RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 FAM223BA6NKX1 122 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 NPFFO15130 113 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 NUPR1O60356 82 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 LEPROTL1O95214 131 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 CTSGP08311 255 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 SNRPCP09234 159 aaKnown RBP3.4□□□□□ -1.86
CCDC59-204ENST00000550589 GATA3P23771 443 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 CD24P25063 80 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 ZFP36P26651 326 aaKnown RBP3.4□□□□□ -1.86
CCDC59-204ENST00000550589 SAA4P35542 130 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 DSCR9P59020 149 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 SRSF2Q01130 221 aaKnown RBP3.4□□□□□ -1.86
CCDC59-204ENST00000550589 KLK9Q2XQG4 91 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 C15orf32Q32M92 178 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 RNASEKQ6P5S7 137 aaKnown RBP3.4□□□□□ -1.86
CCDC59-204ENST00000550589 TCF24Q7RTU0 167 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 SMIM15Q7Z3B0 74 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 COX8CQ7Z4L0 72 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 NIT1Q86X76 327 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 FAM223AQ8IWN6 122 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 BCL6BQ8N143 479 aaPredicted RBP3.4□□□□□ -1.86
CCDC59-204ENST00000550589 Q8N9W7 124 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 ITLN2Q8WWU7 325 aaPredicted RBP3.4□□□□□ -1.86
CCDC59-204ENST00000550589 TMEM70Q9BUB7 260 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 MAP1LC3CQ9BXW4 147 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 MEGF9Q9H1U4 602 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 KLK9Q9UKQ9 250 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 TP53TG3Q9ULZ0 132 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 MOB4Q9Y3A3 225 aa3.4□□□□□ -1.86
CCDC59-204ENST00000550589 DSPP15924 2871 aaKnown RBP3.4□□□□□ -1.87
CCDC59-204ENST00000550589 PIEZO2Q9H5I5 2752 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 TRAV8-1A0A0A6YYK1 113 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 CENPVL3A0A0U1RRI6 287 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 SH2D7A6NKC9 451 aaPredicted RBP3.4□□□□□ -1.87
CCDC59-204ENST00000550589 FABP5P3A8MUU1 101 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 F2Z2F3 143 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 H3BTX0 84 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 H3BUA1 57 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 MRPS12O15235 138 aaKnown RBP3.4□□□□□ -1.87
CCDC59-204ENST00000550589 IGLV2-11P01706 119 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 CLEC3BP05452 202 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 RHOGP84095 191 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 ATP5G2Q06055 141 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 CDSNQ15517 529 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 ECSCRQ19T08 205 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 PSMG4Q5JS54 123 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 KLF17Q5JT82 389 aaPredicted RBP3.4□□□□□ -1.87
CCDC59-204ENST00000550589 LDLRAD2Q5SZI1 272 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 RUSC1-AS1Q66K80 236 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 PRSS3P2Q8NHM4 247 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 MRPL53Q96EL3 112 aaKnown RBP3.4□□□□□ -1.87
CCDC59-204ENST00000550589 WWC2-AS2Q96NR7 200 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 CCL19Q99731 98 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 ASCL2Q99929 193 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 TMEM191AQ9H0A3 160 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 PAM16Q9Y3D7 125 aa3.4□□□□□ -1.87
CCDC59-204ENST00000550589 TPRP12270 2363 aaKnown RBP3.39□□□□□ -1.87
CCDC59-204ENST00000550589 TLN1Q9Y490 2541 aaKnown RBP3.39□□□□□ -1.87
CCDC59-204ENST00000550589 SPTBN2O15020 2390 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 A0A087X0K7 114 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 LOC102724200A0A096LPH7 203 aaPredicted RBP3.39□□□□□ -1.87
CCDC59-204ENST00000550589 A0A0G2JLM5 398 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 A0A1B0GUS0 222 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 CRXO43186 299 aaPredicted RBP3.39□□□□□ -1.87
CCDC59-204ENST00000550589 PPBPP02775 128 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 C3orf79P0CE67 100 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 GPR183P32249 361 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 LMO4P61968 165 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 PAX8Q06710 450 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 SPATA45Q537H7 98 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 TMEM78Q5T7P6 136 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 ASPHD1Q5U4P2 390 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 SAMD13Q5VXD3 122 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 C16orf54Q6UWD8 224 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 ZNF493Q6ZR52 646 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 FA2HQ7L5A8 372 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 ZNF502Q8TBZ5 544 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 GTSF1Q8WW33 167 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 USMG5Q96IX5 58 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 PRR25Q96S07 402 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 TPPP3Q9BW30 176 aa3.39□□□□□ -1.87
CCDC59-204ENST00000550589 TRAV9-2A0A087WT02 112 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 IGHV1-69DA0A0B4J2H0 117 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 ATP6V0E1O15342 81 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 BUB3O43684 328 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 BRI3O95415 125 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 IGHV1-69P01742 117 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 GNLYP22749 145 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 LCN12Q6JVE5 192 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 PET117Q6UWS5 81 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 LINC00322Q6ZN03 302 aaPredicted RBP3.38□□□□□ -1.87
CCDC59-204ENST00000550589 ORMDL3Q8N138 153 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 FAM19A2Q8N3H0 131 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 LINC00469Q8N7U9 141 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 GATD1Q8NB37 220 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 OR10AG1Q8NH19 301 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 ZC2HC1AQ96GY0 325 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 RCHY1Q96PM5 261 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 LAMTOR2Q9Y2Q5 125 aa3.38□□□□□ -1.87
CCDC59-204ENST00000550589 LENEPQ9Y5L5 61 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms