RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 ELANEP08246 267 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 CT45A10P0DMU9 189 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 FOXA3P55318 350 aaPredicted RBP5.63□□□□□ -1.51
ATXN3-221ENST00000553498 NDUFA6P56556 154 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 KRTAP10-9P60411 292 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 BLCAPP62952 87 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 SRSF2Q01130 221 aaKnown RBP5.63□□□□□ -1.51
ATXN3-221ENST00000553498 C16orf54Q6UWD8 224 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 EXOC3-AS1Q8N2X6 119 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 FOXC2Q99958 501 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 NDFIP1Q9BT67 221 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 PPP1R14DQ9NXH3 145 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 PSG8Q9UQ74 426 aa5.63□□□□□ -1.51
ATXN3-221ENST00000553498 COL12A1Q99715 3063 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 SH2D7A6NKC9 451 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-221ENST00000553498 IGHV4-59P01825 116 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 PF4V1P10720 104 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 PSMB8P28062 276 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 RPS20P60866 119 aaKnown RBP5.62□□□□□ -1.51
ATXN3-221ENST00000553498 RPL11P62913 178 aaKnown RBP5.62□□□□□ -1.51
ATXN3-221ENST00000553498 FOXE3Q13461 319 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 FAM106AQ4KMX7 169 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 SMUG1Q53HV7 270 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 DNLZQ5SXM8 178 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 GPHB5Q86YW7 130 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 HIST3H2BBQ8N257 126 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 Q8N2B8 174 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 GBGT1Q8N5D6 347 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 RNF152Q8N8N0 203 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 C20orf173Q96LM9 149 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 PACRGQ96M98 296 aaPredicted RBP5.62□□□□□ -1.51
ATXN3-221ENST00000553498 PEF1Q9UBV8 284 aaKnown RBP5.62□□□□□ -1.51
ATXN3-221ENST00000553498 RPH3ALQ9UNE2 315 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 LENEPQ9Y5L5 61 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 X6R8D5 127 aa5.62□□□□□ -1.51
ATXN3-221ENST00000553498 SNURFLB1AK76 121 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 H3BTX0 84 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 CHEK1O14757 476 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 YLPM1P49750 1951 aaKnown RBP5.61□□□□□ -1.51
ATXN3-221ENST00000553498 Q0VG73 95 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 OR10J3Q5JRS4 329 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 LCN12Q6JVE5 192 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 PRR27Q6MZM9 219 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 RBPMS2Q6ZRY4 209 aaKnown RBP5.61□□□□□ -1.51
ATXN3-221ENST00000553498 PRNTQ86SH4 94 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 NUP35Q8NFH5 326 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 OR4X2Q8NGF9 303 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 C17orf77Q96MU5 243 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 NEU1Q99519 415 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 DAZ1Q9NQZ3 744 aaKnown RBP5.61□□□□□ -1.51
ATXN3-221ENST00000553498 UFC1Q9Y3C8 167 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 SMAD5-AS1Q9Y6J3 95 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 DCHS2Q6V1P9 2916 aa5.61□□□□□ -1.51
ATXN3-221ENST00000553498 ZNF462Q96JM2 2506 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 ABCA4P78363 2273 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 TET2Q6N021 2002 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-221ENST00000553498 TRBV7-9A0A0J9YWB2 115 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 HIGD1CA8MV81 97 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 SNRPCP09234 159 aaKnown RBP5.6□□□□□ -1.51
ATXN3-221ENST00000553498 ESDP10768 282 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 FAM162BQ5T6X4 162 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 TMEM136Q6ZRR5 245 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 BCL6BQ8N143 479 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-221ENST00000553498 NHLRC2Q8NBF2 726 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 MYOZ3Q8TDC0 251 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 GLMPQ8WWB7 406 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 TMEM18Q96B42 140 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 BORCS7Q96B45 105 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 UBE2E2Q96LR5 201 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 NOL4LQ96MY1 436 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-221ENST00000553498 PRR25Q96S07 402 aa5.6□□□□□ -1.51
ATXN3-221ENST00000553498 TPRP12270 2363 aaKnown RBP5.59□□□□□ -1.51
ATXN3-221ENST00000553498 DIDO1Q9BTC0 2240 aaKnown RBP5.59□□□□□ -1.51
ATXN3-221ENST00000553498 TRAV8-1A0A0A6YYK1 113 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 IGHV7-4-1A0A0J9YVY3 117 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 A0A1B0GXF2 115 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 A8MWP6 167 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 M0R3E3 92 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 LGALS9O00182 355 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 OVOL1O14753 267 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 HOXA3O43365 443 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-221ENST00000553498 APCSP02743 223 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 LGALS1P09382 135 aaKnown RBP5.59□□□□□ -1.51
ATXN3-221ENST00000553498 CRISP2P16562 243 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 CBLN1P23435 193 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 PAFAH1B2P68402 229 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 HBBP68871 147 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 S100A12P80511 92 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 RIGQ13278 110 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 C9orf47Q6ZRZ4 202 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 GATD1Q8NB37 220 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 OR2D3Q8NGH3 330 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 ZC2HC1AQ96GY0 325 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 C12orf57Q99622 126 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 ASCL2Q99929 193 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 KLK15Q9H2R5 256 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 TMEM160Q9NX00 188 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 LINC00527Q9UJ94 153 aa5.59□□□□□ -1.51
ATXN3-221ENST00000553498 NBASA2RRP1 2371 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms