RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 WNK1Q9H4A3 2382 aa3.7□□□□□ -1.82
APP-217ENST00000548570 HUWE1Q7Z6Z7 4374 aaKnown RBP3.69□□□□□ -1.82
APP-217ENST00000548570 MGAM2Q2M2H8 2515 aa3.69□□□□□ -1.82
APP-217ENST00000548570 TRAV1-1A0A0B4J248 108 aa3.69□□□□□ -1.82
APP-217ENST00000548570 CTXND1A0A1B0GTU2 59 aa3.69□□□□□ -1.82
APP-217ENST00000548570 MAP1LC3B2A6NCE7 125 aa3.69□□□□□ -1.82
APP-217ENST00000548570 HELTA6NFD8 242 aa3.69□□□□□ -1.82
APP-217ENST00000548570 KNCNA6PVL3 124 aa3.69□□□□□ -1.82
APP-217ENST00000548570 ZNF705FA8MVS1 300 aaPredicted RBP3.69□□□□□ -1.82
APP-217ENST00000548570 GGTLC3B5MD39 225 aa3.69□□□□□ -1.82
APP-217ENST00000548570 UMAD1C9J7I0 102 aa3.69□□□□□ -1.82
APP-217ENST00000548570 F6UB75 175 aa3.69□□□□□ -1.82
APP-217ENST00000548570 M0R3E3 92 aa3.69□□□□□ -1.82
APP-217ENST00000548570 MBP02144 154 aa3.69□□□□□ -1.82
APP-217ENST00000548570 NMBP08949 121 aa3.69□□□□□ -1.82
APP-217ENST00000548570 GIG44P09565 113 aaPredicted RBP3.69□□□□□ -1.82
APP-217ENST00000548570 NBEAP1P0C6P0 100 aa3.69□□□□□ -1.82
APP-217ENST00000548570 ZNF688P0C7X2 276 aa3.69□□□□□ -1.82
APP-217ENST00000548570 ARL14EPLP0DKL9 152 aa3.69□□□□□ -1.82
APP-217ENST00000548570 MALP21145 153 aa3.69□□□□□ -1.82
APP-217ENST00000548570 GALR1P47211 349 aa3.69□□□□□ -1.82
APP-217ENST00000548570 DEFB131AP59861 70 aa3.69□□□□□ -1.82
APP-217ENST00000548570 GUCA2BQ16661 112 aa3.69□□□□□ -1.82
APP-217ENST00000548570 AKR1C8PQ5T2L2 129 aa3.69□□□□□ -1.82
APP-217ENST00000548570 LCN12Q6JVE5 192 aa3.69□□□□□ -1.82
APP-217ENST00000548570 RBPMS2Q6ZRY4 209 aaKnown RBP3.69□□□□□ -1.82
APP-217ENST00000548570 BPIFA4PQ86YQ2 179 aa3.69□□□□□ -1.82
APP-217ENST00000548570 APRG1Q8IVJ8 170 aa3.69□□□□□ -1.82
APP-217ENST00000548570 CCDC28AQ8IWP9 274 aa3.69□□□□□ -1.82
APP-217ENST00000548570 EXOC3-AS1Q8N2X6 119 aa3.69□□□□□ -1.82
APP-217ENST00000548570 DEFB125Q8N687 156 aa3.69□□□□□ -1.82
APP-217ENST00000548570 ZNF680Q8NEM1 530 aa3.69□□□□□ -1.82
APP-217ENST00000548570 STXBP6Q8NFX7 210 aa3.69□□□□□ -1.82
APP-217ENST00000548570 LYPD6BQ8NI32 183 aa3.69□□□□□ -1.82
APP-217ENST00000548570 FAM213BQ8TBF2 198 aa3.69□□□□□ -1.82
APP-217ENST00000548570 GRAMD2BQ96HH9 432 aa3.69□□□□□ -1.82
APP-217ENST00000548570 GPR82Q96P67 336 aa3.69□□□□□ -1.82
APP-217ENST00000548570 PAXXQ9BUH6 204 aa3.69□□□□□ -1.82
APP-217ENST00000548570 ACTR3CQ9C0K3 210 aaPredicted RBP3.69□□□□□ -1.82
APP-217ENST00000548570 MAP1LC3BQ9GZQ8 125 aa3.69□□□□□ -1.82
APP-217ENST00000548570 PRKDCP78527 4128 aaKnown RBP3.69□□□□□ -1.82
APP-217ENST00000548570 FBN3Q75N90 2809 aa3.69□□□□□ -1.82
APP-217ENST00000548570 A0A1B0GV50 99 aa3.68□□□□□ -1.82
APP-217ENST00000548570 GAGE10A6NGK3 116 aa3.68□□□□□ -1.82
APP-217ENST00000548570 ISLRO14498 428 aa3.68□□□□□ -1.82
APP-217ENST00000548570 OR7C2O60412 319 aa3.68□□□□□ -1.82
APP-217ENST00000548570 ZNF253O75346 499 aa3.68□□□□□ -1.82
APP-217ENST00000548570 CXorf1O96002 111 aa3.68□□□□□ -1.82
APP-217ENST00000548570 CD5P06127 495 aa3.68□□□□□ -1.82
APP-217ENST00000548570 ZNF705DP0CH99 300 aaPredicted RBP3.68□□□□□ -1.82
APP-217ENST00000548570 ZNF705BP0CI00 300 aaPredicted RBP3.68□□□□□ -1.82
APP-217ENST00000548570 PSMB3P49720 205 aa3.68□□□□□ -1.82
APP-217ENST00000548570 CD81P60033 236 aa3.68□□□□□ -1.82
APP-217ENST00000548570 EIF5AP63241 154 aaKnown RBP3.68□□□□□ -1.82
APP-217ENST00000548570 UBE2L3P68036 154 aaKnown RBP3.68□□□□□ -1.82
APP-217ENST00000548570 MAJINQ3KP22 176 aa3.68□□□□□ -1.82
APP-217ENST00000548570 KHDC3LQ587J8 217 aa3.68□□□□□ -1.82
APP-217ENST00000548570 PSMG4Q5JS54 123 aa3.68□□□□□ -1.82
APP-217ENST00000548570 DGAT2L7PQ6IED9 249 aa3.68□□□□□ -1.82
APP-217ENST00000548570 AMTNQ6UX39 209 aa3.68□□□□□ -1.82
APP-217ENST00000548570 DPPA3Q6W0C5 159 aa3.68□□□□□ -1.82
APP-217ENST00000548570 PQLC2Q6ZP29 291 aa3.68□□□□□ -1.82
APP-217ENST00000548570 SFT2D1Q8WV19 159 aa3.68□□□□□ -1.82
APP-217ENST00000548570 BLNKQ8WV28 456 aa3.68□□□□□ -1.82
APP-217ENST00000548570 ASCL2Q99929 193 aa3.68□□□□□ -1.82
APP-217ENST00000548570 FAM110AQ9BQ89 295 aa3.68□□□□□ -1.82
APP-217ENST00000548570 CDIP1Q9H305 208 aa3.68□□□□□ -1.82
APP-217ENST00000548570 TMEM231Q9H6L2 316 aa3.68□□□□□ -1.82
APP-217ENST00000548570 NBEAL1Q6ZS30 2694 aa3.68□□□□□ -1.82
APP-217ENST00000548570 A0A0J9YX75 114 aa3.67□□□□□ -1.82
APP-217ENST00000548570 A0A1W2PPV4 95 aa3.67□□□□□ -1.82
APP-217ENST00000548570 A4D1N5 150 aa3.67□□□□□ -1.82
APP-217ENST00000548570 OR4C46A6NHA9 309 aa3.67□□□□□ -1.82
APP-217ENST00000548570 FAM74A7A6NL05 159 aa3.67□□□□□ -1.82
APP-217ENST00000548570 A8MTW9 85 aa3.67□□□□□ -1.82
APP-217ENST00000548570 A8MZ25 164 aa3.67□□□□□ -1.82
APP-217ENST00000548570 OR11H12B2RN74 326 aa3.67□□□□□ -1.82
APP-217ENST00000548570 C9JQL5 133 aa3.67□□□□□ -1.82
APP-217ENST00000548570 H3BMM0 161 aa3.67□□□□□ -1.82
APP-217ENST00000548570 TEX46H3BTG2 121 aa3.67□□□□□ -1.82
APP-217ENST00000548570 DNASE2O00115 360 aaPredicted RBP3.67□□□□□ -1.82
APP-217ENST00000548570 IGLV2-11P01706 119 aa3.67□□□□□ -1.82
APP-217ENST00000548570 IGHV4-30-4P0DP06 118 aa3.67□□□□□ -1.82
APP-217ENST00000548570 BMI1P35226 326 aa3.67□□□□□ -1.82
APP-217ENST00000548570 ATP5G3P48201 142 aa3.67□□□□□ -1.82
APP-217ENST00000548570 RAB5CP51148 216 aa3.67□□□□□ -1.82
APP-217ENST00000548570 RANP62826 216 aaKnown RBP3.67□□□□□ -1.82
APP-217ENST00000548570 GNG5P63218 68 aa3.67□□□□□ -1.82
APP-217ENST00000548570 SRSF3P84103 164 aaKnown RBP3.67□□□□□ -1.82
APP-217ENST00000548570 ERCC8Q13216 396 aa3.67□□□□□ -1.82
APP-217ENST00000548570 PDE6HQ13956 83 aa3.67□□□□□ -1.82
APP-217ENST00000548570 ICAM4Q14773 271 aa3.67□□□□□ -1.82
APP-217ENST00000548570 KIR3DS1Q14943 382 aa3.67□□□□□ -1.82
APP-217ENST00000548570 PSG3Q16557 428 aa3.67□□□□□ -1.82
APP-217ENST00000548570 GUK1Q16774 197 aa3.67□□□□□ -1.82
APP-217ENST00000548570 TRPT1Q86TN4 253 aaKnown RBP3.67□□□□□ -1.82
APP-217ENST00000548570 TVP23CQ96ET8 276 aa3.67□□□□□ -1.82
APP-217ENST00000548570 NARS2Q96I59 477 aaKnown RBP3.67□□□□□ -1.82
APP-217ENST00000548570 FAM19A4Q96LR4 140 aa3.67□□□□□ -1.82
APP-217ENST00000548570 LINC00479Q96M42 142 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms