RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 SLC25A48Q6ZT89 311 aaKnown RBP7.04□□□□□ -1.28
SYNE2-217ENST00000555022 UBALD2Q8IYN6 164 aa7.04□□□□□ -1.28
SYNE2-217ENST00000555022 GLMPQ8WWB7 406 aa7.04□□□□□ -1.28
SYNE2-217ENST00000555022 ABHD17AQ96GS6 310 aa7.04□□□□□ -1.28
SYNE2-217ENST00000555022 RASL11BQ9BPW5 248 aa7.04□□□□□ -1.28
SYNE2-217ENST00000555022 C20orf78Q9BR46 151 aa7.04□□□□□ -1.28
SYNE2-217ENST00000555022 A0A1B0GWB2 263 aa7.04□□□□□ -1.28
SYNE2-217ENST00000555022 GAGE12HA6NDE8 117 aa7.04□□□□□ -1.28
SYNE2-217ENST00000555022 NPIPB6E9PJ23 425 aa7.04□□□□□ -1.28
SYNE2-217ENST00000555022 FSTL3O95633 263 aa7.04□□□□□ -1.28
SYNE2-217ENST00000555022 TMEM200BQ69YZ2 307 aa7.04□□□□□ -1.28
SYNE2-217ENST00000555022 MDS2Q8NDY4 140 aa7.04□□□□□ -1.28
SYNE2-217ENST00000555022 PRSS22Q9GZN4 317 aa7.04□□□□□ -1.28
SYNE2-217ENST00000555022 TRAV40A0A0B4J280 105 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 LOC107984156A0A0G2JMH3 177 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 C16orf97H3BN30 126 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 EFNA4P52798 201 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 Q6ZQT7 251 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 ARL17AQ8IVW1 177 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 NDFIP1Q9BT67 221 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 RAI1Q7Z5J4 1906 aaPredicted RBP7.03□□□□□ -1.28
SYNE2-217ENST00000555022 HBDP02042 147 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 BMI1P35226 326 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 CKS1BP61024 79 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 ERCC8Q13216 396 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 HIST1H4GQ99525 98 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 LINC01548A6NM66 108 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 H3BVH4 76 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 K7EQM0 130 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 SH2D1AO60880 128 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 CGB3P0DN86 165 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 CGB7P0DN87 165 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 MYCNOSP40205 109 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 HES1Q14469 280 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 VMA21Q3ZAQ7 101 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 CCDC144NLQ6NUI1 221 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 BOD1L2Q8IYS8 172 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 ORMDL3Q8N138 153 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 MAPKAPK5-AS1Q8N8E1 139 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 TMEM178AQ8NBL3 297 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 OR4C13Q8NGP0 309 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 CACNG8Q8WXS5 425 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 AKAP13Q12802 2813 aa7.03□□□□□ -1.28
SYNE2-217ENST00000555022 PRRG2O14669 202 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 IGLV2-11P01706 119 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 NEGR1Q7Z3B1 354 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 ZNF479Q96JC4 524 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 CYSLTR1Q9Y271 337 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 C19orf67A6NJJ6 358 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 H7C2G1 150 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 FCN3O75636 299 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 LY6HO94772 140 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 GATA3P23771 443 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 SCGB2A2Q13296 93 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 SPAG8Q99932 426 aaPredicted RBP7.02□□□□□ -1.29
SYNE2-217ENST00000555022 HAX1O00165 279 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 DEFB109BQ30KR1 87 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 TMEM158Q8WZ71 300 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 CTSZQ9UBR2 303 aa7.02□□□□□ -1.29
SYNE2-217ENST00000555022 TMEM238LA0A1B0GVL6 79 aa7.01□□□□□ -1.29
SYNE2-217ENST00000555022 TMEM8BA6NDV4 472 aa7.01□□□□□ -1.29
SYNE2-217ENST00000555022 APOBEC3AP31941 199 aaPredicted RBP7.01□□□□□ -1.29
SYNE2-217ENST00000555022 ZNF474Q6S9Z5 364 aaPredicted RBP7.01□□□□□ -1.29
SYNE2-217ENST00000555022 RNF182Q8N6D2 247 aa7.01□□□□□ -1.29
SYNE2-217ENST00000555022 OSR1Q8TAX0 266 aaPredicted RBP7.01□□□□□ -1.29
SYNE2-217ENST00000555022 VGLL1Q99990 258 aa7.01□□□□□ -1.29
SYNE2-217ENST00000555022 SPG11Q96JI7 2443 aa7.01□□□□□ -1.29
SYNE2-217ENST00000555022 TRBV25-1A0A075B6N4 114 aa7.01□□□□□ -1.29
SYNE2-217ENST00000555022 APOMO95445 188 aa7.01□□□□□ -1.29
SYNE2-217ENST00000555022 ZNF80P51504 273 aaPredicted RBP7.01□□□□□ -1.29
SYNE2-217ENST00000555022 IGKV3-7A0A075B6H7 116 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 PRSS33Q8NF86 280 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 FER1L6-AS2Q96M78 137 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 ZNF71Q9NQZ8 489 aaPredicted RBP7□□□□□ -1.29
SYNE2-217ENST00000555022 MRPL35Q9NZE8 188 aaKnown RBP7□□□□□ -1.29
SYNE2-217ENST00000555022 SORL1Q92673 2214 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 EGR2P11161 476 aaPredicted RBP7□□□□□ -1.29
SYNE2-217ENST00000555022 C1orf122Q6ZSJ8 110 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 NGBQ9NPG2 151 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 OTORQ9NRC9 128 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 HIF1ANQ9NWT6 349 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 CHTOPQ9Y3Y2 248 aaKnown RBP7□□□□□ -1.29
SYNE2-217ENST00000555022 KLF12Q9Y4X4 402 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 SLC25A15Q9Y619 301 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 IGLV2-23P01705 113 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 FAM104BQ5XKR9 115 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 STXBP6Q8NFX7 210 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 C8orf46Q8TAG6 207 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 TMEM167AQ8TBQ9 72 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 ZNF492Q9P255 531 aa7□□□□□ -1.29
SYNE2-217ENST00000555022 C2CD3Q4AC94 2353 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.99□□□□□ -1.29
SYNE2-217ENST00000555022 PSMB2P49721 201 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 CRYBA4P53673 196 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 DEFB1P60022 68 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 TNFRSF14Q92956 283 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 ATP6V0BQ99437 205 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 SS18L2Q9UHA2 77 aa6.99□□□□□ -1.29
SYNE2-217ENST00000555022 ANKHD1Q8IWZ3 2542 aaKnown RBP6.99□□□□□ -1.29
SYNE2-217ENST00000555022 TRGV3P03979 118 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms