RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 A8MTW9 85 aa8.76□□□□□ -1.01
SRP54-206ENST00000555317 HBE1P02100 147 aa8.76□□□□□ -1.01
SRP54-206ENST00000555317 TSPOP30536 169 aa8.76□□□□□ -1.01
SRP54-206ENST00000555317 UBE2L3P68036 154 aaKnown RBP8.76□□□□□ -1.01
SRP54-206ENST00000555317 AMTNQ6UX39 209 aa8.76□□□□□ -1.01
SRP54-206ENST00000555317 ZNF705AQ6ZN79 300 aaPredicted RBP8.76□□□□□ -1.01
SRP54-206ENST00000555317 HSD17B11Q8NBQ5 300 aa8.76□□□□□ -1.01
SRP54-206ENST00000555317 MRPL53Q96EL3 112 aaKnown RBP8.76□□□□□ -1.01
SRP54-206ENST00000555317 SAT2Q96F10 170 aaPredicted RBP8.76□□□□□ -1.01
SRP54-206ENST00000555317 NEU1Q99519 415 aa8.76□□□□□ -1.01
SRP54-206ENST00000555317 RFNGQ9Y644 331 aa8.76□□□□□ -1.01
SRP54-206ENST00000555317 OR10J4P0C629 311 aa8.75□□□□□ -1.01
SRP54-206ENST00000555317 NBEAP1P0C6P0 100 aa8.75□□□□□ -1.01
SRP54-206ENST00000555317 RBMY1A1P0DJD3 496 aaKnown RBP8.75□□□□□ -1.01
SRP54-206ENST00000555317 RBMY1CP0DJD4 496 aa8.75□□□□□ -1.01
SRP54-206ENST00000555317 PRB4P10163 310 aaPredicted RBP8.75□□□□□ -1.01
SRP54-206ENST00000555317 M6PRP20645 277 aa8.75□□□□□ -1.01
SRP54-206ENST00000555317 EMP1P54849 157 aa8.75□□□□□ -1.01
SRP54-206ENST00000555317 RBMY1FQ15415 496 aaKnown RBP8.75□□□□□ -1.01
SRP54-206ENST00000555317 RRN3P1Q2M238 152 aa8.75□□□□□ -1.01
SRP54-206ENST00000555317 Q5BKY6 102 aa8.75□□□□□ -1.01
SRP54-206ENST00000555317 CEMP1Q6PRD7 247 aaPredicted RBP8.75□□□□□ -1.01
SRP54-206ENST00000555317 BAP18Q8IXM2 172 aa8.75□□□□□ -1.01
SRP54-206ENST00000555317 PHLDA1Q8WV24 401 aaPredicted RBP8.75□□□□□ -1.01
SRP54-206ENST00000555317 RNF141Q8WVD5 230 aa8.75□□□□□ -1.01
SRP54-206ENST00000555317 LYSTQ99698 3801 aa8.75□□□□□ -1.01
SRP54-206ENST00000555317 TRAV12-2A0A075B6T6 113 aa8.74□□□□□ -1.01
SRP54-206ENST00000555317 TEX48A0A1B0GUV7 120 aa8.74□□□□□ -1.01
SRP54-206ENST00000555317 LEPP41159 167 aa8.74□□□□□ -1.01
SRP54-206ENST00000555317 CDKN1BP46527 198 aa8.74□□□□□ -1.01
SRP54-206ENST00000555317 CSN1S1P47710 185 aa8.74□□□□□ -1.01
SRP54-206ENST00000555317 TMEM256Q8N2U0 113 aa8.74□□□□□ -1.01
SRP54-206ENST00000555317 OR10G4Q8NGN3 311 aa8.74□□□□□ -1.01
SRP54-206ENST00000555317 OR10G9Q8NGN4 311 aa8.74□□□□□ -1.01
SRP54-206ENST00000555317 OR10G7Q8NGN6 311 aa8.74□□□□□ -1.01
SRP54-206ENST00000555317 FAM167A-AS1Q96KT0 104 aa8.74□□□□□ -1.01
SRP54-206ENST00000555317 PLA2G2EQ9NZK7 142 aa8.74□□□□□ -1.01
SRP54-206ENST00000555317 TNFSF18Q9UNG2 199 aa8.74□□□□□ -1.01
SRP54-206ENST00000555317 LOC102723971A0A1B0GUV8 181 aa8.73□□□□□ -1.01
SRP54-206ENST00000555317 C11orf94C9JXX5 98 aa8.73□□□□□ -1.01
SRP54-206ENST00000555317 PRAC2D3DTV9 90 aa8.73□□□□□ -1.01
SRP54-206ENST00000555317 ARPC5O15511 151 aa8.73□□□□□ -1.01
SRP54-206ENST00000555317 NDUFB4O95168 129 aa8.73□□□□□ -1.01
SRP54-206ENST00000555317 MBP02144 154 aa8.73□□□□□ -1.01
SRP54-206ENST00000555317 RAB2AP61019 212 aa8.73□□□□□ -1.01
SRP54-206ENST00000555317 ICAM4Q14773 271 aa8.73□□□□□ -1.01
SRP54-206ENST00000555317 FAM122CQ6P4D5 195 aa8.73□□□□□ -1.01
SRP54-206ENST00000555317 EXOC3-AS1Q8N2X6 119 aa8.73□□□□□ -1.01
SRP54-206ENST00000555317 FXYD5Q96DB9 178 aa8.73□□□□□ -1.01
SRP54-206ENST00000555317 GNPNAT1Q96EK6 184 aaPredicted RBP8.73□□□□□ -1.01
SRP54-206ENST00000555317 LINC01587Q99440 93 aa8.73□□□□□ -1.01
SRP54-206ENST00000555317 PSMG3Q9BT73 122 aaPredicted RBP8.73□□□□□ -1.01
SRP54-206ENST00000555317 LCE6AA0A183 80 aa8.72□□□□□ -1.01
SRP54-206ENST00000555317 RNF222A6NCQ9 220 aa8.72□□□□□ -1.01
SRP54-206ENST00000555317 NPIPB6E9PJ23 425 aa8.72□□□□□ -1.01
SRP54-206ENST00000555317 M0R3E3 92 aa8.72□□□□□ -1.01
SRP54-206ENST00000555317 SPART-AS1P0CW21 52 aa8.72□□□□□ -1.01
SRP54-206ENST00000555317 ATP6V0CP27449 155 aa8.72□□□□□ -1.01
SRP54-206ENST00000555317 CDC34P49427 236 aaPredicted RBP8.72□□□□□ -1.01
SRP54-206ENST00000555317 SERF2P84101 59 aa8.72□□□□□ -1.01
SRP54-206ENST00000555317 TMEM78Q5T7P6 136 aa8.72□□□□□ -1.01
SRP54-206ENST00000555317 PQLC2Q6ZP29 291 aa8.72□□□□□ -1.01
SRP54-206ENST00000555317 C1orf158Q8N1D5 194 aa8.72□□□□□ -1.01
SRP54-206ENST00000555317 RPP25LQ8N5L8 163 aaKnown RBP8.72□□□□□ -1.01
SRP54-206ENST00000555317 OR2G3Q8NGZ4 309 aa8.72□□□□□ -1.01
SRP54-206ENST00000555317 PHYHIPLQ96FC7 376 aa8.72□□□□□ -1.01
SRP54-206ENST00000555317 ODF3Q96PU9 254 aa8.72□□□□□ -1.01
SRP54-206ENST00000555317 TRAV10A0A0B4J240 114 aa8.71□□□□□ -1.02
SRP54-206ENST00000555317 J3KRW8 73 aa8.71□□□□□ -1.02
SRP54-206ENST00000555317 TAAR5O14804 337 aa8.71□□□□□ -1.02
SRP54-206ENST00000555317 CRXO43186 299 aaPredicted RBP8.71□□□□□ -1.02
SRP54-206ENST00000555317 HTN1P15515 57 aa8.71□□□□□ -1.02
SRP54-206ENST00000555317 RANP62826 216 aaKnown RBP8.71□□□□□ -1.02
SRP54-206ENST00000555317 FAM74A1Q5RGS3 127 aa8.71□□□□□ -1.02
SRP54-206ENST00000555317 LYPD1Q8N2G4 141 aa8.71□□□□□ -1.02
SRP54-206ENST00000555317 C2CD4CQ8TF44 421 aa8.71□□□□□ -1.02
SRP54-206ENST00000555317 CELA1Q9UNI1 258 aa8.71□□□□□ -1.02
SRP54-206ENST00000555317 ZNF705GA8MUZ8 300 aaPredicted RBP8.7□□□□□ -1.02
SRP54-206ENST00000555317 SMLR1H3BR10 107 aa8.7□□□□□ -1.02
SRP54-206ENST00000555317 RPL7L1Q6DKI1 246 aaKnown RBP8.7□□□□□ -1.02
SRP54-206ENST00000555317 Q6ZTC4 211 aa8.7□□□□□ -1.02
SRP54-206ENST00000555317 CMTM2Q8TAZ6 248 aa8.7□□□□□ -1.02
SRP54-206ENST00000555317 LINC00477Q96M19 166 aa8.7□□□□□ -1.02
SRP54-206ENST00000555317 C20orf144Q9BQM9 153 aa8.7□□□□□ -1.02
SRP54-206ENST00000555317 NIPSNAP3BQ9BS92 247 aa8.7□□□□□ -1.02
SRP54-206ENST00000555317 SH3BGRL3Q9H299 93 aa8.7□□□□□ -1.02
SRP54-206ENST00000555317 Q9H3A6 140 aa8.7□□□□□ -1.02
SRP54-206ENST00000555317 YTHDF2Q9Y5A9 579 aaKnown RBP8.7□□□□□ -1.02
SRP54-206ENST00000555317 DYNC2H1Q8NCM8 4307 aaKnown RBP8.69□□□□□ -1.02
SRP54-206ENST00000555317 IGKV2-40A0A087WW87 121 aaPredicted RBP8.69□□□□□ -1.02
SRP54-206ENST00000555317 H7BYZ3 331 aa8.69□□□□□ -1.02
SRP54-206ENST00000555317 HMGB3O15347 200 aaKnown RBP8.69□□□□□ -1.02
SRP54-206ENST00000555317 EIF3GO75821 320 aaKnown RBP eCLIP8.69□□□□□ -1.02
SRP54-206ENST00000555317 IGKV2D-40P01614 121 aaPredicted RBP8.69□□□□□ -1.02
SRP54-206ENST00000555317 ARL14EPLP0DKL9 152 aa8.69□□□□□ -1.02
SRP54-206ENST00000555317 CT45A10P0DMU9 189 aa8.69□□□□□ -1.02
SRP54-206ENST00000555317 TAS2R60P59551 318 aa8.69□□□□□ -1.02
SRP54-206ENST00000555317 ERCC8Q13216 396 aa8.69□□□□□ -1.02
SRP54-206ENST00000555317 FAM222AQ5U5X8 452 aa8.69□□□□□ -1.02
SRP54-206ENST00000555317 GFI1BQ5VTD9 330 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms