RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 C16orf92Q96LL3 132 aa13.3□□□□□ -0.28
PSEN1-206ENST00000553447 IGF2BP2-AS1Q96M15 143 aa13.3□□□□□ -0.28
PSEN1-206ENST00000553447 MLXQ9UH92 298 aa13.3□□□□□ -0.28
PSEN1-206ENST00000553447 C2CD3Q4AC94 2353 aa13.3□□□□□ -0.28
PSEN1-206ENST00000553447 C7orf77A4D0Y5 90 aa13.29□□□□□ -0.28
PSEN1-206ENST00000553447 PGPEP1LA6NFU8 196 aa13.29□□□□□ -0.28
PSEN1-206ENST00000553447 ISLRO14498 428 aa13.29□□□□□ -0.28
PSEN1-206ENST00000553447 CSN3P07498 182 aa13.29□□□□□ -0.28
PSEN1-206ENST00000553447 GNG4P50150 75 aa13.29□□□□□ -0.28
PSEN1-206ENST00000553447 UBE2G1P62253 170 aa13.29□□□□□ -0.28
PSEN1-206ENST00000553447 RHEBQ15382 184 aa13.29□□□□□ -0.28
PSEN1-206ENST00000553447 LINC01551Q86U37 167 aa13.29□□□□□ -0.28
PSEN1-206ENST00000553447 RNF182Q8N6D2 247 aa13.29□□□□□ -0.28
PSEN1-206ENST00000553447 FMC1Q96HJ9 113 aa13.29□□□□□ -0.28
PSEN1-206ENST00000553447 CLEC5AQ9NY25 188 aa13.29□□□□□ -0.28
PSEN1-206ENST00000553447 LY96Q9Y6Y9 160 aa13.29□□□□□ -0.28
PSEN1-206ENST00000553447 IGKV3-7A0A075B6H7 116 aa13.28□□□□□ -0.28
PSEN1-206ENST00000553447 SERTM2A0A1B0GWG4 89 aa13.28□□□□□ -0.28
PSEN1-206ENST00000553447 K7EQM0 130 aa13.28□□□□□ -0.28
PSEN1-206ENST00000553447 LCN12Q6JVE5 192 aa13.28□□□□□ -0.28
PSEN1-206ENST00000553447 TMEM75Q8N9X5 138 aa13.28□□□□□ -0.28
PSEN1-206ENST00000553447 OCC1Q8TAD7 63 aa13.28□□□□□ -0.28
PSEN1-206ENST00000553447 MRPL53Q96EL3 112 aaKnown RBP13.28□□□□□ -0.28
PSEN1-206ENST00000553447 TRBV6-1A0A0K0K1D8 114 aa13.27□□□□□ -0.29
PSEN1-206ENST00000553447 ZNF705FA8MVS1 300 aaPredicted RBP13.27□□□□□ -0.29
PSEN1-206ENST00000553447 B4DEV8 164 aa13.27□□□□□ -0.29
PSEN1-206ENST00000553447 OVOL1O14753 267 aa13.27□□□□□ -0.29
PSEN1-206ENST00000553447 PSG3Q16557 428 aa13.27□□□□□ -0.29
PSEN1-206ENST00000553447 SAMD13Q5VXD3 122 aa13.27□□□□□ -0.29
PSEN1-206ENST00000553447 SGK494Q96LW2 274 aa13.27□□□□□ -0.29
PSEN1-206ENST00000553447 RPS10P5Q9NQ39 176 aa13.27□□□□□ -0.29
PSEN1-206ENST00000553447 AURKAIP1Q9NWT8 199 aaPredicted RBP13.27□□□□□ -0.29
PSEN1-206ENST00000553447 IGLV2-11P01706 119 aa13.26□□□□□ -0.29
PSEN1-206ENST00000553447 IGLV2-8P01709 118 aa13.26□□□□□ -0.29
PSEN1-206ENST00000553447 PRB4P10163 310 aaPredicted RBP13.26□□□□□ -0.29
PSEN1-206ENST00000553447 Q86TA4 180 aa13.26□□□□□ -0.29
PSEN1-206ENST00000553447 MS4A6AQ9H2W1 248 aa13.26□□□□□ -0.29
PSEN1-206ENST00000553447 IGKV2-40A0A087WW87 121 aaPredicted RBP13.25□□□□□ -0.29
PSEN1-206ENST00000553447 TRAV8-1A0A0A6YYK1 113 aa13.25□□□□□ -0.29
PSEN1-206ENST00000553447 IGKV2D-40P01614 121 aaPredicted RBP13.25□□□□□ -0.29
PSEN1-206ENST00000553447 KRTAP24-1Q3LI83 254 aa13.25□□□□□ -0.29
PSEN1-206ENST00000553447 BAGE2Q86Y30 109 aa13.25□□□□□ -0.29
PSEN1-206ENST00000553447 GBGT1Q8N5D6 347 aa13.25□□□□□ -0.29
PSEN1-206ENST00000553447 DYNLRB2Q8TF09 96 aa13.25□□□□□ -0.29
PSEN1-206ENST00000553447 DCANP1Q8TF63 244 aa13.25□□□□□ -0.29
PSEN1-206ENST00000553447 ISOC2Q96AB3 205 aa13.25□□□□□ -0.29
PSEN1-206ENST00000553447 C20orf173Q96LM9 149 aa13.25□□□□□ -0.29
PSEN1-206ENST00000553447 CITED1Q99966 193 aa13.25□□□□□ -0.29
PSEN1-206ENST00000553447 PRAC2D3DTV9 90 aa13.24□□□□□ -0.29
PSEN1-206ENST00000553447 K7EN84 100 aa13.24□□□□□ -0.29
PSEN1-206ENST00000553447 LTAP01374 205 aa13.24□□□□□ -0.29
PSEN1-206ENST00000553447 FLI1Q01543 452 aaPredicted RBP13.24□□□□□ -0.29
PSEN1-206ENST00000553447 PRNTQ86SH4 94 aa13.24□□□□□ -0.29
PSEN1-206ENST00000553447 SMIM12Q96EX1 92 aa13.24□□□□□ -0.29
PSEN1-206ENST00000553447 PSG8Q9UQ74 426 aa13.24□□□□□ -0.29
PSEN1-206ENST00000553447 A0A087WWC5 75 aa13.23□□□□□ -0.29
PSEN1-206ENST00000553447 RBAKDNA6NC62 111 aa13.23□□□□□ -0.29
PSEN1-206ENST00000553447 FBLL1A6NHQ2 334 aaKnown RBP13.23□□□□□ -0.29
PSEN1-206ENST00000553447 K7EQG2 157 aa13.23□□□□□ -0.29
PSEN1-206ENST00000553447 TSPAN4O14817 238 aa13.23□□□□□ -0.29
PSEN1-206ENST00000553447 ID1P41134 155 aa13.23□□□□□ -0.29
PSEN1-206ENST00000553447 PRIMA1Q86XR5 153 aa13.23□□□□□ -0.29
PSEN1-206ENST00000553447 WFDC3Q8IUB2 231 aa13.23□□□□□ -0.29
PSEN1-206ENST00000553447 NHLRC2Q8NBF2 726 aa13.23□□□□□ -0.29
PSEN1-206ENST00000553447 ZNF738Q8NE65 137 aa13.23□□□□□ -0.29
PSEN1-206ENST00000553447 SIGLEC8Q9NYZ4 499 aa13.23□□□□□ -0.29
PSEN1-206ENST00000553447 DNASE2O00115 360 aaPredicted RBP13.22□□□□□ -0.29
PSEN1-206ENST00000553447 GCGP01275 180 aa13.22□□□□□ -0.29
PSEN1-206ENST00000553447 MT-ND4LP03901 98 aa13.22□□□□□ -0.29
PSEN1-206ENST00000553447 TFPI2P48307 235 aa13.22□□□□□ -0.29
PSEN1-206ENST00000553447 PAFAH1B2P68402 229 aa13.22□□□□□ -0.29
PSEN1-206ENST00000553447 BTN1A1Q13410 526 aa13.22□□□□□ -0.29
PSEN1-206ENST00000553447 DEFB114Q30KQ6 69 aa13.22□□□□□ -0.29
PSEN1-206ENST00000553447 RNF212Q495C1 297 aa13.22□□□□□ -0.29
PSEN1-206ENST00000553447 VGLL1Q99990 258 aa13.22□□□□□ -0.29
PSEN1-206ENST00000553447 MLST8Q9BVC4 326 aa13.22□□□□□ -0.29
PSEN1-206ENST00000553447 MGST1P10620 155 aaKnown RBP13.21□□□□□ -0.29
PSEN1-206ENST00000553447 OR5I1Q13606 314 aa13.21□□□□□ -0.29
PSEN1-206ENST00000553447 TMEM88Q6PEY1 159 aa13.21□□□□□ -0.29
PSEN1-206ENST00000553447 RBPMS2Q6ZRY4 209 aaKnown RBP13.21□□□□□ -0.29
PSEN1-206ENST00000553447 TMEM183AQ8IXX5 376 aa13.21□□□□□ -0.29
PSEN1-206ENST00000553447 TMEM61Q8N0U2 210 aa13.21□□□□□ -0.29
PSEN1-206ENST00000553447 CTDSP1Q9GZU7 261 aa13.21□□□□□ -0.29
PSEN1-206ENST00000553447 ZFP30Q9Y2G7 519 aa13.21□□□□□ -0.29
PSEN1-206ENST00000553447 TRAV2A0A0B4J234 112 aa13.2□□□□□ -0.3
PSEN1-206ENST00000553447 PF4P02776 101 aa13.2□□□□□ -0.3
PSEN1-206ENST00000553447 CBLN2Q8IUK8 224 aa13.2□□□□□ -0.3
PSEN1-206ENST00000553447 FAM24BQ8N5W8 94 aa13.2□□□□□ -0.3
PSEN1-206ENST00000553447 ANAPC16Q96DE5 110 aa13.2□□□□□ -0.3
PSEN1-206ENST00000553447 SFRP2Q96HF1 295 aa13.2□□□□□ -0.3
PSEN1-206ENST00000553447 SMCO4Q9NRQ5 59 aa13.2□□□□□ -0.3
PSEN1-206ENST00000553447 TRAV25A0A0B4J276 109 aa13.19□□□□□ -0.3
PSEN1-206ENST00000553447 ERCC8Q13216 396 aa13.19□□□□□ -0.3
PSEN1-206ENST00000553447 CD300EQ496F6 205 aaPredicted RBP13.19□□□□□ -0.3
PSEN1-206ENST00000553447 LINC00482Q8N8I6 264 aa13.19□□□□□ -0.3
PSEN1-206ENST00000553447 ASCL2Q99929 193 aa13.19□□□□□ -0.3
PSEN1-206ENST00000553447 TMEM242Q9NWH2 141 aa13.19□□□□□ -0.3
PSEN1-206ENST00000553447 PPP1R2P9O14990 202 aa13.18□□□□□ -0.3
PSEN1-206ENST00000553447 ZNF688P0C7X2 276 aa13.18□□□□□ -0.3
PSEN1-206ENST00000553447 SNRPD3P62318 126 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms