RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 DNLZQ5SXM8 178 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 TCF24Q7RTU0 167 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 GBGT1Q8N5D6 347 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 CYB561D1Q8N8Q1 229 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 GPR82Q96P67 336 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 RPS10P5Q9NQ39 176 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 PPP1R14DQ9NXH3 145 aa7.72□□□□□ -1.17
SRP54-208ENST00000555557 SCO2A0A1W2PP80 73 aa7.71□□□□□ -1.18
SRP54-208ENST00000555557 PF4P02776 101 aa7.71□□□□□ -1.18
SRP54-208ENST00000555557 RAB5AP20339 215 aa7.71□□□□□ -1.18
SRP54-208ENST00000555557 GNG5P63218 68 aa7.71□□□□□ -1.18
SRP54-208ENST00000555557 WFDC3Q8IUB2 231 aa7.71□□□□□ -1.18
SRP54-208ENST00000555557 SPATA3Q8NHX4 192 aa7.71□□□□□ -1.18
SRP54-208ENST00000555557 RPH3ALQ9UNE2 315 aa7.71□□□□□ -1.18
SRP54-208ENST00000555557 COL6A5A8TX70 2615 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 TRRAPQ9Y4A5 3859 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 A0A087X0K7 114 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 M0R3E3 92 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 S100A2P29034 98 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 LBHQ53QV2 105 aaPredicted RBP7.7□□□□□ -1.18
SRP54-208ENST00000555557 FAM90A2PQ658T7 463 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 RNF182Q8N6D2 247 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 TMEM158Q8WZ71 300 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 SLC35B3Q9H1N7 401 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 A0A1B0GV90 55 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 M0QZ24 198 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 SLC25A5P05141 298 aaKnown RBP7.7□□□□□ -1.18
SRP54-208ENST00000555557 HOXA5P20719 270 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 TAGLN2P37802 199 aaKnown RBP7.7□□□□□ -1.18
SRP54-208ENST00000555557 TFPI2P48307 235 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 PDE6HQ13956 83 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 C3orf56Q8N813 242 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 RPUSD4Q96CM3 377 aaKnown RBP7.7□□□□□ -1.18
SRP54-208ENST00000555557 C14orf144Q96I85 54 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 LINC00479Q96M42 142 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 DERL1Q9BUN8 251 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 SMDT1Q9H4I9 107 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 ZNF331Q9NQX6 463 aaPredicted RBP7.7□□□□□ -1.18
SRP54-208ENST00000555557 OTORQ9NRC9 128 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 ARL2-SNX15V9GYD0 113 aa7.7□□□□□ -1.18
SRP54-208ENST00000555557 TRAV8-2A0A0B4J237 113 aa7.69□□□□□ -1.18
SRP54-208ENST00000555557 HELTA6NFD8 242 aa7.69□□□□□ -1.18
SRP54-208ENST00000555557 ZNF705FA8MVS1 300 aaPredicted RBP7.69□□□□□ -1.18
SRP54-208ENST00000555557 BMI1P35226 326 aa7.69□□□□□ -1.18
SRP54-208ENST00000555557 ZNF674Q2M3X9 581 aa7.69□□□□□ -1.18
SRP54-208ENST00000555557 C12orf54Q6X4T0 127 aa7.69□□□□□ -1.18
SRP54-208ENST00000555557 C16orf92Q96LL3 132 aa7.69□□□□□ -1.18
SRP54-208ENST00000555557 SGK494Q96LW2 274 aa7.69□□□□□ -1.18
SRP54-208ENST00000555557 ZNF747Q9BV97 191 aa7.69□□□□□ -1.18
SRP54-208ENST00000555557 NRN1Q9NPD7 142 aa7.69□□□□□ -1.18
SRP54-208ENST00000555557 C7orf77A4D0Y5 90 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 PDE6DO43924 150 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 PSG9Q00887 426 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 DEFB114Q30KQ6 69 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 CD300EQ496F6 205 aaPredicted RBP7.68□□□□□ -1.18
SRP54-208ENST00000555557 LINC00482Q8N8I6 264 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 DYNLRB2Q8TF09 96 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 TXNDC17Q9BRA2 123 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 MS4A6AQ9H2W1 248 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 AAMDCQ9H7C9 122 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 EPDR1Q9UM22 224 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 TRAV34A0A0B4J273 112 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 SOCS3O14543 225 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 SAP30O75446 220 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 SOHLH1Q5JUK2 328 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 TMEM61Q8N0U2 210 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 LYPD1Q8N2G4 141 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 CMTM2Q8TAZ6 248 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 DCANP1Q8TF63 244 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 C20orf173Q96LM9 149 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 PARLQ9H300 379 aa7.68□□□□□ -1.18
SRP54-208ENST00000555557 IZUMO1RA6ND01 250 aa7.67□□□□□ -1.18
SRP54-208ENST00000555557 PRAC2D3DTV9 90 aa7.67□□□□□ -1.18
SRP54-208ENST00000555557 F6UZH7 168 aa7.67□□□□□ -1.18
SRP54-208ENST00000555557 TMEM250H0YL14 139 aa7.67□□□□□ -1.18
SRP54-208ENST00000555557 PEX7O00628 323 aa7.67□□□□□ -1.18
SRP54-208ENST00000555557 ZNF253O75346 499 aa7.67□□□□□ -1.18
SRP54-208ENST00000555557 DEFB1P60022 68 aa7.67□□□□□ -1.18
SRP54-208ENST00000555557 PKIAP61925 76 aa7.67□□□□□ -1.18
SRP54-208ENST00000555557 RHEBQ15382 184 aa7.67□□□□□ -1.18
SRP54-208ENST00000555557 RBPMS2Q6ZRY4 209 aaKnown RBP7.67□□□□□ -1.18
SRP54-208ENST00000555557 FAM24BQ8N5W8 94 aa7.67□□□□□ -1.18
SRP54-208ENST00000555557 C5orf17Q8NAS9 161 aa7.67□□□□□ -1.18
SRP54-208ENST00000555557 SLC50A1Q9BRV3 221 aa7.67□□□□□ -1.18
SRP54-208ENST00000555557 C2orf88Q9BSF0 95 aa7.67□□□□□ -1.18
SRP54-208ENST00000555557 TCRAP04437 139 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 PYY3Q5JQD4 70 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 LCN12Q6JVE5 192 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 GOLT1AQ6ZVE7 132 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 C11orf52Q96A22 123 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 ASCL2Q99929 193 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 STAB1Q9NY15 2570 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 TRAV8-1A0A0A6YYK1 113 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 PGPEP1LA6NFU8 196 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 ZNF727A8MUV8 499 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 DIRC3C9JPN6 131 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 TSTD3H0UI37 97 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 M0R036 132 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 AKR1C3P42330 323 aa7.66□□□□□ -1.18
SRP54-208ENST00000555557 PSG3Q16557 428 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms