 RPL32P62910 135 aaKnown RBP8.58□□□□□ -1.04
ACTN1-216ENST00000556083 C17orf58Q2M2W7 97 aa8.58□□□□□ -1.04
ACTN1-216ENST00000556083 C8orf86Q6ZUL3 223 aa8.58□□□□□ -1.04
ACTN1-216ENST00000556083 AZU1P20160 251 aa8.58□□□□□ -1.04
ACTN1-216ENST00000556083 TCTEX1D4Q5JR98 221 aa8.58□□□□□ -1.04
ACTN1-216ENST00000556083 THSD7BQ9C0I4 1608 aa8.58□□□□□ -1.04
ACTN1-216ENST00000556083 SPAG8Q99932 426 aaPredicted RBP8.58□□□□□ -1.04
ACTN1-216ENST00000556083 SNHG12Q9BXW3 62 aa8.58□□□□□ -1.04
ACTN1-216ENST00000556083 REG4Q9BYZ8 158 aa8.58□□□□□ -1.04
ACTN1-216ENST00000556083 VPREB3Q9UKI3 123 aa8.58□□□□□ -1.04
ACTN1-216ENST00000556083 SPTBN1Q01082 2364 aaKnown RBP8.58□□□□□ -1.04
ACTN1-216ENST00000556083 NDPQ00604 133 aa8.57□□□□□ -1.04
ACTN1-216ENST00000556083 Q8TAT8 98 aa8.57□□□□□ -1.04
ACTN1-216ENST00000556083 SLX1AQ9BQ83 275 aa8.57□□□□□ -1.04
ACTN1-216ENST00000556083 INS-IGF2F8WCM5 200 aa8.57□□□□□ -1.04
ACTN1-216ENST00000556083 C15orf65H3BRN8 121 aa8.57□□□□□ -1.04
ACTN1-216ENST00000556083 TFF1P04155 84 aa8.57□□□□□ -1.04
ACTN1-216ENST00000556083 ZNF134P52741 427 aa8.57□□□□□ -1.04
ACTN1-216ENST00000556083 Q6ZRM9 215 aa8.57□□□□□ -1.04
ACTN1-216ENST00000556083 TRAV13-1A0A0B4J241 112 aa8.57□□□□□ -1.04
ACTN1-216ENST00000556083 PAX9P55771 341 aa8.57□□□□□ -1.04
ACTN1-216ENST00000556083 HERV-K104P63124 156 aa8.57□□□□□ -1.04
ACTN1-216ENST00000556083 C1orf147Q96MC9 270 aaPredicted RBP8.57□□□□□ -1.04
ACTN1-216ENST00000556083 IGKV1-6A0A0C4DH72 117 aa8.57□□□□□ -1.04
ACTN1-216ENST00000556083 LY6G6EA0A0G2JKS1 128 aa8.57□□□□□ -1.04
ACTN1-216ENST00000556083 U3KQA8 63 aa8.57□□□□□ -1.04
ACTN1-216ENST00000556083 VWC2Q2TAL6 325 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 UBL5Q9BZL1 73 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 A0A087WV48 116 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 TRAV25A0A0B4J276 109 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 SDHAF1A6NFY7 115 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 STPG4Q8N801 248 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 C11orf44Q8N8P7 122 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 Q96MF0 132 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 F5H768 121 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 C9orf66Q5T8R8 295 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 UBE2E2Q96LR5 201 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 SMIM2Q9BVW6 85 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 TMEM126AQ9H061 195 aa8.56□□□□□ -1.04
ACTN1-216ENST00000556083 PROK2Q9HC23 129 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms