RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 FFAR4Q5NUL3 377 aa11.33□□□□□ -0.6
DDX54-205ENST00000548786 LINC00476Q8WZB0 136 aa11.33□□□□□ -0.6
DDX54-205ENST00000548786 NEU1Q99519 415 aa11.33□□□□□ -0.6
DDX54-205ENST00000548786 KCNIP2Q9NS61 270 aa11.33□□□□□ -0.6
DDX54-205ENST00000548786 TIMM9Q9Y5J7 89 aa11.33□□□□□ -0.6
DDX54-205ENST00000548786 IGLL5B9A064 214 aa11.32□□□□□ -0.6
DDX54-205ENST00000548786 J3KRW8 73 aa11.32□□□□□ -0.6
DDX54-205ENST00000548786 M0R3E3 92 aa11.32□□□□□ -0.6
DDX54-205ENST00000548786 OR10J4P0C629 311 aa11.32□□□□□ -0.6
DDX54-205ENST00000548786 C12orf74Q32Q52 190 aa11.32□□□□□ -0.6
DDX54-205ENST00000548786 Q5BKY6 102 aa11.32□□□□□ -0.6
DDX54-205ENST00000548786 OR10J6PQ8NGY7 276 aa11.32□□□□□ -0.6
DDX54-205ENST00000548786 C2CD4CQ8TF44 421 aa11.32□□□□□ -0.6
DDX54-205ENST00000548786 PLA2G2EQ9NZK7 142 aa11.32□□□□□ -0.6
DDX54-205ENST00000548786 TMEM14CQ9P0S9 112 aa11.32□□□□□ -0.6
DDX54-205ENST00000548786 SMIM9A6NGZ8 99 aa11.31□□□□□ -0.6
DDX54-205ENST00000548786 NDUFB4O95168 129 aa11.31□□□□□ -0.6
DDX54-205ENST00000548786 AMBPP02760 352 aa11.31□□□□□ -0.6
DDX54-205ENST00000548786 HIST1H1EP10412 219 aaKnown RBP11.31□□□□□ -0.6
DDX54-205ENST00000548786 HTN1P15515 57 aa11.31□□□□□ -0.6
DDX54-205ENST00000548786 KIR3DS1Q14943 382 aa11.31□□□□□ -0.6
DDX54-205ENST00000548786 RRN3P1Q2M238 152 aa11.31□□□□□ -0.6
DDX54-205ENST00000548786 EXOC3-AS1Q8N2X6 119 aa11.31□□□□□ -0.6
DDX54-205ENST00000548786 RPP25LQ8N5L8 163 aaKnown RBP11.31□□□□□ -0.6
DDX54-205ENST00000548786 FAM167A-AS1Q96KT0 104 aa11.31□□□□□ -0.6
DDX54-205ENST00000548786 FAM222AQ5U5X8 452 aa11.3□□□□□ -0.6
DDX54-205ENST00000548786 FUT9Q9Y231 359 aa11.3□□□□□ -0.6
DDX54-205ENST00000548786 YTHDF2Q9Y5A9 579 aaKnown RBP11.3□□□□□ -0.6
DDX54-205ENST00000548786 TRAV10A0A0B4J240 114 aa11.29□□□□□ -0.6
DDX54-205ENST00000548786 TMEM189A5PLL7 270 aa11.29□□□□□ -0.6
DDX54-205ENST00000548786 C11orf94C9JXX5 98 aa11.29□□□□□ -0.6
DDX54-205ENST00000548786 OR7C2O60412 319 aa11.29□□□□□ -0.6
DDX54-205ENST00000548786 SPART-AS1P0CW21 52 aa11.29□□□□□ -0.6
DDX54-205ENST00000548786 ERCC8Q13216 396 aa11.29□□□□□ -0.6
DDX54-205ENST00000548786 ICAM4Q14773 271 aa11.29□□□□□ -0.6
DDX54-205ENST00000548786 FAM122CQ6P4D5 195 aa11.29□□□□□ -0.6
DDX54-205ENST00000548786 LINC01587Q99440 93 aa11.29□□□□□ -0.6
DDX54-205ENST00000548786 PAXXQ9BUH6 204 aa11.29□□□□□ -0.6
DDX54-205ENST00000548786 MRPL32Q9BYC8 188 aaKnown RBP11.29□□□□□ -0.6
DDX54-205ENST00000548786 OR51M1Q9H341 326 aa11.29□□□□□ -0.6
DDX54-205ENST00000548786 DEFB131BA0A096LNP1 70 aa11.28□□□□□ -0.6
DDX54-205ENST00000548786 ZNF253O75346 499 aa11.28□□□□□ -0.6
DDX54-205ENST00000548786 GIPP09681 153 aaPredicted RBP11.28□□□□□ -0.6
DDX54-205ENST00000548786 CT45A10P0DMU9 189 aa11.28□□□□□ -0.6
DDX54-205ENST00000548786 HTN3P15516 51 aa11.28□□□□□ -0.6
DDX54-205ENST00000548786 AZU1P20160 251 aa11.28□□□□□ -0.6
DDX54-205ENST00000548786 CDKN1BP46527 198 aa11.28□□□□□ -0.6
DDX54-205ENST00000548786 FXYD5Q96DB9 178 aa11.28□□□□□ -0.6
DDX54-205ENST00000548786 PHYHIPLQ96FC7 376 aa11.28□□□□□ -0.6
DDX54-205ENST00000548786 DKK2Q9UBU2 259 aa11.28□□□□□ -0.6
DDX54-205ENST00000548786 IGKV2-40A0A087WW87 121 aaPredicted RBP11.27□□□□□ -0.61
DDX54-205ENST00000548786 FXYD6-FXYD2A0A087WZ82 144 aa11.27□□□□□ -0.61
DDX54-205ENST00000548786 IGKV2D-40P01614 121 aaPredicted RBP11.27□□□□□ -0.61
DDX54-205ENST00000548786 NBEAP1P0C6P0 100 aa11.27□□□□□ -0.61
DDX54-205ENST00000548786 RAB2AP61019 212 aa11.27□□□□□ -0.61
DDX54-205ENST00000548786 UBE2L3P68036 154 aaKnown RBP11.27□□□□□ -0.61
DDX54-205ENST00000548786 GFI1BQ5VTD9 330 aa11.27□□□□□ -0.61
DDX54-205ENST00000548786 HSD17B11Q8NBQ5 300 aa11.27□□□□□ -0.61
DDX54-205ENST00000548786 RNF141Q8WVD5 230 aa11.27□□□□□ -0.61
DDX54-205ENST00000548786 AAMDCQ9H7C9 122 aa11.27□□□□□ -0.61
DDX54-205ENST00000548786 VPS13DQ5THJ4 4388 aa11.26□□□□□ -0.61
DDX54-205ENST00000548786 NPIPB6E9PJ23 425 aa11.26□□□□□ -0.61
DDX54-205ENST00000548786 HMGB3O15347 200 aaKnown RBP11.26□□□□□ -0.61
DDX54-205ENST00000548786 PDE6HQ13956 83 aa11.26□□□□□ -0.61
DDX54-205ENST00000548786 OXA1LQ15070 435 aa11.26□□□□□ -0.61
DDX54-205ENST00000548786 ZNF503Q96F45 646 aa11.26□□□□□ -0.61
DDX54-205ENST00000548786 NIPSNAP3BQ9BS92 247 aa11.26□□□□□ -0.61
DDX54-205ENST00000548786 IGHV4-4A0A075B6R2 117 aa11.25□□□□□ -0.61
DDX54-205ENST00000548786 TSPOP30536 169 aa11.25□□□□□ -0.61
DDX54-205ENST00000548786 LEPP41159 167 aa11.25□□□□□ -0.61
DDX54-205ENST00000548786 RANP62826 216 aaKnown RBP11.25□□□□□ -0.61
DDX54-205ENST00000548786 OR2T35Q8NGX2 323 aa11.25□□□□□ -0.61
DDX54-205ENST00000548786 MRPL53Q96EL3 112 aaKnown RBP11.25□□□□□ -0.61
DDX54-205ENST00000548786 AQP10Q96PS8 301 aa11.25□□□□□ -0.61
DDX54-205ENST00000548786 APLNQ9ULZ1 77 aa11.25□□□□□ -0.61
DDX54-205ENST00000548786 TRAV12-3A0A0B4J271 114 aa11.24□□□□□ -0.61
DDX54-205ENST00000548786 DEFB130BP0DP73 79 aa11.24□□□□□ -0.61
DDX54-205ENST00000548786 DEFB130AP0DP74 79 aa11.24□□□□□ -0.61
DDX54-205ENST00000548786 DAD1P61803 113 aa11.24□□□□□ -0.61
DDX54-205ENST00000548786 ACOT6Q3I5F7 207 aaPredicted RBP11.24□□□□□ -0.61
DDX54-205ENST00000548786 KHDC3LQ587J8 217 aa11.24□□□□□ -0.61
DDX54-205ENST00000548786 TMEM256Q8N2U0 113 aa11.24□□□□□ -0.61
DDX54-205ENST00000548786 INO80EQ8NBZ0 244 aaPredicted RBP11.24□□□□□ -0.61
DDX54-205ENST00000548786 AGPAT4-IT1Q9H0P7 198 aa11.24□□□□□ -0.61
DDX54-205ENST00000548786 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
DDX54-205ENST00000548786 A0A1W2PPV4 95 aa11.23□□□□□ -0.61
DDX54-205ENST00000548786 SMLR1H3BR10 107 aa11.23□□□□□ -0.61
DDX54-205ENST00000548786 M6PRP20645 277 aa11.23□□□□□ -0.61
DDX54-205ENST00000548786 TAS2R45P59539 299 aa11.23□□□□□ -0.61
DDX54-205ENST00000548786 TAS2R60P59551 318 aa11.23□□□□□ -0.61
DDX54-205ENST00000548786 ZNF266Q14584 549 aa11.23□□□□□ -0.61
DDX54-205ENST00000548786 OR10G4Q8NGN3 311 aa11.23□□□□□ -0.61
DDX54-205ENST00000548786 OR10G9Q8NGN4 311 aa11.23□□□□□ -0.61
DDX54-205ENST00000548786 OR10G7Q8NGN6 311 aa11.23□□□□□ -0.61
DDX54-205ENST00000548786 HYLS1Q96M11 299 aa11.23□□□□□ -0.61
DDX54-205ENST00000548786 VGLL1Q99990 258 aa11.23□□□□□ -0.61
DDX54-205ENST00000548786 SH3BGRL3Q9H299 93 aa11.23□□□□□ -0.61
DDX54-205ENST00000548786 Q9H3A6 140 aa11.23□□□□□ -0.61
DDX54-205ENST00000548786 TEX48A0A1B0GUV7 120 aa11.22□□□□□ -0.61
DDX54-205ENST00000548786 PLAC8L1A1L4L8 177 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms