RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 SOCS3O14543 225 aa6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 ZNF253O75346 499 aa6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 IGFL4Q6B9Z1 124 aa6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 TCF24Q7RTU0 167 aa6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 C2CD4CQ8TF44 421 aa6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 GRAMD2BQ96HH9 432 aa6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 DERL1Q9BUN8 251 aa6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 PARLQ9H300 379 aa6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 OTORQ9NRC9 128 aa6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 CARHSP1Q9Y2V2 147 aaKnown RBP6.1□□□□□ -1.43
DEPDC4-207ENST00000549249 IGKV3-7A0A075B6H7 116 aa6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 KRBOX1C9JBD0 128 aa6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 F8W036 122 aa6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 M0R3E3 92 aa6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 OVOL1O14753 267 aa6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 PDE6DO43924 150 aa6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 SLC25A5P05141 298 aaKnown RBP6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 CEBPGP53567 150 aa6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 LYPD1Q8N2G4 141 aa6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 C5orf17Q8NAS9 161 aa6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 RPUSD4Q96CM3 377 aaKnown RBP6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 C20orf173Q96LM9 149 aa6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 SEC11CQ9BY50 192 aa6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 NKX6-2Q9C056 277 aaPredicted RBP6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 PEMTQ9UBM1 199 aa6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 EPDR1Q9UM22 224 aa6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 RPH3ALQ9UNE2 315 aa6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.09□□□□□ -1.43
DEPDC4-207ENST00000549249 SORL1Q92673 2214 aa6.09□□□□□ -1.44
DEPDC4-207ENST00000549249 TRBV20OR9-2A0A075B6H5 130 aa6.08□□□□□ -1.44
DEPDC4-207ENST00000549249 PEX7O00628 323 aa6.08□□□□□ -1.44
DEPDC4-207ENST00000549249 S100A1P23297 94 aa6.08□□□□□ -1.44
DEPDC4-207ENST00000549249 BMI1P35226 326 aa6.08□□□□□ -1.44
DEPDC4-207ENST00000549249 PSG9Q00887 426 aa6.08□□□□□ -1.44
DEPDC4-207ENST00000549249 GUCA2BQ16661 112 aa6.08□□□□□ -1.44
DEPDC4-207ENST00000549249 SOHLH1Q5JUK2 328 aa6.08□□□□□ -1.44
DEPDC4-207ENST00000549249 RNF182Q8N6D2 247 aa6.08□□□□□ -1.44
DEPDC4-207ENST00000549249 LINC00482Q8N8I6 264 aa6.08□□□□□ -1.44
DEPDC4-207ENST00000549249 DCANP1Q8TF63 244 aa6.08□□□□□ -1.44
DEPDC4-207ENST00000549249 SLC50A1Q9BRV3 221 aa6.08□□□□□ -1.44
DEPDC4-207ENST00000549249 KRTAP4-2Q9BYR5 136 aa6.08□□□□□ -1.44
DEPDC4-207ENST00000549249 NRN1Q9NPD7 142 aa6.08□□□□□ -1.44
DEPDC4-207ENST00000549249 AGRNO00468 2067 aa6.08□□□□□ -1.44
DEPDC4-207ENST00000549249 MGAM2Q2M2H8 2515 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 TRAV34A0A0B4J273 112 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 HELTA6NFD8 242 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 ZNF705FA8MVS1 300 aaPredicted RBP6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 DIRC3C9JPN6 131 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 PRAC2D3DTV9 90 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 K7EQG2 157 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 TCRAP04437 139 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 AKR1C3P42330 323 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 RPL35P42766 123 aaKnown RBP6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 MEOX2P50222 304 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 ZNF674Q2M3X9 581 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 DEFB114Q30KQ6 69 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 GOLT1AQ6ZVE7 132 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 TMEM61Q8N0U2 210 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 GBGT1Q8N5D6 347 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 FAM24BQ8N5W8 94 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 IGF2BP2-AS1Q96M15 143 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 LINC00479Q96M42 142 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 SMIM7Q9BQ49 75 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 TCEAL7Q9BRU2 100 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 ATG101Q9BSB4 218 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 ZNF747Q9BV97 191 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 MS4A6AQ9H2W1 248 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 AAMDCQ9H7C9 122 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 C19orf73Q9NVV2 129 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 SIGLEC8Q9NYZ4 499 aa6.07□□□□□ -1.44
DEPDC4-207ENST00000549249 IGKV2-40A0A087WW87 121 aaPredicted RBP6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 TRAV8-1A0A0A6YYK1 113 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 IZUMO1RA6ND01 250 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 PGPEP1LA6NFU8 196 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 ZNF727A8MUV8 499 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 M0QZ24 198 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 ISLRO14498 428 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 IGKV2D-40P01614 121 aaPredicted RBP6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 IGLV2-11P01706 119 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 APOC3P02656 99 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 TFPI2P48307 235 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 DEFB1P60022 68 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 RPL11P62913 178 aaKnown RBP6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 PSG3Q16557 428 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 CD300EQ496F6 205 aaPredicted RBP6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 ATRAIDQ6UW56 229 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 CMTM2Q8TAZ6 248 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 DYNLRB2Q8TF09 96 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 HIST1H2BAQ96A08 127 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 MRPL53Q96EL3 112 aaKnown RBP6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 C16orf92Q96LL3 132 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 SGK494Q96LW2 274 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 SDF2L1Q9HCN8 221 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 PRELID1Q9Y255 219 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 KLF12Q9Y4X4 402 aa6.06□□□□□ -1.44
DEPDC4-207ENST00000549249 TSPAN4O14817 238 aa6.05□□□□□ -1.44
DEPDC4-207ENST00000549249 IGLV2-8P01709 118 aa6.05□□□□□ -1.44
DEPDC4-207ENST00000549249 CNN1P51911 297 aaKnown RBP6.05□□□□□ -1.44
DEPDC4-207ENST00000549249 RPL23P62829 140 aaKnown RBP6.05□□□□□ -1.44
DEPDC4-207ENST00000549249 TMEM183BQ1AE95 376 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms