RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 GCHFRP30047 84 aa13.25□□□□□ -0.29
PCNX1-209ENST00000554879 CSN1S1P47710 185 aa13.24□□□□□ -0.29
PCNX1-209ENST00000554879 YPEL3P61236 119 aaPredicted RBP13.24□□□□□ -0.29
PCNX1-209ENST00000554879 C2orf83Q53S99 150 aa13.24□□□□□ -0.29
PCNX1-209ENST00000554879 ABCA2Q9BZC7 2435 aa13.24□□□□□ -0.29
PCNX1-209ENST00000554879 IGHV3OR16-13A0A075B7E8 117 aa13.24□□□□□ -0.29
PCNX1-209ENST00000554879 IGHV3-74A0A0B4J1X5 117 aa13.24□□□□□ -0.29
PCNX1-209ENST00000554879 C8orf88P0DMB2 117 aa13.24□□□□□ -0.29
PCNX1-209ENST00000554879 CACNG8Q8WXS5 425 aa13.24□□□□□ -0.29
PCNX1-209ENST00000554879 ZZEF1O43149 2961 aa13.24□□□□□ -0.29
PCNX1-209ENST00000554879 ATP5G2Q06055 141 aa13.24□□□□□ -0.29
PCNX1-209ENST00000554879 SH2D6Q7Z4S9 175 aa13.24□□□□□ -0.29
PCNX1-209ENST00000554879 IGKV3-7A0A075B6H7 116 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 IGHV4-61A0A0C4DH41 118 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 ATP5IP56385 69 aaPredicted RBP13.23□□□□□ -0.29
PCNX1-209ENST00000554879 LINC00305Q7Z4B0 112 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 HIGD1AQ9Y241 93 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 PRSS1P07477 247 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 CX3CL1P78423 397 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 PGLYRP4Q96LB8 373 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 NDUFA4L2Q9NRX3 87 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 PF4V1P10720 104 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 PPIFP30405 207 aaKnown RBP13.23□□□□□ -0.29
PCNX1-209ENST00000554879 OR4F17Q8NGA8 305 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 NPFFO15130 113 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 C5orf64Q2M2E5 130 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 PRSS57Q6UWY2 283 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 ZNF295-AS1Q8N0V1 137 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 UFC1Q9Y3C8 167 aa13.23□□□□□ -0.29
PCNX1-209ENST00000554879 TRAV5A0A0B4J249 113 aa13.22□□□□□ -0.29
PCNX1-209ENST00000554879 IL4P05112 153 aa13.22□□□□□ -0.29
PCNX1-209ENST00000554879 FCGR2BP31994 310 aaPredicted RBP13.22□□□□□ -0.29
PCNX1-209ENST00000554879 ZNF785A8K8V0 405 aa13.22□□□□□ -0.29
PCNX1-209ENST00000554879 K7EP34 96 aa13.22□□□□□ -0.29
PCNX1-209ENST00000554879 EBLN2Q6P2I7 272 aa13.22□□□□□ -0.29
PCNX1-209ENST00000554879 A0A1W2PRE2 83 aa13.22□□□□□ -0.29
PCNX1-209ENST00000554879 MFAP4P55083 255 aa13.22□□□□□ -0.29
PCNX1-209ENST00000554879 TANC2Q9HCD6 1990 aa13.21□□□□□ -0.29
PCNX1-209ENST00000554879 LCNL1Q6ZST4 164 aa13.21□□□□□ -0.29
PCNX1-209ENST00000554879 IGHV4-30-2A0A087WSY4 118 aa13.21□□□□□ -0.29
PCNX1-209ENST00000554879 C9orf118A6NHY6 69 aa13.21□□□□□ -0.29
PCNX1-209ENST00000554879 RNF223E7ERA6 249 aa13.21□□□□□ -0.29
PCNX1-209ENST00000554879 E7EUB6 86 aa13.21□□□□□ -0.29
PCNX1-209ENST00000554879 APOMO95445 188 aa13.21□□□□□ -0.29
PCNX1-209ENST00000554879 EIF4EBP1Q13541 118 aaPredicted RBP13.21□□□□□ -0.29
PCNX1-209ENST00000554879 VWC2Q2TAL6 325 aa13.21□□□□□ -0.29
PCNX1-209ENST00000554879 TEX29Q8N6K0 151 aa13.21□□□□□ -0.29
PCNX1-209ENST00000554879 Q8N7P7 452 aa13.21□□□□□ -0.3
PCNX1-209ENST00000554879 C11orf1Q9H5F2 150 aa13.21□□□□□ -0.3
PCNX1-209ENST00000554879 SOX21Q9Y651 276 aaPredicted RBP13.21□□□□□ -0.3
PCNX1-209ENST00000554879 IGHV3-49A0A0A0MS15 119 aa13.21□□□□□ -0.3
PCNX1-209ENST00000554879 SYS1-DBNDD2H3BUS1 97 aa13.21□□□□□ -0.3
PCNX1-209ENST00000554879 TP53TG3Q9ULZ0 132 aa13.21□□□□□ -0.3
PCNX1-209ENST00000554879 IGLV1-47P01700 117 aa13.2□□□□□ -0.3
PCNX1-209ENST00000554879 PYYP10082 97 aa13.2□□□□□ -0.3
PCNX1-209ENST00000554879 POU2AF1Q16633 256 aa13.2□□□□□ -0.3
PCNX1-209ENST00000554879 C18orf32Q8TCD1 76 aa13.2□□□□□ -0.3
PCNX1-209ENST00000554879 NPPCP23582 126 aa13.2□□□□□ -0.3
PCNX1-209ENST00000554879 MINOS1Q5TGZ0 78 aa13.2□□□□□ -0.3
PCNX1-209ENST00000554879 C11orf71Q6IPW1 123 aa13.2□□□□□ -0.3
PCNX1-209ENST00000554879 AMTNQ6UX39 209 aa13.2□□□□□ -0.3
PCNX1-209ENST00000554879 CYSLTR1Q9Y271 337 aa13.2□□□□□ -0.3
PCNX1-209ENST00000554879 MINOS1-NBL1R4GNA1 71 aa13.2□□□□□ -0.3
PCNX1-209ENST00000554879 P0C879 139 aa13.19□□□□□ -0.3
PCNX1-209ENST00000554879 RHOGP84095 191 aa13.19□□□□□ -0.3
PCNX1-209ENST00000554879 PGPA6NDG6 321 aa13.19□□□□□ -0.3
PCNX1-209ENST00000554879 B4DSR2 109 aa13.19□□□□□ -0.3
PCNX1-209ENST00000554879 NPFFR1Q9GZQ6 430 aa13.19□□□□□ -0.3
PCNX1-209ENST00000554879 H3BUX3 64 aa13.19□□□□□ -0.3
PCNX1-209ENST00000554879 FXYD7P58549 80 aa13.19□□□□□ -0.3
PCNX1-209ENST00000554879 C21orf62Q9NYP8 219 aa13.19□□□□□ -0.3
PCNX1-209ENST00000554879 PRRC2AP48634 2157 aaKnown RBP13.18□□□□□ -0.3
PCNX1-209ENST00000554879 CTRLP40313 264 aa13.18□□□□□ -0.3
PCNX1-209ENST00000554879 UBE2E1P51965 193 aa13.18□□□□□ -0.3
PCNX1-209ENST00000554879 DLX6P56179 175 aa13.18□□□□□ -0.3
PCNX1-209ENST00000554879 ZNF843Q8N446 348 aa13.18□□□□□ -0.3
PCNX1-209ENST00000554879 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.18□□□□□ -0.3
PCNX1-209ENST00000554879 C18orf15Q96N68 181 aa13.18□□□□□ -0.3
PCNX1-209ENST00000554879 BBC3Q96PG8 261 aaPredicted RBP13.18□□□□□ -0.3
PCNX1-209ENST00000554879 DUX5Q96PT3 197 aa13.18□□□□□ -0.3
PCNX1-209ENST00000554879 LINC00574Q9H8X3 128 aa13.18□□□□□ -0.3
PCNX1-209ENST00000554879 TCRBV4S1A1TA0A5B7 111 aa13.18□□□□□ -0.3
PCNX1-209ENST00000554879 MSMBP08118 114 aa13.18□□□□□ -0.3
PCNX1-209ENST00000554879 FAM120AOSQ5T036 256 aa13.18□□□□□ -0.3
PCNX1-209ENST00000554879 FCN3O75636 299 aa13.17□□□□□ -0.3
PCNX1-209ENST00000554879 RPS20P60866 119 aaKnown RBP13.17□□□□□ -0.3
PCNX1-209ENST00000554879 IGHV3-66A0A0C4DH42 116 aa13.17□□□□□ -0.3
PCNX1-209ENST00000554879 GAGE13Q4V321 117 aa13.17□□□□□ -0.3
PCNX1-209ENST00000554879 LINC00173Q6ZV60 143 aa13.17□□□□□ -0.3
PCNX1-209ENST00000554879 TCF24Q7RTU0 167 aa13.17□□□□□ -0.3
PCNX1-209ENST00000554879 AAMDCQ9H7C9 122 aa13.17□□□□□ -0.3
PCNX1-209ENST00000554879 HIGD1CA8MV81 97 aa13.17□□□□□ -0.3
PCNX1-209ENST00000554879 HOXB4P17483 251 aaPredicted RBP13.17□□□□□ -0.3
PCNX1-209ENST00000554879 MRPL16Q9NX20 251 aaKnown RBP13.17□□□□□ -0.3
PCNX1-209ENST00000554879 SYT8Q8NBV8 401 aa13.16□□□□□ -0.3
PCNX1-209ENST00000554879 USP24Q9UPU5 2620 aa13.16□□□□□ -0.3
PCNX1-209ENST00000554879 IGHV3-11P01762 117 aa13.16□□□□□ -0.3
PCNX1-209ENST00000554879 SHISA2Q6UWI4 295 aa13.16□□□□□ -0.3
PCNX1-209ENST00000554879 BCL6BQ8N143 479 aaPredicted RBP13.16□□□□□ -0.3
PCNX1-209ENST00000554879 AP5S1Q9NUS5 200 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms