RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-230ENST00000554673 TMEM190Q8WZ59 177 aa4.39□□□□□ -1.71
ATXN3-230ENST00000554673 GRAMD2BQ96HH9 432 aa4.39□□□□□ -1.71
ATXN3-230ENST00000554673 ATG101Q9BSB4 218 aa4.39□□□□□ -1.71
ATXN3-230ENST00000554673 ACTR3CQ9C0K3 210 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-230ENST00000554673 NACAE9PAV3 2078 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 TRAV8-1A0A0A6YYK1 113 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 IZUMO1RA6ND01 250 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 FAM223BA6NKX1 122 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 ZNF705FA8MVS1 300 aaPredicted RBP4.38□□□□□ -1.71
ATXN3-230ENST00000554673 H3BUA1 57 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 M0QZK8 103 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 CORTO00230 105 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 GNG7O60262 68 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 HYPMO75409 117 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 CRYBB3P26998 211 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 SUB1P53999 127 aaKnown RBP eCLIP4.38□□□□□ -1.71
ATXN3-230ENST00000554673 RHOBP62745 196 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 ATP5G2Q06055 141 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 GAGE2BQ13066 116 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 FOXE3Q13461 319 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 GAGE2EQ4V326 116 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 KHDC3LQ587J8 217 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 GAGE2AQ6NT46 116 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 UQCC3Q6UW78 93 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 CBLN2Q8IUK8 224 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 FAM223AQ8IWN6 122 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 KLHDC1Q8N7A1 406 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 LRRC20Q8TCA0 184 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 SGK494Q96LW2 274 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 C20orf24Q9BUV8 137 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 PBDC1Q9BVG4 233 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 MRPL32Q9BYC8 188 aaKnown RBP4.38□□□□□ -1.71
ATXN3-230ENST00000554673 PRSS22Q9GZN4 317 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 PARLQ9H300 379 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 TMEM14CQ9P0S9 112 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 GAGE2DQ9UEU5 116 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 MUC4Q99102 2169 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 NOTCH3Q9UM47 2321 aa4.38□□□□□ -1.71
ATXN3-230ENST00000554673 DNAH3Q8TD57 4116 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 TRBV19A0A075B6N1 114 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 C17orf112F2Z3M2 114 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 RHODO00212 210 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 ISLRO14498 428 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 CYB5BO43169 146 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 COX7A2P2O60397 106 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 NDUFA7O95182 113 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 CXorf1O96002 111 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 LGALS1P09382 135 aaKnown RBP4.37□□□□□ -1.71
ATXN3-230ENST00000554673 HIST1H1BP16401 226 aaKnown RBP4.37□□□□□ -1.71
ATXN3-230ENST00000554673 SRP14P37108 136 aaKnown RBP4.37□□□□□ -1.71
ATXN3-230ENST00000554673 CDX1P47902 265 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-230ENST00000554673 CRIP1P50238 77 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 RAB14P61106 215 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 SELENOTP62341 195 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 RPL23P62829 140 aaKnown RBP4.37□□□□□ -1.71
ATXN3-230ENST00000554673 MEF2BQ02080 365 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-230ENST00000554673 UBE2V1Q13404 147 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 KLF5Q13887 457 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-230ENST00000554673 KRTAP24-1Q3LI83 254 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 PRR9Q5T870 116 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 EIF5AL1Q6IS14 154 aaKnown RBP4.37□□□□□ -1.71
ATXN3-230ENST00000554673 COMMD1Q8N668 190 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 RNF182Q8N6D2 247 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 ZNF709Q8N972 641 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 DLX4Q92988 240 aaPredicted RBP4.37□□□□□ -1.71
ATXN3-230ENST00000554673 EEF1AKMT3Q96AZ1 226 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 TMEM18Q96B42 140 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 PAXXQ9BUH6 204 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 SEC11CQ9BY50 192 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 GPR61Q9BZJ8 451 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 OR51M1Q9H341 326 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 SDF2L1Q9HCN8 221 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 TREM1Q9NP99 234 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 MLXQ9UH92 298 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 VAX2Q9UIW0 290 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 PITPNC1Q9UKF7 332 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 HIGD1AQ9Y241 93 aa4.37□□□□□ -1.71
ATXN3-230ENST00000554673 JMJD1CQ15652 2540 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 MAST4O15021 2626 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 IGKV2-40A0A087WW87 121 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-230ENST00000554673 A0A087X0K7 114 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 TRBV7-1A0A0A6YYK4 115 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 TMEM89A2RUT3 159 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 RBMY1BA6NDE4 496 aaKnown RBP4.36□□□□□ -1.71
ATXN3-230ENST00000554673 BTBD17A6NE02 478 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 RBMY1EA6NEQ0 496 aaKnown RBP4.36□□□□□ -1.71
ATXN3-230ENST00000554673 C11orf94C9JXX5 98 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 CHEK1O14757 476 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 PHOX2AO14813 284 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 NUPL2O15504 423 aaKnown RBP4.36□□□□□ -1.71
ATXN3-230ENST00000554673 OR7C2O60412 319 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 IGKV2D-40P01614 121 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-230ENST00000554673 MBP02144 154 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 NBEAP1P0C6P0 100 aa4.36□□□□□ -1.71
ATXN3-230ENST00000554673 RBMY1DP0C7P1 496 aaKnown RBP4.36□□□□□ -1.71
ATXN3-230ENST00000554673 HOXD3P31249 432 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-230ENST00000554673 ZNF80P51504 273 aaPredicted RBP4.36□□□□□ -1.71
ATXN3-230ENST00000554673 UBE2L3P68036 154 aaKnown RBP4.36□□□□□ -1.71
ATXN3-230ENST00000554673 OR5I1Q13606 314 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms