RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 MT-ND6P03923 174 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 CRYGSP22914 178 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 NCS1P62166 190 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 SELENOWP63302 87 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 QRFPP83859 136 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 HIST1H1AQ02539 215 aaPredicted RBP1.19□□□□□ -2.22
CCDC38-208ENST00000549876 TMEM14EPQ6UXP3 125 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 LRRC18Q8N456 261 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 MORN4Q8NDC4 146 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 BRK1Q8WUW1 75 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 SFT2D1Q8WV19 159 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 DIRC1Q969H9 104 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 CHCHD1Q96BP2 118 aaKnown RBP1.19□□□□□ -2.22
CCDC38-208ENST00000549876 CDK5RAP2Q96SN8 1893 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 BICRAQ9NZM4 1560 aa1.19□□□□□ -2.22
CCDC38-208ENST00000549876 ZFHX2Q9C0A1 2572 aaPredicted RBP1.19□□□□□ -2.22
CCDC38-208ENST00000549876 CCDC171Q6TFL3 1326 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 DSPPQ9NZW4 1301 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 KDM5CP41229 1560 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 FRMPD1Q5SYB0 1578 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 A0A087WSZ3 146 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 TRAV14DV4A0A0A6YYC5 116 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.18□□□□□ -2.22
CCDC38-208ENST00000549876 FAM92AA1XBS5 289 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 PRB1P04280 392 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 SAA1P0DJI8 122 aaPredicted RBP1.18□□□□□ -2.22
CCDC38-208ENST00000549876 TPT1P13693 172 aaKnown RBP1.18□□□□□ -2.22
CCDC38-208ENST00000549876 HIST1H1BP16401 226 aaKnown RBP1.18□□□□□ -2.22
CCDC38-208ENST00000549876 BRS3P32247 399 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 DSCR4P56555 118 aaPredicted RBP1.18□□□□□ -2.22
CCDC38-208ENST00000549876 DNAJB13P59910 316 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 MAXP61244 160 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 DEFB113Q30KQ7 82 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 ASB16-AS1Q495Z4 193 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 HSD17B12Q53GQ0 312 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 PCOTHQ58A44 107 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 TMEM244Q5VVB8 128 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 HAGHLQ6PII5 290 aaPredicted RBP1.18□□□□□ -2.22
CCDC38-208ENST00000549876 TSTD1Q8NFU3 115 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 OR2T35Q8NGX2 323 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 OR10AC1Q8NH08 325 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 OR4C6Q8NH72 309 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 TMEM254Q8TBM7 123 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 POP5Q969H6 163 aaKnown RBP1.18□□□□□ -2.22
CCDC38-208ENST00000549876 ZC2HC1AQ96GY0 325 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 HYLS1Q96M11 299 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 Q96M85 177 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 SMIM3Q9BZL3 60 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 COL4A5P29400 1685 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 DLC1Q96QB1 1528 aa1.18□□□□□ -2.22
CCDC38-208ENST00000549876 MYO5AQ9Y4I1 1855 aaKnown RBP1.18□□□□□ -2.22
CCDC38-208ENST00000549876 RIMS1Q86UR5 1692 aaKnown RBP1.17□□□□□ -2.22
CCDC38-208ENST00000549876 PRG4Q92954 1404 aaPredicted RBP1.17□□□□□ -2.22
CCDC38-208ENST00000549876 TRGV2A0A075B6R0 118 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 TRBV6-5A0A0K0K1A5 114 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 hDV103S1A0JD37 113 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 B4DSR2 109 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 E7EUB6 86 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 YPEL1O60688 119 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 IGLV1-51P01701 117 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 HBDP02042 147 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 APOC1P02654 83 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 HLA-DRB4P13762 266 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 FABP4P15090 132 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 S100A1P23297 94 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 ZNF93P35789 620 aaPredicted RBP1.17□□□□□ -2.22
CCDC38-208ENST00000549876 RPS25P62851 125 aaKnown RBP1.17□□□□□ -2.22
CCDC38-208ENST00000549876 CDK6Q00534 326 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 CDK5R1Q15078 307 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 WHAMMP3Q1A5X7 153 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 C1orf137Q5JT78 98 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 C10orf55Q5SWW7 151 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 GLYATL3Q5SZD4 288 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 CTAGE3PQ8IX95 158 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 TEX29Q8N6K0 151 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 Q8N814 137 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 OR5D14Q8NGL3 314 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 CCL4L1Q8NHW4 92 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 C4orf3Q8WVX3 66 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 TMEM203Q969S6 136 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 MUCL1Q96DR8 90 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 ERG28Q9UKR5 140 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 TPRKBQ9Y3C4 175 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 HLA-DRB4X5D2U9 266 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 TANC2Q9HCD6 1990 aa1.17□□□□□ -2.22
CCDC38-208ENST00000549876 FN1P02751 2386 aaKnown RBP1.16□□□□□ -2.22
CCDC38-208ENST00000549876 RGS12O14924 1447 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 FAM135BQ49AJ0 1406 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 TNS3Q68CZ2 1445 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 SMG6Q86US8 1419 aaKnown RBP1.16□□□□□ -2.22
CCDC38-208ENST00000549876 ZFC3H1O60293 1989 aaKnown RBP1.16□□□□□ -2.22
CCDC38-208ENST00000549876 TRAV27A0A087WT01 109 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 IGKV2D-26A0A0A0MRZ7 120 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 PNMA8CA0A1B0GUJ8 204 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 LOC107986453A0A1B0GWG9 222 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 TCRBV4S1A1TA0A5B7 111 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 ZNF727A8MUV8 499 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 MIF4GDA9UHW6 222 aaKnown RBP1.16□□□□□ -2.22
CCDC38-208ENST00000549876 K7ERU9 68 aa1.16□□□□□ -2.22
CCDC38-208ENST00000549876 M0R233 179 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms