RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TRAV8-1A0A0A6YYK1 113 aa8.06□□□□□ -1.12
TDP1-211ENST00000555178 PARLQ9H300 379 aa8.06□□□□□ -1.12
TDP1-211ENST00000555178 TRBV20OR9-2A0A075B6H5 130 aa8.06□□□□□ -1.12
TDP1-211ENST00000555178 IGKV2-40A0A087WW87 121 aaPredicted RBP8.06□□□□□ -1.12
TDP1-211ENST00000555178 PGPEP1LA6NFU8 196 aa8.06□□□□□ -1.12
TDP1-211ENST00000555178 PEX7O00628 323 aa8.06□□□□□ -1.12
TDP1-211ENST00000555178 PDE6DO43924 150 aa8.06□□□□□ -1.12
TDP1-211ENST00000555178 IGKV2D-40P01614 121 aaPredicted RBP8.06□□□□□ -1.12
TDP1-211ENST00000555178 CD33P20138 364 aa8.06□□□□□ -1.12
TDP1-211ENST00000555178 C2CD4CQ8TF44 421 aa8.06□□□□□ -1.12
TDP1-211ENST00000555178 AAMDCQ9H7C9 122 aa8.06□□□□□ -1.12
TDP1-211ENST00000555178 EPDR1Q9UM22 224 aa8.06□□□□□ -1.12
TDP1-211ENST00000555178 F8W036 122 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 ZNF253O75346 499 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 IGLV1-51P01701 117 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 TCRAP04437 139 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 ZNF688P0C7X2 276 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 ZNF705DP0CH99 300 aaPredicted RBP8.05□□□□□ -1.12
TDP1-211ENST00000555178 ZNF705BP0CI00 300 aaPredicted RBP8.05□□□□□ -1.12
TDP1-211ENST00000555178 BMI1P35226 326 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 TAGLN2P37802 199 aaKnown RBP8.05□□□□□ -1.12
TDP1-211ENST00000555178 PSG9Q00887 426 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 ZNF124Q15973 351 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 GOLT1AQ6ZVE7 132 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 C5orf17Q8NAS9 161 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 C11orf52Q96A22 123 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 AURKAIP1Q9NWT8 199 aaPredicted RBP8.05□□□□□ -1.12
TDP1-211ENST00000555178 F6UB75 175 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 TMEM250H0YL14 139 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 RPL35P42766 123 aaKnown RBP8.05□□□□□ -1.12
TDP1-211ENST00000555178 GUCA2BQ16661 112 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 RBPMS2Q6ZRY4 209 aaKnown RBP8.05□□□□□ -1.12
TDP1-211ENST00000555178 CMTM2Q8TAZ6 248 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 SLC50A1Q9BRV3 221 aa8.05□□□□□ -1.12
TDP1-211ENST00000555178 DIRC3C9JPN6 131 aa8.04□□□□□ -1.12
TDP1-211ENST00000555178 F6UZH7 168 aa8.04□□□□□ -1.12
TDP1-211ENST00000555178 G3V4G9 280 aa8.04□□□□□ -1.12
TDP1-211ENST00000555178 K7EQG2 157 aa8.04□□□□□ -1.12
TDP1-211ENST00000555178 DNASE2O00115 360 aaPredicted RBP8.04□□□□□ -1.12
TDP1-211ENST00000555178 ISLRO14498 428 aa8.04□□□□□ -1.12
TDP1-211ENST00000555178 SOHLH1Q5JUK2 328 aa8.04□□□□□ -1.12
TDP1-211ENST00000555178 LCN12Q6JVE5 192 aa8.04□□□□□ -1.12
TDP1-211ENST00000555178 LYPD1Q8N2G4 141 aa8.04□□□□□ -1.12
TDP1-211ENST00000555178 TXNDC17Q9BRA2 123 aa8.04□□□□□ -1.12
TDP1-211ENST00000555178 NKX6-2Q9C056 277 aaPredicted RBP8.04□□□□□ -1.12
TDP1-211ENST00000555178 SMDT1Q9H4I9 107 aa8.04□□□□□ -1.12
TDP1-211ENST00000555178 NHLRC2Q8NBF2 726 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 VGLL1Q99990 258 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 SMIM7Q9BQ49 75 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 ATG101Q9BSB4 218 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 WFDC10AQ9H1F0 79 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 SIGLEC8Q9NYZ4 499 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 ZNF256Q9Y2P7 627 aaPredicted RBP8.03□□□□□ -1.12
TDP1-211ENST00000555178 ZNF727A8MUV8 499 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 TSPAN4O14817 238 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 IGLV2-11P01706 119 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 APOC3P02656 99 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 AKR1C3P42330 323 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 MEOX2P50222 304 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 KRTAP10-11P60412 298 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 ERCC8Q13216 396 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 PSG3Q16557 428 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 KRTAP21-3Q3LHN1 58 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 PSMG4Q5JS54 123 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 GDF5OSQ5U4N7 250 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 ZNF738Q8NE65 137 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 Q8TAT8 98 aa8.03□□□□□ -1.12
TDP1-211ENST00000555178 HIST1H2BAQ96A08 127 aa8.02□□□□□ -1.13
TDP1-211ENST00000555178 SEC11CQ9BY50 192 aa8.02□□□□□ -1.13
TDP1-211ENST00000555178 CD7P09564 240 aa8.02□□□□□ -1.13
TDP1-211ENST00000555178 CENPWQ5EE01 88 aa8.02□□□□□ -1.13
TDP1-211ENST00000555178 C10orf91Q5T1B1 145 aa8.02□□□□□ -1.13
TDP1-211ENST00000555178 IGF2BP2-AS1Q96M15 143 aa8.02□□□□□ -1.13
TDP1-211ENST00000555178 KRBOX1C9JBD0 128 aa8.01□□□□□ -1.13
TDP1-211ENST00000555178 PRNTQ86SH4 94 aa8.01□□□□□ -1.13
TDP1-211ENST00000555178 GPR61Q9BZJ8 451 aa8.01□□□□□ -1.13
TDP1-211ENST00000555178 PRB2P02812 416 aaPredicted RBP8.01□□□□□ -1.13
TDP1-211ENST00000555178 CSN1S1P47710 185 aa8.01□□□□□ -1.13
TDP1-211ENST00000555178 CNN1P51911 297 aaKnown RBP8.01□□□□□ -1.13
TDP1-211ENST00000555178 PAFAH1B2P68402 229 aa8.01□□□□□ -1.13
TDP1-211ENST00000555178 C9orf66Q5T8R8 295 aa8.01□□□□□ -1.13
TDP1-211ENST00000555178 ATRAIDQ6UW56 229 aa8.01□□□□□ -1.13
TDP1-211ENST00000555178 Q86TA4 180 aa8.01□□□□□ -1.13
TDP1-211ENST00000555178 CARHSP1Q9Y2V2 147 aaKnown RBP8.01□□□□□ -1.13
TDP1-211ENST00000555178 K7EN84 100 aa8□□□□□ -1.13
TDP1-211ENST00000555178 IGLV2-8P01709 118 aa8□□□□□ -1.13
TDP1-211ENST00000555178 DEFB131AP59861 70 aa8□□□□□ -1.13
TDP1-211ENST00000555178 UBE2G1P62253 170 aa8□□□□□ -1.13
TDP1-211ENST00000555178 TMEM183BQ1AE95 376 aa8□□□□□ -1.13
TDP1-211ENST00000555178 ODF3L2Q3SX64 289 aa8□□□□□ -1.13
TDP1-211ENST00000555178 PRR31Q5SQ13 230 aa8□□□□□ -1.13
TDP1-211ENST00000555178 APRG1Q8IVJ8 170 aa8□□□□□ -1.13
TDP1-211ENST00000555178 TVP23CQ96ET8 276 aa8□□□□□ -1.13
TDP1-211ENST00000555178 SPAG8Q99932 426 aaPredicted RBP8□□□□□ -1.13
TDP1-211ENST00000555178 TCEAL7Q9BRU2 100 aa8□□□□□ -1.13
TDP1-211ENST00000555178 KLF12Q9Y4X4 402 aa8□□□□□ -1.13
TDP1-211ENST00000555178 NBEAL2Q6ZNJ1 2754 aa8□□□□□ -1.13
TDP1-211ENST00000555178 ID1P41134 155 aa7.99□□□□□ -1.13
TDP1-211ENST00000555178 SNRPD3P62318 126 aaKnown RBP7.99□□□□□ -1.13
TDP1-211ENST00000555178 OCC1Q8TAD7 63 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms