RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 FUT9Q9Y231 359 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 PMS2P5A8MQ11 134 aa9.07□□□□□ -0.96
CCDC59-202ENST00000547758 PRAC2D3DTV9 90 aa9.07□□□□□ -0.96
CCDC59-202ENST00000547758 MRPS12O15235 138 aaKnown RBP9.07□□□□□ -0.96
CCDC59-202ENST00000547758 MED6O75586 246 aa9.07□□□□□ -0.96
CCDC59-202ENST00000547758 LINC00869P0C866 280 aa9.07□□□□□ -0.96
CCDC59-202ENST00000547758 ANXA3P12429 323 aa9.07□□□□□ -0.96
CCDC59-202ENST00000547758 PLP1P60201 277 aa9.07□□□□□ -0.96
CCDC59-202ENST00000547758 LCN15Q6UWW0 184 aa9.07□□□□□ -0.96
CCDC59-202ENST00000547758 C11orf72Q8NBR9 251 aa9.07□□□□□ -0.96
CCDC59-202ENST00000547758 ZNF680Q8NEM1 530 aa9.07□□□□□ -0.96
CCDC59-202ENST00000547758 SLC50A1Q9BRV3 221 aa9.07□□□□□ -0.96
CCDC59-202ENST00000547758 VCX3AQ9NNX9 186 aa9.07□□□□□ -0.96
CCDC59-202ENST00000547758 FAM30AQ9NZY2 134 aa9.07□□□□□ -0.96
CCDC59-202ENST00000547758 PLA2G2DQ9UNK4 145 aa9.07□□□□□ -0.96
CCDC59-202ENST00000547758 SMCO3A2RU48 225 aa9.06□□□□□ -0.96
CCDC59-202ENST00000547758 ANXA7P20073 488 aaKnown RBP9.06□□□□□ -0.96
CCDC59-202ENST00000547758 EVI2AP22794 236 aa9.06□□□□□ -0.96
CCDC59-202ENST00000547758 LEPP41159 167 aa9.06□□□□□ -0.96
CCDC59-202ENST00000547758 MRPS10P82664 201 aaKnown RBP9.06□□□□□ -0.96
CCDC59-202ENST00000547758 S100A7AQ86SG5 101 aa9.06□□□□□ -0.96
CCDC59-202ENST00000547758 WFDC10BQ8IUB3 73 aa9.06□□□□□ -0.96
CCDC59-202ENST00000547758 CLVS1Q8IUQ0 354 aaPredicted RBP9.06□□□□□ -0.96
CCDC59-202ENST00000547758 SCGB3A2Q96PL1 93 aa9.06□□□□□ -0.96
CCDC59-202ENST00000547758 FUNDC2Q9BWH2 189 aa9.06□□□□□ -0.96
CCDC59-202ENST00000547758 PRO0255Q9UI72 69 aa9.06□□□□□ -0.96
CCDC59-202ENST00000547758 PIGBOS1A0A0B4J2F0 54 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 LINC00854A0A1B0GVQ3 168 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 DUXBA0A1W2PPF3 345 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 LRCOL1A6NCL2 159 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 WRBO00258 174 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 SYNGR2O43760 224 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 IGHV3-53P01767 116 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 SNRPCP09234 159 aaKnown RBP9.05□□□□□ -0.96
CCDC59-202ENST00000547758 CT45A10P0DMU9 189 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 SELENOTP62341 195 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 MRPL23Q16540 153 aaKnown RBP9.05□□□□□ -0.96
CCDC59-202ENST00000547758 SPANXN5Q5MJ07 72 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 NEGR1Q7Z3B1 354 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 ZNF431Q8TF32 576 aaPredicted RBP9.05□□□□□ -0.96
CCDC59-202ENST00000547758 SMIM4Q8WVI0 70 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 ST6GAL2Q96JF0 529 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 ODF3Q96PU9 254 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 RNF24Q9Y225 148 aa9.05□□□□□ -0.96
CCDC59-202ENST00000547758 H3BP45 60 aa9.04□□□□□ -0.96
CCDC59-202ENST00000547758 PSCAO43653 123 aa9.04□□□□□ -0.96
CCDC59-202ENST00000547758 SPINK4O60575 86 aa9.04□□□□□ -0.96
CCDC59-202ENST00000547758 C1QBP02746 253 aa9.04□□□□□ -0.96
CCDC59-202ENST00000547758 SLC25A6P12236 298 aa9.04□□□□□ -0.96
CCDC59-202ENST00000547758 CRYBA4P53673 196 aa9.04□□□□□ -0.96
CCDC59-202ENST00000547758 SLAQ13239 276 aa9.04□□□□□ -0.96
CCDC59-202ENST00000547758 TEPPQ6URK8 271 aa9.04□□□□□ -0.96
CCDC59-202ENST00000547758 ARL6Q9H0F7 186 aa9.04□□□□□ -0.96
CCDC59-202ENST00000547758 ARV1Q9H2C2 271 aa9.04□□□□□ -0.96
CCDC59-202ENST00000547758 SCP2D1Q9UJQ7 156 aa9.04□□□□□ -0.96
CCDC59-202ENST00000547758 A0A087WXM4 84 aa9.03□□□□□ -0.96
CCDC59-202ENST00000547758 SLC17A3O00476 420 aa9.03□□□□□ -0.96
CCDC59-202ENST00000547758 PRAF2O60831 178 aa9.03□□□□□ -0.96
CCDC59-202ENST00000547758 CRYGDP07320 174 aa9.03□□□□□ -0.96
CCDC59-202ENST00000547758 PATE2Q6UY27 113 aa9.03□□□□□ -0.96
CCDC59-202ENST00000547758 C10orf126Q8N4M7 172 aa9.03□□□□□ -0.96
CCDC59-202ENST00000547758 Q8N814 137 aa9.03□□□□□ -0.96
CCDC59-202ENST00000547758 ZBTB8BQ8NAP8 495 aaPredicted RBP9.03□□□□□ -0.96
CCDC59-202ENST00000547758 C8orf49Q96NF6 230 aa9.03□□□□□ -0.96
CCDC59-202ENST00000547758 KRTAP4-9Q9BYQ8 210 aa9.03□□□□□ -0.96
CCDC59-202ENST00000547758 HHLA3Q9XRX5 114 aa9.03□□□□□ -0.96
CCDC59-202ENST00000547758 STRAPQ9Y3F4 350 aaKnown RBP9.03□□□□□ -0.96
CCDC59-202ENST00000547758 KLF12Q9Y4X4 402 aa9.03□□□□□ -0.96
CCDC59-202ENST00000547758 H3BTX0 84 aa9.02□□□□□ -0.97
CCDC59-202ENST00000547758 ATP6V1G2O95670 118 aa9.02□□□□□ -0.97
CCDC59-202ENST00000547758 SLC25A5P05141 298 aaKnown RBP9.02□□□□□ -0.97
CCDC59-202ENST00000547758 TCL1AP56279 114 aa9.02□□□□□ -0.97
CCDC59-202ENST00000547758 ANXA2RQ3ZCQ2 193 aa9.02□□□□□ -0.97
CCDC59-202ENST00000547758 EIF4E3Q8N5X7 224 aaKnown RBP9.02□□□□□ -0.97
CCDC59-202ENST00000547758 VGLL1Q99990 258 aa9.02□□□□□ -0.97
CCDC59-202ENST00000547758 MIXL1Q9H2W2 232 aa9.02□□□□□ -0.97
CCDC59-202ENST00000547758 PXMP4Q9Y6I8 212 aa9.02□□□□□ -0.97
CCDC59-202ENST00000547758 C7orf71A4D174 169 aa9.01□□□□□ -0.97
CCDC59-202ENST00000547758 SRIP30626 198 aa9.01□□□□□ -0.97
CCDC59-202ENST00000547758 FHL2Q14192 279 aa9.01□□□□□ -0.97
CCDC59-202ENST00000547758 LINC00305Q7Z4B0 112 aa9.01□□□□□ -0.97
CCDC59-202ENST00000547758 BPIFA4PQ86YQ2 179 aa9.01□□□□□ -0.97
CCDC59-202ENST00000547758 LRTM2Q8N967 370 aa9.01□□□□□ -0.97
CCDC59-202ENST00000547758 MCUBQ9NWR8 336 aa9.01□□□□□ -0.97
CCDC59-202ENST00000547758 MRPL16Q9NX20 251 aaKnown RBP9.01□□□□□ -0.97
CCDC59-202ENST00000547758 PKHD1L1Q86WI1 4243 aa9.01□□□□□ -0.97
CCDC59-202ENST00000547758 ANKRD20A5PA0PJZ0 165 aa9□□□□□ -0.97
CCDC59-202ENST00000547758 E5RGE8 158 aa9□□□□□ -0.97
CCDC59-202ENST00000547758 K7EPK0 472 aa9□□□□□ -0.97
CCDC59-202ENST00000547758 K7EQD1 137 aa9□□□□□ -0.97
CCDC59-202ENST00000547758 CTDSPLO15194 276 aa9□□□□□ -0.97
CCDC59-202ENST00000547758 RGS5O15539 181 aa9□□□□□ -0.97
CCDC59-202ENST00000547758 IBA57Q5T440 356 aaKnown RBP9□□□□□ -0.97
CCDC59-202ENST00000547758 PXDC1Q5TGL8 231 aa9□□□□□ -0.97
CCDC59-202ENST00000547758 Q6ZSA8 131 aa9□□□□□ -0.97
CCDC59-202ENST00000547758 RABL2BQ9UNT1 228 aa9□□□□□ -0.97
CCDC59-202ENST00000547758 TMEM238LA0A1B0GVL6 79 aa8.99□□□□□ -0.97
CCDC59-202ENST00000547758 KLLNB2CW77 178 aa8.99□□□□□ -0.97
CCDC59-202ENST00000547758 OXTP01178 125 aa8.99□□□□□ -0.97
CCDC59-202ENST00000547758 IGLC2P0DOY2 106 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms