RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 IGKV2-29A2NJV5 120 aaPredicted RBP1.5□□□□□ -2.17
SNRPF-202ENST00000549580 IGKV2D-40P01614 121 aaPredicted RBP1.5□□□□□ -2.17
SNRPF-202ENST00000549580 CXCL8P10145 99 aa1.5□□□□□ -2.17
SNRPF-202ENST00000549580 FABP4P15090 132 aa1.5□□□□□ -2.17
SNRPF-202ENST00000549580 CCDC153Q494R4 210 aa1.5□□□□□ -2.17
SNRPF-202ENST00000549580 TMEM14EPQ6UXP3 125 aa1.5□□□□□ -2.17
SNRPF-202ENST00000549580 ZNF833PQ6ZTB9 187 aa1.5□□□□□ -2.17
SNRPF-202ENST00000549580 TAF9BQ9HBM6 251 aa1.5□□□□□ -2.17
SNRPF-202ENST00000549580 CBLN4Q9NTU7 201 aa1.5□□□□□ -2.17
SNRPF-202ENST00000549580 TAS2R7Q9NYW3 318 aa1.5□□□□□ -2.17
SNRPF-202ENST00000549580 MYOFQ9NZM1 2061 aa1.5□□□□□ -2.17
SNRPF-202ENST00000549580 ARAP1Q96P48 1450 aa1.5□□□□□ -2.17
SNRPF-202ENST00000549580 KIAA1107Q9UPP5 1409 aa1.49□□□□□ -2.17
SNRPF-202ENST00000549580 IGKV3-7A0A075B6H7 116 aa1.49□□□□□ -2.17
SNRPF-202ENST00000549580 CCL16O15467 120 aa1.49□□□□□ -2.17
SNRPF-202ENST00000549580 HCRTO43612 131 aa1.49□□□□□ -2.17
SNRPF-202ENST00000549580 DBIP07108 87 aaKnown RBP1.49□□□□□ -2.17
SNRPF-202ENST00000549580 TPT1P13693 172 aaKnown RBP1.49□□□□□ -2.17
SNRPF-202ENST00000549580 IL9P15248 144 aa1.49□□□□□ -2.17
SNRPF-202ENST00000549580 GKN2Q86XP6 184 aa1.49□□□□□ -2.17
SNRPF-202ENST00000549580 LZICQ8WZA0 190 aa1.49□□□□□ -2.17
SNRPF-202ENST00000549580 OR4C12Q96R67 309 aa1.49□□□□□ -2.17
SNRPF-202ENST00000549580 CDC42SE1Q9NRR8 79 aa1.49□□□□□ -2.17
SNRPF-202ENST00000549580 ORMDL1Q9P0S3 153 aa1.49□□□□□ -2.17
SNRPF-202ENST00000549580 FRMPD1Q5SYB0 1578 aa1.49□□□□□ -2.17
SNRPF-202ENST00000549580 SCN3AQ9NY46 2000 aa1.49□□□□□ -2.17
SNRPF-202ENST00000549580 OVOS2A0A0G2JMS6 1433 aa1.49□□□□□ -2.17
SNRPF-202ENST00000549580 CEP192Q8TEP8 1941 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 DPM2O94777 84 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 CRYGSP22914 178 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 CMPK1P30085 196 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 RPL22P35268 128 aaKnown RBP1.48□□□□□ -2.17
SNRPF-202ENST00000549580 MAXP61244 160 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 LSM3P62310 102 aaKnown RBP1.48□□□□□ -2.17
SNRPF-202ENST00000549580 KRTAP21-3Q3LHN1 58 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 TEN1Q86WV5 123 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 OR5AS1Q8N127 324 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 MORN4Q8NDC4 146 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 CCL4L1Q8NHW4 92 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 Q8TAT8 98 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 BRK1Q8WUW1 75 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 PATE1Q8WXA2 126 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 MAFIPQ8WZ33 124 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 NIT2Q9NQR4 276 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 MYLKQ15746 1914 aa1.48□□□□□ -2.17
SNRPF-202ENST00000549580 LAMB4A4D0S4 1761 aa1.47□□□□□ -2.17
SNRPF-202ENST00000549580 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.47□□□□□ -2.17
SNRPF-202ENST00000549580 TMEM189A5PLL7 270 aa1.47□□□□□ -2.17
SNRPF-202ENST00000549580 C5orf67F2Z3F1 127 aa1.47□□□□□ -2.17
SNRPF-202ENST00000549580 M0QZK8 103 aa1.47□□□□□ -2.17
SNRPF-202ENST00000549580 ARPC5O15511 151 aa1.47□□□□□ -2.17
SNRPF-202ENST00000549580 SCTP09683 121 aa1.47□□□□□ -2.17
SNRPF-202ENST00000549580 SDC4P31431 198 aa1.47□□□□□ -2.17
SNRPF-202ENST00000549580 MPV17LQ2QL34 196 aa1.47□□□□□ -2.17
SNRPF-202ENST00000549580 OR5A2Q8NGI9 324 aa1.47□□□□□ -2.17
SNRPF-202ENST00000549580 OR51A4Q8NGJ6 313 aa1.47□□□□□ -2.17
SNRPF-202ENST00000549580 BORCS5Q969J3 196 aa1.47□□□□□ -2.17
SNRPF-202ENST00000549580 LINC00052Q96N35 136 aa1.47□□□□□ -2.17
SNRPF-202ENST00000549580 ARHGEF10O15013 1369 aa1.47□□□□□ -2.17
SNRPF-202ENST00000549580 DLC1Q96QB1 1528 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 MGAMO43451 1857 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 TCOF1Q13428 1488 aaKnown RBP1.46□□□□□ -2.18
SNRPF-202ENST00000549580 LOC110117498A0A087WWA1 95 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 A0A096LPI6 279 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 TRBV6-7A0A0A0MS04 114 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 TRBV6-4A0A1B0GX49 114 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 F8W1H4 67 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 M0R2N4 97 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 TNFSF15O95150 251 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 TRACP01848 142 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 SAA1P0DJI8 122 aaPredicted RBP1.46□□□□□ -2.18
SNRPF-202ENST00000549580 FOXA3P55318 350 aaPredicted RBP1.46□□□□□ -2.18
SNRPF-202ENST00000549580 DIAPH2-AS1Q14236 149 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 SMCO1Q147U7 214 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 KRTAP26-1Q6PEX3 210 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 TCTE3Q8IZS6 198 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 OR10AG1Q8NH19 301 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 OR5AK2Q8NH90 309 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 NAT14Q8WUY8 206 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 CST11Q9H112 138 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 GSKIPQ9P0R6 139 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 MED23Q9ULK4 1368 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 FER1L6Q2WGJ9 1857 aa1.46□□□□□ -2.18
SNRPF-202ENST00000549580 INTS1Q8N201 2190 aaKnown RBP1.45□□□□□ -2.18
SNRPF-202ENST00000549580 XIRP1Q702N8 1843 aaKnown RBP1.45□□□□□ -2.18
SNRPF-202ENST00000549580 C9orf170A2RU37 121 aa1.45□□□□□ -2.18
SNRPF-202ENST00000549580 C9JAW5 83 aa1.45□□□□□ -2.18
SNRPF-202ENST00000549580 GEMIN2O14893 280 aaKnown RBP1.45□□□□□ -2.18
SNRPF-202ENST00000549580 INE1O15225 51 aa1.45□□□□□ -2.18
SNRPF-202ENST00000549580 NUPR1O60356 82 aa1.45□□□□□ -2.18
SNRPF-202ENST00000549580 PAEPP09466 180 aa1.45□□□□□ -2.18
SNRPF-202ENST00000549580 COX7CP15954 63 aa1.45□□□□□ -2.18
SNRPF-202ENST00000549580 ARPC4P59998 168 aa1.45□□□□□ -2.18
SNRPF-202ENST00000549580 PSPHP78330 225 aa1.45□□□□□ -2.18
SNRPF-202ENST00000549580 CLEC2BQ92478 149 aa1.45□□□□□ -2.18
SNRPF-202ENST00000549580 CALML5Q9NZT1 146 aa1.45□□□□□ -2.18
SNRPF-202ENST00000549580 HIGD1AQ9Y241 93 aa1.45□□□□□ -2.18
SNRPF-202ENST00000549580 ARFGEF3Q5TH69 2177 aa1.45□□□□□ -2.18
SNRPF-202ENST00000549580 LAMB2P55268 1798 aa1.44□□□□□ -2.18
SNRPF-202ENST00000549580 FAM135BQ49AJ0 1406 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms