RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 VPS25Q9BRG1 176 aa11.65□□□□□ -0.55
XRCC3-211ENST00000555055 SSBP4Q9BWG4 385 aaPredicted RBP11.65□□□□□ -0.55
XRCC3-211ENST00000555055 NBPF19A0A087WUL8 3843 aa11.64□□□□□ -0.55
XRCC3-211ENST00000555055 NDUFA3O95167 84 aa11.64□□□□□ -0.55
XRCC3-211ENST00000555055 IL4P05112 153 aa11.64□□□□□ -0.55
XRCC3-211ENST00000555055 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
XRCC3-211ENST00000555055 ARPC1AQ92747 370 aa11.64□□□□□ -0.55
XRCC3-211ENST00000555055 SLC25A39Q9BZJ4 359 aaPredicted RBP11.64□□□□□ -0.55
XRCC3-211ENST00000555055 EPDR1Q9UM22 224 aa11.64□□□□□ -0.55
XRCC3-211ENST00000555055 HIGD1AQ9Y241 93 aa11.64□□□□□ -0.55
XRCC3-211ENST00000555055 PTPN13Q12923 2485 aa11.64□□□□□ -0.55
XRCC3-211ENST00000555055 CAMPP49913 170 aa11.64□□□□□ -0.55
XRCC3-211ENST00000555055 BRD3OSQ6XYD6 125 aa11.64□□□□□ -0.55
XRCC3-211ENST00000555055 TMEM219Q86XT9 240 aa11.64□□□□□ -0.55
XRCC3-211ENST00000555055 FANCD2OSQ96PS1 177 aa11.64□□□□□ -0.55
XRCC3-211ENST00000555055 MAP1LC3CQ9BXW4 147 aa11.64□□□□□ -0.55
XRCC3-211ENST00000555055 HSPB8Q9UJY1 196 aa11.64□□□□□ -0.55
XRCC3-211ENST00000555055 CHTOPQ9Y3Y2 248 aaKnown RBP11.64□□□□□ -0.55
XRCC3-211ENST00000555055 C19orf71A6NCJ1 209 aa11.63□□□□□ -0.55
XRCC3-211ENST00000555055 ECSCRQ19T08 205 aa11.63□□□□□ -0.55
XRCC3-211ENST00000555055 CLEC2AQ6UVW9 174 aa11.63□□□□□ -0.55
XRCC3-211ENST00000555055 LINC00322Q6ZN03 302 aaPredicted RBP11.63□□□□□ -0.55
XRCC3-211ENST00000555055 NPBQ8NG41 125 aa11.63□□□□□ -0.55
XRCC3-211ENST00000555055 DPF1Q92782 380 aa11.63□□□□□ -0.55
XRCC3-211ENST00000555055 FMC1Q96HJ9 113 aa11.63□□□□□ -0.55
XRCC3-211ENST00000555055 AJUBAQ96IF1 538 aa11.63□□□□□ -0.55
XRCC3-211ENST00000555055 Q9H3A6 140 aa11.63□□□□□ -0.55
XRCC3-211ENST00000555055 PEF1Q9UBV8 284 aaKnown RBP11.63□□□□□ -0.55
XRCC3-211ENST00000555055 LINC00527Q9UJ94 153 aa11.63□□□□□ -0.55
XRCC3-211ENST00000555055 OR2T8A6NH00 312 aa11.63□□□□□ -0.55
XRCC3-211ENST00000555055 K7ERU9 68 aa11.63□□□□□ -0.55
XRCC3-211ENST00000555055 M0QZ24 198 aa11.62□□□□□ -0.55
XRCC3-211ENST00000555055 LINC01545Q5VT33 79 aa11.62□□□□□ -0.55
XRCC3-211ENST00000555055 RBPMS2Q6ZRY4 209 aaKnown RBP11.62□□□□□ -0.55
XRCC3-211ENST00000555055 CUBNO60494 3623 aa11.62□□□□□ -0.55
XRCC3-211ENST00000555055 LOC102724200A0A096LPH7 203 aaPredicted RBP11.62□□□□□ -0.55
XRCC3-211ENST00000555055 MUC21A0A0G2JKD1 596 aa11.62□□□□□ -0.55
XRCC3-211ENST00000555055 MUC21A0A140T8X8 626 aa11.62□□□□□ -0.55
XRCC3-211ENST00000555055 NPIPB6E9PJ23 425 aa11.62□□□□□ -0.55
XRCC3-211ENST00000555055 GNG7O60262 68 aa11.62□□□□□ -0.55
XRCC3-211ENST00000555055 LTAP01374 205 aa11.62□□□□□ -0.55
XRCC3-211ENST00000555055 FCGR2BP31994 310 aaPredicted RBP11.62□□□□□ -0.55
XRCC3-211ENST00000555055 SEC11AP67812 179 aa11.62□□□□□ -0.55
XRCC3-211ENST00000555055 MUC21Q5SSG8 566 aa11.62□□□□□ -0.55
XRCC3-211ENST00000555055 RNF5Q99942 180 aa11.62□□□□□ -0.55
XRCC3-211ENST00000555055 ANKRD17O75179 2603 aaKnown RBP11.61□□□□□ -0.55
XRCC3-211ENST00000555055 IGHV7-81A0A0B4J1V7 117 aa11.61□□□□□ -0.55
XRCC3-211ENST00000555055 TMUB1Q9BVT8 246 aa11.61□□□□□ -0.55
XRCC3-211ENST00000555055 IGHV4-61A0A0C4DH41 118 aa11.61□□□□□ -0.55
XRCC3-211ENST00000555055 hDV102S1A0JD36 115 aa11.61□□□□□ -0.55
XRCC3-211ENST00000555055 G3V318 75 aa11.61□□□□□ -0.55
XRCC3-211ENST00000555055 EGR2P11161 476 aaPredicted RBP11.61□□□□□ -0.55
XRCC3-211ENST00000555055 S100A7P31151 101 aa11.61□□□□□ -0.55
XRCC3-211ENST00000555055 ZNF562Q6V9R5 426 aa11.61□□□□□ -0.55
XRCC3-211ENST00000555055 GATD1Q8NB37 220 aa11.61□□□□□ -0.55
XRCC3-211ENST00000555055 F8W735 103 aaPredicted RBP11.6□□□□□ -0.55
XRCC3-211ENST00000555055 P01737 135 aa11.6□□□□□ -0.55
XRCC3-211ENST00000555055 ZNF491Q8N8L2 437 aa11.6□□□□□ -0.55
XRCC3-211ENST00000555055 Q8N9W7 124 aa11.6□□□□□ -0.55
XRCC3-211ENST00000555055 C5orf17Q8NAS9 161 aa11.6□□□□□ -0.55
XRCC3-211ENST00000555055 GTSF1Q8WW33 167 aa11.6□□□□□ -0.55
XRCC3-211ENST00000555055 RNF24Q9Y225 148 aa11.6□□□□□ -0.55
XRCC3-211ENST00000555055 HAX1O00165 279 aa11.6□□□□□ -0.55
XRCC3-211ENST00000555055 CIDEAO60543 219 aa11.6□□□□□ -0.55
XRCC3-211ENST00000555055 COX8AP10176 69 aa11.6□□□□□ -0.55
XRCC3-211ENST00000555055 PSG9Q00887 426 aa11.6□□□□□ -0.55
XRCC3-211ENST00000555055 IGFL4Q6B9Z1 124 aa11.6□□□□□ -0.55
XRCC3-211ENST00000555055 RNF125Q96EQ8 232 aa11.6□□□□□ -0.55
XRCC3-211ENST00000555055 CSTL1Q9H114 145 aa11.6□□□□□ -0.55
XRCC3-211ENST00000555055 ZNF469Q96JG9 3925 aaPredicted RBP11.59□□□□□ -0.55
XRCC3-211ENST00000555055 M0R3E3 92 aa11.59□□□□□ -0.55
XRCC3-211ENST00000555055 GPR183P32249 361 aa11.59□□□□□ -0.55
XRCC3-211ENST00000555055 AMMECR1LQ6DCA0 310 aa11.59□□□□□ -0.55
XRCC3-211ENST00000555055 CCDC144NLQ6NUI1 221 aa11.59□□□□□ -0.55
XRCC3-211ENST00000555055 C16orf54Q6UWD8 224 aa11.59□□□□□ -0.55
XRCC3-211ENST00000555055 GOLT1AQ6ZVE7 132 aa11.59□□□□□ -0.55
XRCC3-211ENST00000555055 TCF24Q7RTU0 167 aa11.59□□□□□ -0.55
XRCC3-211ENST00000555055 Q8N6K4 173 aa11.59□□□□□ -0.55
XRCC3-211ENST00000555055 SVIPQ8NHG7 77 aa11.59□□□□□ -0.55
XRCC3-211ENST00000555055 IGLV11-55A0A075B6I3 123 aa11.59□□□□□ -0.55
XRCC3-211ENST00000555055 IGHV3OR16-13A0A075B7E8 117 aa11.59□□□□□ -0.55
XRCC3-211ENST00000555055 IGHV3-74A0A0B4J1X5 117 aa11.59□□□□□ -0.55
XRCC3-211ENST00000555055 TRBV6-1A0A0K0K1D8 114 aa11.59□□□□□ -0.55
XRCC3-211ENST00000555055 FOXA3P55318 350 aaPredicted RBP11.59□□□□□ -0.55
XRCC3-211ENST00000555055 LINC00173Q6ZV60 143 aa11.59□□□□□ -0.55
XRCC3-211ENST00000555055 CIARTQ8N365 385 aaPredicted RBP11.59□□□□□ -0.55
XRCC3-211ENST00000555055 CENPVL3A0A0U1RRI6 287 aa11.58□□□□□ -0.56
XRCC3-211ENST00000555055 OVOL3O00110 214 aa11.58□□□□□ -0.56
XRCC3-211ENST00000555055 ATP6V0E1O15342 81 aa11.58□□□□□ -0.56
XRCC3-211ENST00000555055 CCL19Q99731 98 aa11.58□□□□□ -0.56
XRCC3-211ENST00000555055 GAGE12BA1L429 117 aa11.58□□□□□ -0.56
XRCC3-211ENST00000555055 TCRAP04437 139 aa11.58□□□□□ -0.56
XRCC3-211ENST00000555055 TRAV40A0A0B4J280 105 aa11.57□□□□□ -0.56
XRCC3-211ENST00000555055 IGHV3-66A0A0C4DH42 116 aa11.57□□□□□ -0.56
XRCC3-211ENST00000555055 TMEM238C9JI98 176 aa11.57□□□□□ -0.56
XRCC3-211ENST00000555055 CHEK1O14757 476 aa11.57□□□□□ -0.56
XRCC3-211ENST00000555055 APOHP02749 345 aaPredicted RBP11.57□□□□□ -0.56
XRCC3-211ENST00000555055 UBE2E1P51965 193 aa11.57□□□□□ -0.56
XRCC3-211ENST00000555055 C1orf122Q6ZSJ8 110 aa11.57□□□□□ -0.56
XRCC3-211ENST00000555055 PRNTQ86SH4 94 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms