RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 ODF3Q96PU9 254 aa7.69□□□□□ -1.18
VTI1BP3-201ENST00000550220 SEC22CQ9BRL7 303 aa7.69□□□□□ -1.18
VTI1BP3-201ENST00000550220 ATG101Q9BSB4 218 aa7.69□□□□□ -1.18
VTI1BP3-201ENST00000550220 C11orf1Q9H5F2 150 aa7.69□□□□□ -1.18
VTI1BP3-201ENST00000550220 SLC39A9Q9NUM3 307 aa7.69□□□□□ -1.18
VTI1BP3-201ENST00000550220 PRSS29PA6NIE9 313 aa7.68□□□□□ -1.18
VTI1BP3-201ENST00000550220 M0R2N4 97 aa7.68□□□□□ -1.18
VTI1BP3-201ENST00000550220 HTN1P15515 57 aa7.68□□□□□ -1.18
VTI1BP3-201ENST00000550220 AZU1P20160 251 aa7.68□□□□□ -1.18
VTI1BP3-201ENST00000550220 LEPP41159 167 aa7.68□□□□□ -1.18
VTI1BP3-201ENST00000550220 CCL18P55774 89 aa7.68□□□□□ -1.18
VTI1BP3-201ENST00000550220 CYCSP99999 105 aaKnown RBP7.68□□□□□ -1.18
VTI1BP3-201ENST00000550220 BAXQ07812 192 aa7.68□□□□□ -1.18
VTI1BP3-201ENST00000550220 PDE6HQ13956 83 aa7.68□□□□□ -1.18
VTI1BP3-201ENST00000550220 MIC13Q5XKP0 118 aa7.68□□□□□ -1.18
VTI1BP3-201ENST00000550220 MRPL53Q96EL3 112 aaKnown RBP7.68□□□□□ -1.18
VTI1BP3-201ENST00000550220 SAT2Q96F10 170 aaPredicted RBP7.68□□□□□ -1.18
VTI1BP3-201ENST00000550220 TMEM14CQ9P0S9 112 aa7.68□□□□□ -1.18
VTI1BP3-201ENST00000550220 PRELID1Q9Y255 219 aa7.68□□□□□ -1.18
VTI1BP3-201ENST00000550220 PLAC8L1A1L4L8 177 aa7.67□□□□□ -1.18
VTI1BP3-201ENST00000550220 H3BQ15 152 aa7.67□□□□□ -1.18
VTI1BP3-201ENST00000550220 PRM2P04554 102 aa7.67□□□□□ -1.18
VTI1BP3-201ENST00000550220 HIST1H1EP10412 219 aaKnown RBP7.67□□□□□ -1.18
VTI1BP3-201ENST00000550220 ASAH1Q13510 395 aa7.67□□□□□ -1.18
VTI1BP3-201ENST00000550220 RAB32Q13637 225 aa7.67□□□□□ -1.18
VTI1BP3-201ENST00000550220 Q6ZR54 194 aa7.67□□□□□ -1.18
VTI1BP3-201ENST00000550220 RNASE8Q8TDE3 154 aaKnown RBP7.67□□□□□ -1.18
VTI1BP3-201ENST00000550220 SLC25A31Q9H0C2 315 aa7.67□□□□□ -1.18
VTI1BP3-201ENST00000550220 HECTD4Q9Y4D8 3996 aa7.67□□□□□ -1.18
VTI1BP3-201ENST00000550220 UBE2L5PA0A1B0GUS4 154 aa7.66□□□□□ -1.18
VTI1BP3-201ENST00000550220 E5RGE8 158 aa7.66□□□□□ -1.18
VTI1BP3-201ENST00000550220 SLC17A3O00476 420 aa7.66□□□□□ -1.18
VTI1BP3-201ENST00000550220 FGF7P21781 194 aa7.66□□□□□ -1.18
VTI1BP3-201ENST00000550220 C1orf134Q5TEV5 83 aa7.66□□□□□ -1.18
VTI1BP3-201ENST00000550220 ENKURQ8TC29 256 aa7.66□□□□□ -1.18
VTI1BP3-201ENST00000550220 ZNF503Q96F45 646 aa7.66□□□□□ -1.18
VTI1BP3-201ENST00000550220 LINC00477Q96M19 166 aa7.66□□□□□ -1.18
VTI1BP3-201ENST00000550220 PYGO2Q9BRQ0 406 aa7.66□□□□□ -1.18
VTI1BP3-201ENST00000550220 NMES1Q9C002 83 aa7.66□□□□□ -1.18
VTI1BP3-201ENST00000550220 AAMDCQ9H7C9 122 aa7.66□□□□□ -1.18
VTI1BP3-201ENST00000550220 NOP10Q9NPE3 64 aaKnown RBP7.66□□□□□ -1.18
VTI1BP3-201ENST00000550220 KCNIP2Q9NS61 270 aa7.66□□□□□ -1.18
VTI1BP3-201ENST00000550220 TIMM9Q9Y5J7 89 aa7.66□□□□□ -1.18
VTI1BP3-201ENST00000550220 IGLV2-18A0A075B6J9 118 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 TRBV19A0A075B6N1 114 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 TRAV5A0A0B4J249 113 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 IGSF23A1L1A6 192 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 SNURFLB1AK76 121 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 PRAC2D3DTV9 90 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 NPIPB6E9PJ23 425 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 RTL8CO15255 209 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 PRAF2O60831 178 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 NUDT3O95989 172 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 SLC25A5P05141 298 aaKnown RBP7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 SNRPCP09234 159 aaKnown RBP7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 FCN2Q15485 313 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 GFI1BQ5VTD9 330 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 MORN5Q5VZ52 161 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 NPCDR1Q9BY65 106 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 ZNF586Q9NXT0 402 aa7.65□□□□□ -1.18
VTI1BP3-201ENST00000550220 A0A1B0GVY2 172 aa7.64□□□□□ -1.19
VTI1BP3-201ENST00000550220 H3BTX0 84 aa7.64□□□□□ -1.19
VTI1BP3-201ENST00000550220 NMBP08949 121 aa7.64□□□□□ -1.19
VTI1BP3-201ENST00000550220 CT45A10P0DMU9 189 aa7.64□□□□□ -1.19
VTI1BP3-201ENST00000550220 MED14OSP0DP75 135 aa7.64□□□□□ -1.19
VTI1BP3-201ENST00000550220 DAZ2Q13117 558 aaKnown RBP7.64□□□□□ -1.19
VTI1BP3-201ENST00000550220 CLINT1Q14677 625 aa7.64□□□□□ -1.19
VTI1BP3-201ENST00000550220 LINC00612Q8N6U2 182 aa7.64□□□□□ -1.19
VTI1BP3-201ENST00000550220 C17orf112F2Z3M2 114 aa7.63□□□□□ -1.19
VTI1BP3-201ENST00000550220 H3BNG1 76 aa7.63□□□□□ -1.19
VTI1BP3-201ENST00000550220 UPK1BO75841 260 aa7.63□□□□□ -1.19
VTI1BP3-201ENST00000550220 M6PRP20645 277 aa7.63□□□□□ -1.19
VTI1BP3-201ENST00000550220 OR5I1Q13606 314 aa7.63□□□□□ -1.19
VTI1BP3-201ENST00000550220 ZNF680Q8NEM1 530 aa7.63□□□□□ -1.19
VTI1BP3-201ENST00000550220 OR5C1Q8NGR4 320 aa7.63□□□□□ -1.19
VTI1BP3-201ENST00000550220 LINC00467Q9BRT7 94 aa7.63□□□□□ -1.19
VTI1BP3-201ENST00000550220 TRAV12-3A0A0B4J271 114 aa7.62□□□□□ -1.19
VTI1BP3-201ENST00000550220 C7orf71A4D174 169 aa7.62□□□□□ -1.19
VTI1BP3-201ENST00000550220 NBEAP1P0C6P0 100 aa7.62□□□□□ -1.19
VTI1BP3-201ENST00000550220 PET100P0DJ07 73 aa7.62□□□□□ -1.19
VTI1BP3-201ENST00000550220 NHLH2Q02577 135 aa7.62□□□□□ -1.19
VTI1BP3-201ENST00000550220 C9orf47Q6ZRZ4 202 aa7.62□□□□□ -1.19
VTI1BP3-201ENST00000550220 ZNRF2Q8NHG8 242 aa7.62□□□□□ -1.19
VTI1BP3-201ENST00000550220 RXFP4Q8TDU9 374 aa7.62□□□□□ -1.19
VTI1BP3-201ENST00000550220 RNF141Q8WVD5 230 aa7.62□□□□□ -1.19
VTI1BP3-201ENST00000550220 GNPNAT1Q96EK6 184 aaPredicted RBP7.62□□□□□ -1.19
VTI1BP3-201ENST00000550220 C18orf15Q96N68 181 aa7.62□□□□□ -1.19
VTI1BP3-201ENST00000550220 MRPL32Q9BYC8 188 aaKnown RBP7.62□□□□□ -1.19
VTI1BP3-201ENST00000550220 TRBV7-9A0A0J9YWB2 115 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 NBDYA0A0U1RRE5 68 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 KLLNB2CW77 178 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 INMT-MINDY4F8WBC2 141 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 J3KRW8 73 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 NDUFB4O95168 129 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 GPX1P07203 203 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 CRISP2P16562 243 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 CSN1S1P47710 185 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 DEFA1P59665 94 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 DEFA3P59666 94 aa7.61□□□□□ -1.19
VTI1BP3-201ENST00000550220 KIR3DS1Q14943 382 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms