RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 IFNGR2P38484 337 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 SSR2P43308 183 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 ERVS71-1P61550 626 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 DYNLT1P63172 113 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 EIF5AP63241 154 aaKnown RBP2.35□□□□□ -2.03
LIMA1-205ENST00000550592 FAM3AP98173 230 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 SCGB2B2Q4G0G5 96 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 FAM162BQ5T6X4 162 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 SAMD13Q5VXD3 122 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 EIF5AL1Q6IS14 154 aaKnown RBP2.35□□□□□ -2.03
LIMA1-205ENST00000550592 BOD1L2Q8IYS8 172 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 SVBPQ8N300 66 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 C9orf62Q8N4C0 152 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 OR8B3Q8NGG8 313 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 ZNF431Q8TF32 576 aaPredicted RBP2.35□□□□□ -2.03
LIMA1-205ENST00000550592 TNFAIP8L1Q8WVP5 186 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 ASB17Q8WXJ9 295 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 SLC7A6Q92536 515 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 MAL2Q969L2 176 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 TMEM56Q96MV1 263 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 ERMAPQ96PL5 475 aaPredicted RBP2.35□□□□□ -2.03
LIMA1-205ENST00000550592 OR8B2Q96RD0 313 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 CCDC32Q9BV29 185 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 HRASLSQ9HDD0 168 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 SCN3BQ9NY72 215 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 TAS2R13Q9NYV9 303 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 FBXO5Q9UKT4 447 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 TMEM56-RWDD3S4R434 201 aa2.35□□□□□ -2.03
LIMA1-205ENST00000550592 TGIF2-C20orf24A0A0A6YYL0 155 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 TMEM213A2RRL7 107 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 OR11H12B2RN74 326 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 SLC17A3O00476 420 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 COPEO14579 308 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 PDE6DO43924 150 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 BRI3O95415 125 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 TCRBP04435 133 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 BPGMP07738 259 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 UCHL1P09936 223 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 FGF7P21781 194 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 S100A7P31151 101 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 INSL3P51460 131 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 CRYBA4P53673 196 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 OR10A3P58181 314 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 FABP9Q0Z7S8 132 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 RSU1Q15404 277 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 MAPK14Q16539 360 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 ARHGAP11BQ3KRB8 267 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 KRTAP25-1Q3LHN0 102 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 COL5A1-AS1Q5SY13 56 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 HIST2H3PS2Q5TEC6 136 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 TMPPEQ6ZT21 453 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 LYG2Q86SG7 212 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 CLDN22Q8N7P3 220 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 BPIFB6Q8NFQ5 453 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 OR11H1Q8NG94 326 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 OR10K1Q8NGX5 313 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 OR11H2Q8NH07 326 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 OR10A6Q8NH74 314 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 OR5K1Q8NHB7 308 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 APOBEC3DQ96AK3 386 aaPredicted RBP2.34□□□□□ -2.03
LIMA1-205ENST00000550592 LINC00052Q96N35 136 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 CMSS1Q9BQ75 279 aaKnown RBP2.34□□□□□ -2.03
LIMA1-205ENST00000550592 GABARAPL1Q9H0R8 117 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 TMEM106BQ9NUM4 274 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 SMPXQ9UHP9 88 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 ZFP30Q9Y2G7 519 aa2.34□□□□□ -2.03
LIMA1-205ENST00000550592 IGLV3-9A0A075B6K5 115 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 TMEM218A2RU14 115 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 A8MWP6 167 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 EFCAB9A8MZ26 197 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 H0Y980 276 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 TMEM250H0YL14 139 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 FAAHO00519 579 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 ORC5O43913 435 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 HPGDSO60760 199 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 MRPS14O60783 128 aaKnown RBP2.33□□□□□ -2.04
LIMA1-205ENST00000550592 PIAS1O75925 651 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 CD200P41217 278 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 PIGPP57054 158 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 KRTAP10-1P60331 282 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 CKS1BP61024 79 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 RRAS2P62070 204 aaPredicted RBP2.33□□□□□ -2.04
LIMA1-205ENST00000550592 LSM6P62312 80 aaKnown RBP2.33□□□□□ -2.04
LIMA1-205ENST00000550592 FOXF1Q12946 379 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 PEA15Q15121 130 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 TSNQ15631 228 aaKnown RBP2.33□□□□□ -2.04
LIMA1-205ENST00000550592 NEDD8Q15843 81 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 ZNF141Q15928 474 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 TRMT12Q53H54 448 aaKnown RBP2.33□□□□□ -2.04
LIMA1-205ENST00000550592 Q5BKY6 102 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 OR10J3Q5JRS4 329 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 AAED1Q7RTV5 226 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 BAP18Q8IXM2 172 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 YIPF7Q8N8F6 280 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 GATD1Q8NB37 220 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 OR5AK3PQ8NH89 298 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 MCFD2Q8NI22 146 aa2.33□□□□□ -2.04
LIMA1-205ENST00000550592 CMTM2Q8TAZ6 248 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms