RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 LYPD6BQ8NI32 183 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 C19orf73Q9NVV2 129 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 KNCNA6PVL3 124 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 PSG3Q16557 428 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 CST9LP1Q5W188 147 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 GTSCR1Q86UQ5 136 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 DEFB125Q8N687 156 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 ZNF738Q8NE65 137 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 AAMDCQ9H7C9 122 aa12.74□□□□□ -0.37
KRT4-201ENST00000548097 OR11H12B2RN74 326 aa12.73□□□□□ -0.37
KRT4-201ENST00000548097 ZNF253O75346 499 aa12.73□□□□□ -0.37
KRT4-201ENST00000548097 Q8N1Y9 231 aa12.73□□□□□ -0.37
KRT4-201ENST00000548097 CITED4Q96RK1 184 aa12.73□□□□□ -0.37
KRT4-201ENST00000548097 AGRNO00468 2067 aa12.72□□□□□ -0.37
KRT4-201ENST00000548097 RARRES2Q99969 163 aa12.72□□□□□ -0.37
KRT4-201ENST00000548097 RAB14P61106 215 aa12.72□□□□□ -0.37
KRT4-201ENST00000548097 RPUSD4Q96CM3 377 aaKnown RBP12.72□□□□□ -0.37
KRT4-201ENST00000548097 OTORQ9NRC9 128 aa12.72□□□□□ -0.37
KRT4-201ENST00000548097 A0A1W2PRE2 83 aa12.71□□□□□ -0.38
KRT4-201ENST00000548097 SLC25A5P05141 298 aaKnown RBP12.71□□□□□ -0.38
KRT4-201ENST00000548097 ACTL10Q5JWF8 245 aa12.71□□□□□ -0.38
KRT4-201ENST00000548097 IGKV2-40A0A087WW87 121 aaPredicted RBP12.7□□□□□ -0.38
KRT4-201ENST00000548097 IGKV2D-40P01614 121 aaPredicted RBP12.7□□□□□ -0.38
KRT4-201ENST00000548097 IGKV3-20P01619 116 aa12.7□□□□□ -0.38
KRT4-201ENST00000548097 LYPD1Q8N2G4 141 aa12.7□□□□□ -0.38
KRT4-201ENST00000548097 SGK494Q96LW2 274 aa12.7□□□□□ -0.38
KRT4-201ENST00000548097 ASCL2Q99929 193 aa12.7□□□□□ -0.38
KRT4-201ENST00000548097 ERCC8Q13216 396 aa12.69□□□□□ -0.38
KRT4-201ENST00000548097 KPRPQ5T749 579 aaPredicted RBP12.69□□□□□ -0.38
KRT4-201ENST00000548097 SAMD13Q5VXD3 122 aa12.69□□□□□ -0.38
KRT4-201ENST00000548097 AURKAIP1Q9NWT8 199 aaPredicted RBP12.69□□□□□ -0.38
KRT4-201ENST00000548097 C11orf94C9JXX5 98 aa12.69□□□□□ -0.38
KRT4-201ENST00000548097 TOR2AQ5JU69 321 aa12.69□□□□□ -0.38
KRT4-201ENST00000548097 CLLU1Q5K131 121 aa12.69□□□□□ -0.38
KRT4-201ENST00000548097 CMTM2Q8TAZ6 248 aa12.69□□□□□ -0.38
KRT4-201ENST00000548097 MANBALQ9NQG1 85 aa12.69□□□□□ -0.38
KRT4-201ENST00000548097 BCL2P10415 239 aa12.68□□□□□ -0.38
KRT4-201ENST00000548097 HIST1H1AQ02539 215 aaPredicted RBP12.68□□□□□ -0.38
KRT4-201ENST00000548097 CCDC28AQ8IWP9 274 aa12.68□□□□□ -0.38
KRT4-201ENST00000548097 RXFP4Q8TDU9 374 aa12.68□□□□□ -0.38
KRT4-201ENST00000548097 LINC00479Q96M42 142 aa12.68□□□□□ -0.38
KRT4-201ENST00000548097 RBFOX3A6NFN3 312 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 DIRC3C9JPN6 131 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 PPT1P50897 306 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 SRSF3P84103 164 aaKnown RBP12.67□□□□□ -0.38
KRT4-201ENST00000548097 GOLT1AQ6ZVE7 132 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 OR4B1Q8NGF8 309 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 VGLL1Q99990 258 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 SAV1Q9H4B6 383 aaPredicted RBP12.67□□□□□ -0.38
KRT4-201ENST00000548097 SRD5A3Q9H8P0 318 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 EPDR1Q9UM22 224 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 TRAV8-1A0A0A6YYK1 113 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 A0A0J9YX75 114 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 LOC102723971A0A1B0GUV8 181 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 SCO2A0A1W2PP80 73 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 IFNA1P01562 189 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 CSN1S1P47710 185 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 OR8A1Q8NGG7 326 aa12.67□□□□□ -0.38
KRT4-201ENST00000548097 EIF5A2Q9GZV4 153 aaKnown RBP12.67□□□□□ -0.38
KRT4-201ENST00000548097 TCRAP04437 139 aa12.66□□□□□ -0.38
KRT4-201ENST00000548097 RPL35AP18077 110 aaKnown RBP12.66□□□□□ -0.38
KRT4-201ENST00000548097 CNN1P51911 297 aaKnown RBP12.66□□□□□ -0.38
KRT4-201ENST00000548097 EBLN2Q6P2I7 272 aa12.66□□□□□ -0.38
KRT4-201ENST00000548097 FOXI2Q6ZQN5 318 aa12.66□□□□□ -0.38
KRT4-201ENST00000548097 C5orf17Q8NAS9 161 aa12.66□□□□□ -0.38
KRT4-201ENST00000548097 ZMAT5Q9UDW3 170 aaKnown RBP12.66□□□□□ -0.38
KRT4-201ENST00000548097 PRELID1Q9Y255 219 aa12.66□□□□□ -0.38
KRT4-201ENST00000548097 TRAV34A0A0B4J273 112 aa12.65□□□□□ -0.38
KRT4-201ENST00000548097 K7EIL1 84 aa12.65□□□□□ -0.38
KRT4-201ENST00000548097 IGHV4-30-4P0DP06 118 aa12.65□□□□□ -0.38
KRT4-201ENST00000548097 MEF2BQ02080 365 aaPredicted RBP12.65□□□□□ -0.38
KRT4-201ENST00000548097 MRPL53Q96EL3 112 aaKnown RBP12.65□□□□□ -0.38
KRT4-201ENST00000548097 FAM110AQ9BQ89 295 aa12.65□□□□□ -0.38
KRT4-201ENST00000548097 CLEC5AQ9NY25 188 aa12.65□□□□□ -0.38
KRT4-201ENST00000548097 VAX2Q9UIW0 290 aa12.65□□□□□ -0.38
KRT4-201ENST00000548097 RBMY1BA6NDE4 496 aaKnown RBP12.65□□□□□ -0.39
KRT4-201ENST00000548097 RBMY1EA6NEQ0 496 aaKnown RBP12.65□□□□□ -0.39
KRT4-201ENST00000548097 H3BMM0 161 aa12.65□□□□□ -0.39
KRT4-201ENST00000548097 RBMY1DP0C7P1 496 aaKnown RBP12.65□□□□□ -0.39
KRT4-201ENST00000548097 CMC4P56277 68 aaPredicted RBP12.65□□□□□ -0.39
KRT4-201ENST00000548097 FXYD7P58549 80 aa12.65□□□□□ -0.39
KRT4-201ENST00000548097 STHQ8IWL8 128 aa12.65□□□□□ -0.39
KRT4-201ENST00000548097 Q8TAT8 98 aa12.65□□□□□ -0.39
KRT4-201ENST00000548097 ARL2-SNX15V9GYD0 113 aa12.65□□□□□ -0.39
KRT4-201ENST00000548097 LINC00862A6NCI5 91 aa12.64□□□□□ -0.39
KRT4-201ENST00000548097 PEX7O00628 323 aa12.64□□□□□ -0.39
KRT4-201ENST00000548097 HLA-DRB4P13762 266 aa12.64□□□□□ -0.39
KRT4-201ENST00000548097 PMS2P11Q13670 270 aa12.64□□□□□ -0.39
KRT4-201ENST00000548097 OR10J6PQ8NGY7 276 aa12.64□□□□□ -0.39
KRT4-201ENST00000548097 NKX6-2Q9C056 277 aaPredicted RBP12.64□□□□□ -0.39
KRT4-201ENST00000548097 AGPAT4-IT1Q9H0P7 198 aa12.64□□□□□ -0.39
KRT4-201ENST00000548097 HLA-DRB4X5D2U9 266 aa12.64□□□□□ -0.39
KRT4-201ENST00000548097 ZNF506Q5JVG8 444 aa12.63□□□□□ -0.39
KRT4-201ENST00000548097 ATG101Q9BSB4 218 aa12.63□□□□□ -0.39
KRT4-201ENST00000548097 DERL1Q9BUN8 251 aa12.63□□□□□ -0.39
KRT4-201ENST00000548097 TUBA4BQ9H853 241 aa12.63□□□□□ -0.39
KRT4-201ENST00000548097 C9JQL5 133 aa12.62□□□□□ -0.39
KRT4-201ENST00000548097 CEBPGP53567 150 aa12.62□□□□□ -0.39
KRT4-201ENST00000548097 SLC35B3Q9H1N7 401 aa12.62□□□□□ -0.39
KRT4-201ENST00000548097 J3KRW8 73 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms