RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 SH3BGRL3Q9H299 93 aa8.62□□□□□ -1.03
TMEM253-202ENST00000553744 X6R8D5 127 aa8.62□□□□□ -1.03
TMEM253-202ENST00000553744 TENM2Q9NT68 2774 aa8.61□□□□□ -1.03
TMEM253-202ENST00000553744 A0A1W2PPV4 95 aa8.61□□□□□ -1.03
TMEM253-202ENST00000553744 HMSDA8MTL9 139 aa8.61□□□□□ -1.03
TMEM253-202ENST00000553744 PRAC2D3DTV9 90 aa8.61□□□□□ -1.03
TMEM253-202ENST00000553744 BOLA2-SMG1P6H3BVE0 249 aa8.61□□□□□ -1.03
TMEM253-202ENST00000553744 EIF3GO75821 320 aaKnown RBP eCLIP8.61□□□□□ -1.03
TMEM253-202ENST00000553744 JTBO76095 146 aa8.61□□□□□ -1.03
TMEM253-202ENST00000553744 AMBPP02760 352 aa8.61□□□□□ -1.03
TMEM253-202ENST00000553744 MIFP14174 115 aa8.61□□□□□ -1.03
TMEM253-202ENST00000553744 UBE2L3P68036 154 aaKnown RBP8.61□□□□□ -1.03
TMEM253-202ENST00000553744 FAM122CQ6P4D5 195 aa8.61□□□□□ -1.03
TMEM253-202ENST00000553744 ZNF705AQ6ZN79 300 aaPredicted RBP8.61□□□□□ -1.03
TMEM253-202ENST00000553744 IL17DQ8TAD2 202 aa8.61□□□□□ -1.03
TMEM253-202ENST00000553744 AAMDCQ9H7C9 122 aa8.61□□□□□ -1.03
TMEM253-202ENST00000553744 PRELID1Q9Y255 219 aa8.61□□□□□ -1.03
TMEM253-202ENST00000553744 CSMD3Q7Z407 3707 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 RYR2Q92736 4967 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 IGHV4-28A0A0C4DH34 117 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 M0R2Z0 102 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 M0R3E3 92 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 MBP02144 154 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 CDC34P49427 236 aaPredicted RBP8.6□□□□□ -1.03
TMEM253-202ENST00000553744 SPINK13Q1W4C9 94 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 CASC10Q5T4H9 136 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 PQLC2Q6ZP29 291 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 EXOC3-AS1Q8N2X6 119 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 KCNRGQ8N5I3 272 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 RPP25LQ8N5L8 163 aaKnown RBP8.6□□□□□ -1.03
TMEM253-202ENST00000553744 OR10J6PQ8NGY7 276 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 PHYHIPLQ96FC7 376 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 ST6GAL2Q96JF0 529 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 IGF2BP2-AS1Q96M15 143 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 CYTL1Q9NRR1 136 aa8.6□□□□□ -1.03
TMEM253-202ENST00000553744 DEFB4AO15263 64 aa8.59□□□□□ -1.03
TMEM253-202ENST00000553744 CRXO43186 299 aaPredicted RBP8.59□□□□□ -1.03
TMEM253-202ENST00000553744 INSP01308 110 aa8.59□□□□□ -1.03
TMEM253-202ENST00000553744 ICAM4Q14773 271 aa8.59□□□□□ -1.03
TMEM253-202ENST00000553744 ZFAND6Q6FIF0 208 aa8.59□□□□□ -1.03
TMEM253-202ENST00000553744 BAP18Q8IXM2 172 aa8.59□□□□□ -1.03
TMEM253-202ENST00000553744 TCTE3Q8IZS6 198 aa8.59□□□□□ -1.03
TMEM253-202ENST00000553744 NEU1Q99519 415 aa8.59□□□□□ -1.03
TMEM253-202ENST00000553744 ARPC5LQ9BPX5 153 aa8.59□□□□□ -1.03
TMEM253-202ENST00000553744 PPP1R14DQ9NXH3 145 aa8.59□□□□□ -1.03
TMEM253-202ENST00000553744 GOLT1BQ9Y3E0 138 aa8.59□□□□□ -1.03
TMEM253-202ENST00000553744 STARD9Q9P2P6 4700 aa8.59□□□□□ -1.03
TMEM253-202ENST00000553744 IGHV3OR16-12A0A075B7B8 117 aa8.58□□□□□ -1.04
TMEM253-202ENST00000553744 A0A0D9SG52 128 aa8.58□□□□□ -1.04
TMEM253-202ENST00000553744 NPIPB6E9PJ23 425 aa8.58□□□□□ -1.04
TMEM253-202ENST00000553744 HMGB3O15347 200 aaKnown RBP8.58□□□□□ -1.04
TMEM253-202ENST00000553744 STAG3L2P0CL84 134 aa8.58□□□□□ -1.04
TMEM253-202ENST00000553744 STAG3L3P0CL85 134 aa8.58□□□□□ -1.04
TMEM253-202ENST00000553744 RBMY1A1P0DJD3 496 aaKnown RBP8.58□□□□□ -1.04
TMEM253-202ENST00000553744 RBMY1CP0DJD4 496 aa8.58□□□□□ -1.04
TMEM253-202ENST00000553744 RBMY1FQ15415 496 aaKnown RBP8.58□□□□□ -1.04
TMEM253-202ENST00000553744 C1orf158Q8N1D5 194 aa8.58□□□□□ -1.04
TMEM253-202ENST00000553744 LYPD1Q8N2G4 141 aa8.58□□□□□ -1.04
TMEM253-202ENST00000553744 KRTAP17-1Q9BYP8 105 aa8.58□□□□□ -1.04
TMEM253-202ENST00000553744 Q9H3A6 140 aa8.58□□□□□ -1.04
TMEM253-202ENST00000553744 TRAV12-2A0A075B6T6 113 aa8.57□□□□□ -1.04
TMEM253-202ENST00000553744 SMIM9A6NGZ8 99 aa8.57□□□□□ -1.04
TMEM253-202ENST00000553744 BCL2L11O43521 198 aa8.57□□□□□ -1.04
TMEM253-202ENST00000553744 ARL14EPLP0DKL9 152 aa8.57□□□□□ -1.04
TMEM253-202ENST00000553744 CDKN1BP46527 198 aa8.57□□□□□ -1.04
TMEM253-202ENST00000553744 RANP62826 216 aaKnown RBP8.57□□□□□ -1.04
TMEM253-202ENST00000553744 RAB24Q969Q5 203 aa8.57□□□□□ -1.04
TMEM253-202ENST00000553744 ODF3Q96PU9 254 aa8.57□□□□□ -1.04
TMEM253-202ENST00000553744 ACTR3CQ9C0K3 210 aaPredicted RBP8.57□□□□□ -1.04
TMEM253-202ENST00000553744 DYNC2H1Q8NCM8 4307 aaKnown RBP8.57□□□□□ -1.04
TMEM253-202ENST00000553744 hCG_2014768A0A024R1R8 64 aa8.56□□□□□ -1.04
TMEM253-202ENST00000553744 IGKV2-40A0A087WW87 121 aaPredicted RBP8.56□□□□□ -1.04
TMEM253-202ENST00000553744 KANTRA0A1W2PQU2 76 aa8.56□□□□□ -1.04
TMEM253-202ENST00000553744 IGKV2D-40P01614 121 aaPredicted RBP8.56□□□□□ -1.04
TMEM253-202ENST00000553744 CT45A10P0DMU9 189 aa8.56□□□□□ -1.04
TMEM253-202ENST00000553744 TSPOP30536 169 aa8.56□□□□□ -1.04
TMEM253-202ENST00000553744 ERCC8Q13216 396 aa8.56□□□□□ -1.04
TMEM253-202ENST00000553744 PMS2P11Q13670 270 aa8.56□□□□□ -1.04
TMEM253-202ENST00000553744 SSX7Q7RTT5 188 aa8.56□□□□□ -1.04
TMEM253-202ENST00000553744 TMEM208Q9BTX3 173 aa8.56□□□□□ -1.04
TMEM253-202ENST00000553744 CTXND1A0A1B0GTU2 59 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 CXorf65A6NEN9 183 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 CXorf1O96002 111 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 HBE1P02100 147 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 GCHFRP30047 84 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 LEPP41159 167 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 CSN1S1P47710 185 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 ZNF726P1Q15940 193 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 AKR1C8PQ5T2L2 129 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 C9orf47Q6ZRZ4 202 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 AKAP14Q86UN6 197 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 C11orf45Q8TAV5 145 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 SUN5Q8TC36 379 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 LINC00477Q96M19 166 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 ZNF471Q9BX82 626 aaPredicted RBP8.55□□□□□ -1.04
TMEM253-202ENST00000553744 AGPAT4-IT1Q9H0P7 198 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 OTORQ9NRC9 128 aa8.55□□□□□ -1.04
TMEM253-202ENST00000553744 TMEM189A5PLL7 270 aa8.54□□□□□ -1.04
TMEM253-202ENST00000553744 PFDN1O60925 122 aa8.54□□□□□ -1.04
TMEM253-202ENST00000553744 C1QBP02746 253 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms