RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 DNAJC15Q9Y5T4 150 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 NISCHQ9Y2I1 1504 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 OBSL1O75147 1896 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 ANKRD31Q8N7Z5 1873 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 THADAQ6YHU6 1953 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 ADGRL1O94910 1474 aa2.45□□□□□ -2.02
SCFD1-211ENST00000554437 KDM5CP41229 1560 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 N4BP2Q86UW6 1770 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-211ENST00000554437 ZNF407Q9C0G0 2248 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 IGKV1D-42A0A075B6H8 117 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 ODF3BA8MYP8 253 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 PYYP10082 97 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 SLC25A4P12235 298 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 PEBP1P30086 187 aaKnown RBP2.44□□□□□ -2.02
SCFD1-211ENST00000554437 ZNF93P35789 620 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-211ENST00000554437 HINT1P49773 126 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-211ENST00000554437 PCBD1P61457 104 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 ERHP84090 104 aaKnown RBP2.44□□□□□ -2.02
SCFD1-211ENST00000554437 ZNF345Q14585 488 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 SS18Q15532 418 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 CCSMST1Q4G0I0 132 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 DEFB134Q4QY38 66 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 CLLU1Q5K131 121 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 ATOH7Q8N100 152 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 LINC00301Q8NCQ3 95 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 OR8B3Q8NGG8 313 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 CCL4L1Q8NHW4 92 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 PP6455Q8WZ26 134 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 CIB3Q96Q77 187 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-211ENST00000554437 CXCL16Q9H2A7 254 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 CST9LQ9H4G1 147 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 C14orf132Q9NPU4 83 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 NDUFB11Q9NX14 153 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 SHANK3Q9BYB0 1731 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 BCL9LQ86UU0 1499 aa2.44□□□□□ -2.02
SCFD1-211ENST00000554437 MYOM3Q5VTT5 1437 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 KDM5BQ9UGL1 1544 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 MYH7BA7E2Y1 1941 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 TRBV20-1A0A075B6N2 111 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 IGKV2-24A0A0C4DH68 120 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 A0A1W2PNM2 257 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 M0R233 179 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 ZNF737O75373 536 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 SNAPC5O75971 98 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 PROSCO94903 275 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 RBP4P02753 201 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 BAALC-AS2P0C853 105 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 GNG4P50150 75 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 PPP3R1P63098 170 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 ZNF791Q3KP31 576 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-211ENST00000554437 ZNF826PQ6ZT77 177 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 C3orf62Q6ZUJ4 267 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 OR2T35Q8NGX2 323 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 CMTM2Q8TAZ6 248 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 CLEC2BQ92478 149 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 HYLS1Q96M11 299 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 SLC35B3Q9H1N7 401 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 RERGLQ9H628 205 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 COL1A1P02452 1464 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-211ENST00000554437 MBD5Q9P267 1494 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 FRMPD1Q5SYB0 1578 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 NYNRINQ9P2P1 1898 aaKnown RBP2.43□□□□□ -2.02
SCFD1-211ENST00000554437 SHANK1Q9Y566 2161 aa2.43□□□□□ -2.02
SCFD1-211ENST00000554437 RGS12O14924 1447 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 ERBINQ96RT1 1412 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 WDR90Q96KV7 1748 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 NUP98P52948 1817 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 TMSB15BA0A087X1C1 80 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 TRAV1-1A0A0B4J248 108 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 hDV103S1A0JD37 113 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 M0R129 80 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 YPEL1O60688 119 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 IGLV1-51P01701 117 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 CD14P08571 375 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 CCL4P13236 92 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 ROMO1P60602 79 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 OR5AS1Q8N127 324 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 C10orf111Q8N326 155 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 KCNRGQ8N5I3 272 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 Q8N814 137 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 OR4X2Q8NGF9 303 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 C20orf166-AS1Q96NR2 134 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 SAR1AQ9NR31 198 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 METTL1Q9UBP6 276 aaKnown RBP2.42□□□□□ -2.02
SCFD1-211ENST00000554437 BOKQ9UMX3 212 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-211ENST00000554437 LSM2Q9Y333 95 aaKnown RBP2.42□□□□□ -2.02
SCFD1-211ENST00000554437 MPC1Q9Y5U8 109 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 LCTP09848 1927 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 PHLPP1O60346 1717 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 VPS8Q8N3P4 1428 aa2.42□□□□□ -2.02
SCFD1-211ENST00000554437 IGKV2D-26A0A0A0MRZ7 120 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 MUC21A0A0G2JKD1 596 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 MUC21A0A140T8X8 626 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 PNMA8CA0A1B0GUJ8 204 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 SPAARA0A1B0GVQ0 90 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 TRACP01848 142 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 CRPP02741 224 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 CD3DP04234 171 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 CKS2P33552 79 aa2.41□□□□□ -2.02
SCFD1-211ENST00000554437 CIRBPQ14011 172 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms