RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 GFI1BQ5VTD9 330 aa16.05■□□□□ 0.16
SMARCD1-204ENST00000547637 SPATA12Q7Z6I5 190 aa16.05■□□□□ 0.16
SMARCD1-204ENST00000547637 LINC00612Q8N6U2 182 aa16.05■□□□□ 0.16
SMARCD1-204ENST00000547637 PYGO2Q9BRQ0 406 aa16.05■□□□□ 0.16
SMARCD1-204ENST00000547637 UPK3BQ9BT76 320 aa16.05■□□□□ 0.16
SMARCD1-204ENST00000547637 Q9H3A6 140 aa16.05■□□□□ 0.16
SMARCD1-204ENST00000547637 PRB4P10163 310 aaPredicted RBP16.04■□□□□ 0.16
SMARCD1-204ENST00000547637 OR1L4Q8NGR5 311 aa16.04■□□□□ 0.16
SMARCD1-204ENST00000547637 ODF3Q96PU9 254 aa16.04■□□□□ 0.16
SMARCD1-204ENST00000547637 J3KRW8 73 aa16.03■□□□□ 0.16
SMARCD1-204ENST00000547637 CAMLGP49069 296 aa16.03■□□□□ 0.16
SMARCD1-204ENST00000547637 BCAP31P51572 246 aa16.03■□□□□ 0.16
SMARCD1-204ENST00000547637 C12orf45Q8N5I9 185 aaPredicted RBP16.03■□□□□ 0.16
SMARCD1-204ENST00000547637 TMEM37Q8WXS4 190 aa16.03■□□□□ 0.16
SMARCD1-204ENST00000547637 PFDN5Q99471 154 aa16.03■□□□□ 0.16
SMARCD1-204ENST00000547637 LINC00854A0A1B0GVQ3 168 aa16.02■□□□□ 0.16
SMARCD1-204ENST00000547637 C7orf66A4D0T2 115 aa16.02■□□□□ 0.16
SMARCD1-204ENST00000547637 KIR3DS1Q14943 382 aa16.02■□□□□ 0.16
SMARCD1-204ENST00000547637 OPCMLQ14982 345 aa16.02■□□□□ 0.16
SMARCD1-204ENST00000547637 MITD1Q8WV92 249 aa16.02■□□□□ 0.16
SMARCD1-204ENST00000547637 PARD6GQ9BYG4 376 aaPredicted RBP16.02■□□□□ 0.16
SMARCD1-204ENST00000547637 RCL1Q9Y2P8 373 aaKnown RBP16.02■□□□□ 0.16
SMARCD1-204ENST00000547637 TRAV12-3A0A0B4J271 114 aa16.01■□□□□ 0.15
SMARCD1-204ENST00000547637 PRAC2D3DTV9 90 aa16.01■□□□□ 0.15
SMARCD1-204ENST00000547637 H3BTX0 84 aa16.01■□□□□ 0.15
SMARCD1-204ENST00000547637 IGLC2P0DOY2 106 aa16.01■□□□□ 0.15
SMARCD1-204ENST00000547637 DAZ2Q13117 558 aaKnown RBP16.01■□□□□ 0.15
SMARCD1-204ENST00000547637 BAK1Q16611 211 aa16.01■□□□□ 0.15
SMARCD1-204ENST00000547637 ESRGQ1W209 222 aa16.01■□□□□ 0.15
SMARCD1-204ENST00000547637 MGST2Q99735 147 aa16.01■□□□□ 0.15
SMARCD1-204ENST00000547637 C20orf85Q9H1P6 137 aa16.01■□□□□ 0.15
SMARCD1-204ENST00000547637 MRPS16Q9Y3D3 137 aaKnown RBP16.01■□□□□ 0.15
SMARCD1-204ENST00000547637 TRGV2A0A075B6R0 118 aa16■□□□□ 0.15
SMARCD1-204ENST00000547637 SLC17A3O00476 420 aa16■□□□□ 0.15
SMARCD1-204ENST00000547637 MBPP02686 304 aaPredicted RBP16■□□□□ 0.15
SMARCD1-204ENST00000547637 HOXA5P20719 270 aa16■□□□□ 0.15
SMARCD1-204ENST00000547637 ARL16Q0P5N6 197 aa16■□□□□ 0.15
SMARCD1-204ENST00000547637 ZNF680Q8NEM1 530 aa16■□□□□ 0.15
SMARCD1-204ENST00000547637 SAT2Q96F10 170 aaPredicted RBP16■□□□□ 0.15
SMARCD1-204ENST00000547637 ZNF253O75346 499 aa15.99■□□□□ 0.15
SMARCD1-204ENST00000547637 SLC25A5P05141 298 aaKnown RBP15.99■□□□□ 0.15
SMARCD1-204ENST00000547637 CT45A10P0DMU9 189 aa15.99■□□□□ 0.15
SMARCD1-204ENST00000547637 PVALBP20472 110 aaPredicted RBP15.99■□□□□ 0.15
SMARCD1-204ENST00000547637 CAV2P51636 162 aa15.99■□□□□ 0.15
SMARCD1-204ENST00000547637 NRARPQ7Z6K4 114 aa15.99■□□□□ 0.15
SMARCD1-204ENST00000547637 Q8N1X5 172 aa15.99■□□□□ 0.15
SMARCD1-204ENST00000547637 ZNF431Q8TF32 576 aaPredicted RBP15.99■□□□□ 0.15
SMARCD1-204ENST00000547637 NPIPB6E9PJ23 425 aa15.98■□□□□ 0.15
SMARCD1-204ENST00000547637 H3BQ15 152 aa15.98■□□□□ 0.15
SMARCD1-204ENST00000547637 UQCC1Q9NVA1 299 aa15.98■□□□□ 0.15
SMARCD1-204ENST00000547637 LSM5Q9Y4Y9 91 aaKnown RBP15.98■□□□□ 0.15
SMARCD1-204ENST00000547637 FAM25EA8MYX2 175 aa15.97■□□□□ 0.15
SMARCD1-204ENST00000547637 MORN5Q5VZ52 161 aa15.97■□□□□ 0.15
SMARCD1-204ENST00000547637 MRPL53Q96EL3 112 aaKnown RBP15.97■□□□□ 0.15
SMARCD1-204ENST00000547637 PRELID1Q9Y255 219 aa15.97■□□□□ 0.15
SMARCD1-204ENST00000547637 MIC13Q5XKP0 118 aa15.96■□□□□ 0.15
SMARCD1-204ENST00000547637 Q6ZTI0 123 aa15.96■□□□□ 0.15
SMARCD1-204ENST00000547637 LINC00477Q96M19 166 aa15.96■□□□□ 0.15
SMARCD1-204ENST00000547637 TMPRSS5Q9H3S3 457 aa15.96■□□□□ 0.15
SMARCD1-204ENST00000547637 SCRT2Q9NQ03 307 aa15.96■□□□□ 0.15
SMARCD1-204ENST00000547637 ZNF586Q9NXT0 402 aa15.96■□□□□ 0.15
SMARCD1-204ENST00000547637 C7orf71A4D174 169 aa15.95■□□□□ 0.14
SMARCD1-204ENST00000547637 C5orf51A6NDU8 294 aa15.95■□□□□ 0.14
SMARCD1-204ENST00000547637 EREGO14944 169 aa15.95■□□□□ 0.14
SMARCD1-204ENST00000547637 CST7O76096 145 aa15.95■□□□□ 0.14
SMARCD1-204ENST00000547637 S100A11P31949 105 aa15.95■□□□□ 0.14
SMARCD1-204ENST00000547637 C18orf15Q96N68 181 aa15.95■□□□□ 0.14
SMARCD1-204ENST00000547637 PTTG2Q9NZH5 202 aa15.95■□□□□ 0.14
SMARCD1-204ENST00000547637 TIMM9Q9Y5J7 89 aa15.95■□□□□ 0.14
SMARCD1-204ENST00000547637 TRAV5A0A0B4J249 113 aa15.94■□□□□ 0.14
SMARCD1-204ENST00000547637 RPL29P47914 159 aaKnown RBP15.94■□□□□ 0.14
SMARCD1-204ENST00000547637 HBG1P69891 147 aa15.94■□□□□ 0.14
SMARCD1-204ENST00000547637 HBG2P69892 147 aa15.94■□□□□ 0.14
SMARCD1-204ENST00000547637 BAXQ07812 192 aa15.94■□□□□ 0.14
SMARCD1-204ENST00000547637 EIF4E3Q8N5X7 224 aaKnown RBP15.94■□□□□ 0.14
SMARCD1-204ENST00000547637 KRTAP1-5Q9BYS1 174 aa15.94■□□□□ 0.14
SMARCD1-204ENST00000547637 GSN-AS1Q9NRJ2 163 aa15.94■□□□□ 0.14
SMARCD1-204ENST00000547637 SLC39A9Q9NUM3 307 aa15.94■□□□□ 0.14
SMARCD1-204ENST00000547637 WDR83OSQ9Y284 106 aa15.94■□□□□ 0.14
SMARCD1-204ENST00000547637 TRGV1A0A0A0MS02 117 aa15.93■□□□□ 0.14
SMARCD1-204ENST00000547637 BTCP35070 178 aa15.93■□□□□ 0.14
SMARCD1-204ENST00000547637 PDE6HQ13956 83 aa15.93■□□□□ 0.14
SMARCD1-204ENST00000547637 STX12Q86Y82 276 aa15.93■□□□□ 0.14
SMARCD1-204ENST00000547637 AAMDCQ9H7C9 122 aa15.93■□□□□ 0.14
SMARCD1-204ENST00000547637 FUT9Q9Y231 359 aa15.93■□□□□ 0.14
SMARCD1-204ENST00000547637 TRBV19A0A075B6N1 114 aa15.92■□□□□ 0.14
SMARCD1-204ENST00000547637 CCSO14618 274 aa15.92■□□□□ 0.14
SMARCD1-204ENST00000547637 SIVA1O15304 175 aa15.92■□□□□ 0.14
SMARCD1-204ENST00000547637 GPX1P07203 203 aa15.92■□□□□ 0.14
SMARCD1-204ENST00000547637 HIST1H1EP10412 219 aaKnown RBP15.92■□□□□ 0.14
SMARCD1-204ENST00000547637 ANXA2RQ3ZCQ2 193 aa15.92■□□□□ 0.14
SMARCD1-204ENST00000547637 LINC00467Q9BRT7 94 aa15.92■□□□□ 0.14
SMARCD1-204ENST00000547637 HSPG2P98160 4391 aa15.92■□□□□ 0.14
SMARCD1-204ENST00000547637 A0A096LPF7 62 aa15.91■□□□□ 0.14
SMARCD1-204ENST00000547637 FAM24AA6NFZ4 105 aa15.91■□□□□ 0.14
SMARCD1-204ENST00000547637 MPDU1O75352 247 aa15.91■□□□□ 0.14
SMARCD1-204ENST00000547637 SULT1A1P50225 295 aa15.91■□□□□ 0.14
SMARCD1-204ENST00000547637 SLAQ13239 276 aa15.91■□□□□ 0.14
SMARCD1-204ENST00000547637 ATP6V1FQ16864 119 aa15.91■□□□□ 0.14
SMARCD1-204ENST00000547637 C2orf50Q96LR7 162 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms