RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 C16orf74Q96GX8 76 aa11.18□□□□□ -0.62
RAPGEF3-217ENST00000548434 FAM19A4Q96LR4 140 aa11.18□□□□□ -0.62
RAPGEF3-217ENST00000548434 ODF3Q96PU9 254 aa11.18□□□□□ -0.62
RAPGEF3-217ENST00000548434 LYRM2Q9NU23 88 aaPredicted RBP11.18□□□□□ -0.62
RAPGEF3-217ENST00000548434 NDUFA13Q9P0J0 144 aa11.18□□□□□ -0.62
RAPGEF3-217ENST00000548434 LSM5Q9Y4Y9 91 aaKnown RBP11.18□□□□□ -0.62
RAPGEF3-217ENST00000548434 TIMM8BQ9Y5J9 83 aaPredicted RBP11.18□□□□□ -0.62
RAPGEF3-217ENST00000548434 NPIPB6E9PJ23 425 aa11.17□□□□□ -0.62
RAPGEF3-217ENST00000548434 H7BYZ3 331 aa11.17□□□□□ -0.62
RAPGEF3-217ENST00000548434 COX7A2P2O60397 106 aa11.17□□□□□ -0.62
RAPGEF3-217ENST00000548434 ZNF253O75346 499 aa11.17□□□□□ -0.62
RAPGEF3-217ENST00000548434 ATP5G1P05496 136 aa11.17□□□□□ -0.62
RAPGEF3-217ENST00000548434 ATP5G3P48201 142 aa11.17□□□□□ -0.62
RAPGEF3-217ENST00000548434 RAB32Q13637 225 aa11.17□□□□□ -0.62
RAPGEF3-217ENST00000548434 UBE2DNLQ8IWF7 75 aa11.17□□□□□ -0.62
RAPGEF3-217ENST00000548434 LRRC20Q8TCA0 184 aa11.17□□□□□ -0.62
RAPGEF3-217ENST00000548434 TMEM263Q8WUH6 116 aaKnown RBP11.17□□□□□ -0.62
RAPGEF3-217ENST00000548434 NOP10Q9NPE3 64 aaKnown RBP11.17□□□□□ -0.62
RAPGEF3-217ENST00000548434 PXMP4Q9Y6I8 212 aa11.17□□□□□ -0.62
RAPGEF3-217ENST00000548434 H2AFB2P0C5Z0 115 aa11.16□□□□□ -0.62
RAPGEF3-217ENST00000548434 SULT1A1P50225 295 aa11.16□□□□□ -0.62
RAPGEF3-217ENST00000548434 LINC00299Q6ZSB3 139 aa11.16□□□□□ -0.62
RAPGEF3-217ENST00000548434 RNF141Q8WVD5 230 aa11.16□□□□□ -0.62
RAPGEF3-217ENST00000548434 CCDC32Q9BV29 185 aa11.16□□□□□ -0.62
RAPGEF3-217ENST00000548434 SLC39A9Q9NUM3 307 aa11.16□□□□□ -0.62
RAPGEF3-217ENST00000548434 UQCC1Q9NVA1 299 aa11.16□□□□□ -0.62
RAPGEF3-217ENST00000548434 LINC00588Q9Y4M8 146 aa11.16□□□□□ -0.62
RAPGEF3-217ENST00000548434 TRBV19A0A075B6N1 114 aa11.15□□□□□ -0.62
RAPGEF3-217ENST00000548434 C5orf51A6NDU8 294 aa11.15□□□□□ -0.62
RAPGEF3-217ENST00000548434 F5H768 121 aa11.15□□□□□ -0.62
RAPGEF3-217ENST00000548434 L7N2F9 121 aa11.15□□□□□ -0.62
RAPGEF3-217ENST00000548434 VAMP2P63027 116 aa11.15□□□□□ -0.62
RAPGEF3-217ENST00000548434 ZNF846Q147U1 533 aa11.15□□□□□ -0.62
RAPGEF3-217ENST00000548434 GUK1Q16774 197 aa11.15□□□□□ -0.62
RAPGEF3-217ENST00000548434 TMEM14CQ9P0S9 112 aa11.15□□□□□ -0.62
RAPGEF3-217ENST00000548434 FAM25EA8MYX2 175 aa11.14□□□□□ -0.63
RAPGEF3-217ENST00000548434 ZNF324O75467 553 aaPredicted RBP11.14□□□□□ -0.63
RAPGEF3-217ENST00000548434 HOXA5P20719 270 aa11.14□□□□□ -0.63
RAPGEF3-217ENST00000548434 S100A11P31949 105 aa11.14□□□□□ -0.63
RAPGEF3-217ENST00000548434 CAV2P51636 162 aa11.14□□□□□ -0.63
RAPGEF3-217ENST00000548434 C1orf134Q5TEV5 83 aa11.14□□□□□ -0.63
RAPGEF3-217ENST00000548434 MRPL53Q96EL3 112 aaKnown RBP11.14□□□□□ -0.63
RAPGEF3-217ENST00000548434 FAM167A-AS1Q96KT0 104 aa11.14□□□□□ -0.63
RAPGEF3-217ENST00000548434 NBDYA0A0U1RRE5 68 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 KLLNB2CW77 178 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 M0R3E3 92 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 HTN1P15515 57 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 BCAP31P51572 246 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 IFITM3Q01628 133 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 TNP2Q05952 138 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 DAZ2Q13117 558 aaKnown RBP11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 ASAH1Q13510 395 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 RAB31Q13636 194 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 GCSAMLQ5JQS6 135 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 Q6ZRG5 221 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 C11orf72Q8NBR9 251 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 OR1L4Q8NGR5 311 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 OR10J6PQ8NGY7 276 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 KRTAP4-5Q9BYR2 181 aa11.13□□□□□ -0.63
RAPGEF3-217ENST00000548434 H0YIZ8 118 aa11.12□□□□□ -0.63
RAPGEF3-217ENST00000548434 ATP6V1FQ16864 119 aa11.12□□□□□ -0.63
RAPGEF3-217ENST00000548434 ZNF575Q86XF7 245 aa11.12□□□□□ -0.63
RAPGEF3-217ENST00000548434 ZNF503Q96F45 646 aa11.12□□□□□ -0.63
RAPGEF3-217ENST00000548434 PFDN5Q99471 154 aa11.12□□□□□ -0.63
RAPGEF3-217ENST00000548434 LINC00467Q9BRT7 94 aa11.12□□□□□ -0.63
RAPGEF3-217ENST00000548434 KRTAP1-5Q9BYS1 174 aa11.12□□□□□ -0.63
RAPGEF3-217ENST00000548434 AGPAT4-IT1Q9H0P7 198 aa11.12□□□□□ -0.63
RAPGEF3-217ENST00000548434 PPP1R14DQ9NXH3 145 aa11.12□□□□□ -0.63
RAPGEF3-217ENST00000548434 UBE2L5PA0A1B0GUS4 154 aa11.11□□□□□ -0.63
RAPGEF3-217ENST00000548434 HIST1H1EP10412 219 aaKnown RBP11.11□□□□□ -0.63
RAPGEF3-217ENST00000548434 NHLH2Q02577 135 aa11.11□□□□□ -0.63
RAPGEF3-217ENST00000548434 ERCC8Q13216 396 aa11.11□□□□□ -0.63
RAPGEF3-217ENST00000548434 RXFP4Q8TDU9 374 aa11.11□□□□□ -0.63
RAPGEF3-217ENST00000548434 C18orf15Q96N68 181 aa11.11□□□□□ -0.63
RAPGEF3-217ENST00000548434 SLC25A2Q9BXI2 301 aa11.11□□□□□ -0.63
RAPGEF3-217ENST00000548434 TRAV12-3A0A0B4J271 114 aa11.1□□□□□ -0.63
RAPGEF3-217ENST00000548434 FAM240BA0A1B0GVZ2 78 aa11.1□□□□□ -0.63
RAPGEF3-217ENST00000548434 H3BNG1 76 aa11.1□□□□□ -0.63
RAPGEF3-217ENST00000548434 NUDT3O95989 172 aa11.1□□□□□ -0.63
RAPGEF3-217ENST00000548434 PYYP10082 97 aa11.1□□□□□ -0.63
RAPGEF3-217ENST00000548434 CRISP2P16562 243 aa11.1□□□□□ -0.63
RAPGEF3-217ENST00000548434 CD300CQ08708 224 aa11.1□□□□□ -0.63
RAPGEF3-217ENST00000548434 PDE6HQ13956 83 aa11.1□□□□□ -0.63
RAPGEF3-217ENST00000548434 C9orf47Q6ZRZ4 202 aa11.1□□□□□ -0.63
RAPGEF3-217ENST00000548434 PYGO2Q9BRQ0 406 aa11.1□□□□□ -0.63
RAPGEF3-217ENST00000548434 NPCDR1Q9BY65 106 aa11.1□□□□□ -0.63
RAPGEF3-217ENST00000548434 MPDU1O75352 247 aa11.09□□□□□ -0.63
RAPGEF3-217ENST00000548434 SIX6O95475 246 aa11.09□□□□□ -0.63
RAPGEF3-217ENST00000548434 PVALBP20472 110 aaPredicted RBP11.09□□□□□ -0.63
RAPGEF3-217ENST00000548434 FGF7P21781 194 aa11.09□□□□□ -0.63
RAPGEF3-217ENST00000548434 LEPP41159 167 aa11.09□□□□□ -0.63
RAPGEF3-217ENST00000548434 BAXQ07812 192 aa11.09□□□□□ -0.63
RAPGEF3-217ENST00000548434 ESRGQ1W209 222 aa11.09□□□□□ -0.63
RAPGEF3-217ENST00000548434 Q6ZQT7 251 aa11.09□□□□□ -0.63
RAPGEF3-217ENST00000548434 ZFAND2AQ8N6M9 145 aa11.09□□□□□ -0.63
RAPGEF3-217ENST00000548434 VSIG2Q96IQ7 327 aa11.09□□□□□ -0.63
RAPGEF3-217ENST00000548434 OR5AC2Q9NZP5 309 aa11.09□□□□□ -0.63
RAPGEF3-217ENST00000548434 TRAV26-1A0A087WT03 109 aa11.08□□□□□ -0.64
RAPGEF3-217ENST00000548434 GAGE12BA1L429 117 aa11.08□□□□□ -0.64
RAPGEF3-217ENST00000548434 GAGE7O76087 117 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms